| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is gluB [H]
Identifier: 169630134
GI number: 169630134
Start: 3103597
End: 3104619
Strand: Direct
Name: gluB [H]
Synonym: MAB_3051
Alternate gene names: 169630134
Gene position: 3103597-3104619 (Clockwise)
Preceding gene: 169630133
Following gene: 169630135
Centisome position: 61.25
GC content: 62.66
Gene sequence:
>1023_bases ATGAGCCGCCTGCGTGATGAAGATGCTCGGGTGATGAGGAGACGGCACACCGCACTGGTGGCGGCGTTGGCCTTGCTCGC CACACTGGTCAGCGCCTGCGGCAGCACCGAACCACGCCAACTACTCGGATCGATCCGCGGCGGCACGGTCATTCTCGGCA CCAAGTTCGACCAGCCTGGCGTAGGCCTGCAACATCCGGACAAGAAGATGAGCGGCTTCGACGTCAAGATCTCCGAGTAC GTCGTCAACGCGATCGCCGACGAGCTCGGGGTGAAGCACCCCACCATCCGTTGGTACGAGACGCCCTCCGCACAGCGCGA GCAGCTCATCGACAACGGCACCGTAGACATGATCGCCGGCAGCTATTCGGTCAATTACAGCCGCGCACAGAAAGTCTCGT TCGCCGGACCGTATCTCATCACGTATCAGGGGCTCTTGGTGCGCAAGGCGGATGATTCGCTAACCACGTTGGATGACCTG AACCGAGGCAAGAAGCTGTGCTCGGTCTCCGGCTCGACGCCGGCACAAAACGTCAAGAACCTGCTGCCGGGCACCCAGTT ACAGGAGTTCGATTCATACTCGTCGTGTGTCGAGGCGCTGCGACGCGGCAAGGTCGACGCGCTCACCACCGATGAGACGA TCTTGGCGGGATACGCCAAGCGCTACGAGGGCGAGTTCAAGCTGATTCAAATGAACTACGAGCTGAGCAAGCCGCTGTGT ATCGGAAATCCCAAGAGGCAACGGCGTAACGGGGACCCGTTCTCCCGTGAGGTGTACGGGATCGGCCTCGCCAGGGGCGA TACCGCGGCCATCGAGGCCATCGATCGCGCGCTCGACAAGATGATAGCCACCGGAGCCTGGGATTCCGATCTGCGAGAAG CACTCGGCGACAGCACGATCGATGGCTGGGAGAAGCGCGCCGAAAGCGGCACCTACGGACTGCGGCCCGACCCGTCACTG GCCGCGATCGAGAAGATCACCGGCACCAAGCCGGCGGCCGATCCAGCCTGCGGGGCCGCATGA
Upstream 100 bases:
>100_bases CCGACGGGGCAATCGTCGAGGACTCCGATCCGGAGAGCTTCTTCACGAACCCGAAGTCCGAACGCGCCAAGGATTTCCTC GGCAAGATCCTCGGACATTG
Downstream 100 bases:
>100_bases ACGCACTGTGGGCGAGCATGGGACCGCAGCTGTGGCCGGCATTCTGGACCACTCTCAGATTGACATTTTTCTCGGCGGTG GGCGCCTTGGTGTGGGGCAC
Product: putative glutamate ABC transporter, periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSRLRDEDARVMRRRHTALVAALALLATLVSACGSTEPRQLLGSIRGGTVILGTKFDQPGVGLQHPDKKMSGFDVKISEY VVNAIADELGVKHPTIRWYETPSAQREQLIDNGTVDMIAGSYSVNYSRAQKVSFAGPYLITYQGLLVRKADDSLTTLDDL NRGKKLCSVSGSTPAQNVKNLLPGTQLQEFDSYSSCVEALRRGKVDALTTDETILAGYAKRYEGEFKLIQMNYELSKPLC IGNPKRQRRNGDPFSREVYGIGLARGDTAAIEAIDRALDKMIATGAWDSDLREALGDSTIDGWEKRAESGTYGLRPDPSL AAIEKITGTKPAADPACGAA
Sequences:
>Translated_340_residues MSRLRDEDARVMRRRHTALVAALALLATLVSACGSTEPRQLLGSIRGGTVILGTKFDQPGVGLQHPDKKMSGFDVKISEY VVNAIADELGVKHPTIRWYETPSAQREQLIDNGTVDMIAGSYSVNYSRAQKVSFAGPYLITYQGLLVRKADDSLTTLDDL NRGKKLCSVSGSTPAQNVKNLLPGTQLQEFDSYSSCVEALRRGKVDALTTDETILAGYAKRYEGEFKLIQMNYELSKPLC IGNPKRQRRNGDPFSREVYGIGLARGDTAAIEAIDRALDKMIATGAWDSDLREALGDSTIDGWEKRAESGTYGLRPDPSL AAIEKITGTKPAADPACGAA >Mature_339_residues SRLRDEDARVMRRRHTALVAALALLATLVSACGSTEPRQLLGSIRGGTVILGTKFDQPGVGLQHPDKKMSGFDVKISEYV VNAIADELGVKHPTIRWYETPSAQREQLIDNGTVDMIAGSYSVNYSRAQKVSFAGPYLITYQGLLVRKADDSLTTLDDLN RGKKLCSVSGSTPAQNVKNLLPGTQLQEFDSYSSCVEALRRGKVDALTTDETILAGYAKRYEGEFKLIQMNYELSKPLCI GNPKRQRRNGDPFSREVYGIGLARGDTAAIEAIDRALDKMIATGAWDSDLREALGDSTIDGWEKRAESGTYGLRPDPSLA AIEKITGTKPAADPACGAA
Specific function: Part of the binding-protein-dependent transport system for glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=268, Percent_Identity=23.134328358209, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 36934; Mature: 36803
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLRDEDARVMRRRHTALVAALALLATLVSACGSTEPRQLLGSIRGGTVILGTKFDQPG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCC VGLQHPDKKMSGFDVKISEYVVNAIADELGVKHPTIRWYETPSAQREQLIDNGTVDMIAG CCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCEEEEEC SYSVNYSRAQKVSFAGPYLITYQGLLVRKADDSLTTLDDLNRGKKLCSVSGSTPAQNVKN CEECCHHHHHEECCCCCEEEEECCEEEEECCCCHHHHHHHHCCHHEEECCCCCCHHHHHH LLPGTQLQEFDSYSSCVEALRRGKVDALTTDETILAGYAKRYEGEFKLIQMNYELSKPLC HCCCCHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCEE IGNPKRQRRNGDPFSREVYGIGLARGDTAAIEAIDRALDKMIATGAWDSDLREALGDSTI CCCCHHHCCCCCCCCHHEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCH DGWEKRAESGTYGLRPDPSLAAIEKITGTKPAADPACGAA HHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SRLRDEDARVMRRRHTALVAALALLATLVSACGSTEPRQLLGSIRGGTVILGTKFDQPG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCC VGLQHPDKKMSGFDVKISEYVVNAIADELGVKHPTIRWYETPSAQREQLIDNGTVDMIAG CCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCEEEEEC SYSVNYSRAQKVSFAGPYLITYQGLLVRKADDSLTTLDDLNRGKKLCSVSGSTPAQNVKN CEECCHHHHHEECCCCCEEEEECCEEEEECCCCHHHHHHHHCCHHEEECCCCCCHHHHHH LLPGTQLQEFDSYSSCVEALRRGKVDALTTDETILAGYAKRYEGEFKLIQMNYELSKPLC HCCCCHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCEE IGNPKRQRRNGDPFSREVYGIGLARGDTAAIEAIDRALDKMIATGAWDSDLREALGDSTI CCCCHHHCCCCCCCCHHEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCH DGWEKRAESGTYGLRPDPSLAAIEKITGTKPAADPACGAA HHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7868586; 12948626 [H]