| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630093
Identifier: 169630093
GI number: 169630093
Start: 3068889
End: 3069830
Strand: Direct
Name: 169630093
Synonym: MAB_3010
Alternate gene names: NA
Gene position: 3068889-3069830 (Clockwise)
Preceding gene: 169630092
Following gene: 169630094
Centisome position: 60.56
GC content: 64.76
Gene sequence:
>942_bases ATGACCGCAACACTCGAGAAGGAAGTGACCGCACCCCAGCCGCCGCTGGACGGTGACGTCGCCGATCGCCGCAGCAAGTT CCGCAAACTGACGGCGGAGACGCCCAGGGATCCCAGCGCAGAACGCGCGTTCCTGGCATCGAAGCTGGCTGTGCTGCAAT CCCATCCGAAACTTTCGGCGGCTACCCGGTATGAAGGCGAGCAGACGCTGGCCGAGGCCGCGGGGCTGGCGGACAGCGCC CAGCTGGCCGCAGCGGTAGCCCCGCCGCCGGGCGGTGTCGGCTACGGGATGTTCTACACGAACAGCTTCCGCACCCGTTT CGCGCGGGGCACCGCGTTCTACTACGAGATCGTCTGCCCCCACCAGCCCGGCGGGAATGTGGCCGACTATCTGTATCTGA CCGCCACCAACCGGGCTCAGAAGGGTGTGGAGGCGTTTGTGTCGTACCACGCACAGGACATCGCCCGGTTCAAGGTGTTC GACTGGGCACGTTCGGACCACTGGCAGACCGATATCCCGTTCGCGAATCTGACGTCGTACCTGCGGAGCACCTCCTCACA CGGCTGGGGCCTGCAGACGCTGCTCGTGTGGAATCAATCATTCGAAATCGCCCCCAACCGGTGGCGCAACGAGGTGCTGC TGCACAACCGGGCGGCGAACCGCTGGGATCTGGTGTACCGCTTCGACTATCAGTCCTCCACCGCAGAACAGACGTCGGGC TGGGTGGGCAGCTGGGGTCCGATCGTGGAAACGTTCCAGAACAGCTACACGAACACCCGCTGGCTCGGGTTCCTGAACAC GATGCTGGTCGGCCGCGACGCGGCCGGCAACTGGGGACAATGGGCGCTGTTGCGTGCGGCCGACTCGACCGTACGCAATG ACGGGCACGGCTTCTCTCCGCTGTTCCTGGACCCGAACTACTCGTTCGTGGTCAAGAGTTGA
Upstream 100 bases:
>100_bases GTGAAATCGAGTAGCCCGCTACGCAGGTGAAGCGGCGGGCCGCGGCCACAGCATGGTTCCACCCCGGTGACAGTCATCGG GCGGAACCGAAGGACACGCC
Downstream 100 bases:
>100_bases CCGAGTAGGAAGTAGCCGTTCATGAAGAATGACGGATCATCTCCCCCTCCTGGTGGCGGTCCCATCGCCGACCGGCGCCG GCAGTTCGAAGAACTCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MTATLEKEVTAPQPPLDGDVADRRSKFRKLTAETPRDPSAERAFLASKLAVLQSHPKLSAATRYEGEQTLAEAAGLADSA QLAAAVAPPPGGVGYGMFYTNSFRTRFARGTAFYYEIVCPHQPGGNVADYLYLTATNRAQKGVEAFVSYHAQDIARFKVF DWARSDHWQTDIPFANLTSYLRSTSSHGWGLQTLLVWNQSFEIAPNRWRNEVLLHNRAANRWDLVYRFDYQSSTAEQTSG WVGSWGPIVETFQNSYTNTRWLGFLNTMLVGRDAAGNWGQWALLRAADSTVRNDGHGFSPLFLDPNYSFVVKS
Sequences:
>Translated_313_residues MTATLEKEVTAPQPPLDGDVADRRSKFRKLTAETPRDPSAERAFLASKLAVLQSHPKLSAATRYEGEQTLAEAAGLADSA QLAAAVAPPPGGVGYGMFYTNSFRTRFARGTAFYYEIVCPHQPGGNVADYLYLTATNRAQKGVEAFVSYHAQDIARFKVF DWARSDHWQTDIPFANLTSYLRSTSSHGWGLQTLLVWNQSFEIAPNRWRNEVLLHNRAANRWDLVYRFDYQSSTAEQTSG WVGSWGPIVETFQNSYTNTRWLGFLNTMLVGRDAAGNWGQWALLRAADSTVRNDGHGFSPLFLDPNYSFVVKS >Mature_312_residues TATLEKEVTAPQPPLDGDVADRRSKFRKLTAETPRDPSAERAFLASKLAVLQSHPKLSAATRYEGEQTLAEAAGLADSAQ LAAAVAPPPGGVGYGMFYTNSFRTRFARGTAFYYEIVCPHQPGGNVADYLYLTATNRAQKGVEAFVSYHAQDIARFKVFD WARSDHWQTDIPFANLTSYLRSTSSHGWGLQTLLVWNQSFEIAPNRWRNEVLLHNRAANRWDLVYRFDYQSSTAEQTSGW VGSWGPIVETFQNSYTNTRWLGFLNTMLVGRDAAGNWGQWALLRAADSTVRNDGHGFSPLFLDPNYSFVVKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34976; Mature: 34845
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATLEKEVTAPQPPLDGDVADRRSKFRKLTAETPRDPSAERAFLASKLAVLQSHPKLSA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCH ATRYEGEQTLAEAAGLADSAQLAAAVAPPPGGVGYGMFYTNSFRTRFARGTAFYYEIVCP HHHCCCHHHHHHHHCCCCCHHEEEEECCCCCCCEECEEEECCHHHHHHCCEEEEEEEEEC HQPGGNVADYLYLTATNRAQKGVEAFVSYHAQDIARFKVFDWARSDHWQTDIPFANLTSY CCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHH LRSTSSHGWGLQTLLVWNQSFEIAPNRWRNEVLLHNRAANRWDLVYRFDYQSSTAEQTSG HHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHCC WVGSWGPIVETFQNSYTNTRWLGFLNTMLVGRDAAGNWGQWALLRAADSTVRNDGHGFSP CCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCC LFLDPNYSFVVKS EEECCCCEEEEEC >Mature Secondary Structure TATLEKEVTAPQPPLDGDVADRRSKFRKLTAETPRDPSAERAFLASKLAVLQSHPKLSA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCH ATRYEGEQTLAEAAGLADSAQLAAAVAPPPGGVGYGMFYTNSFRTRFARGTAFYYEIVCP HHHCCCHHHHHHHHCCCCCHHEEEEECCCCCCCEECEEEECCHHHHHHCCEEEEEEEEEC HQPGGNVADYLYLTATNRAQKGVEAFVSYHAQDIARFKVFDWARSDHWQTDIPFANLTSY CCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHH LRSTSSHGWGLQTLLVWNQSFEIAPNRWRNEVLLHNRAANRWDLVYRFDYQSSTAEQTSG HHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHCC WVGSWGPIVETFQNSYTNTRWLGFLNTMLVGRDAAGNWGQWALLRAADSTVRNDGHGFSP CCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCC LFLDPNYSFVVKS EEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA