| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169630065
Identifier: 169630065
GI number: 169630065
Start: 3040760
End: 3042451
Strand: Reverse
Name: 169630065
Synonym: MAB_2982c
Alternate gene names: NA
Gene position: 3042451-3040760 (Counterclockwise)
Preceding gene: 169630066
Following gene: 169630064
Centisome position: 60.04
GC content: 58.63
Gene sequence:
>1692_bases ATGGTCATGAAGGATCGTTGGGCGATGTCTGCGGGTTTGCGGCGGGCATCGGCGCTGGCGGCGATTGTCGCCATGGCTGT CGGCGGAGCGAAGGTTGTCGATGACCACACCCTTCCTGGTAGTGGCTTTTCGGCCGTCGCGACCGTAGCCGCGGACCCAA CGGGGCCCACGGGCGGGGGGATGGGCCCTGGGGGTATGAACGGCTCTCAGTTCCAGCCACCGCAAATGCCCAGCTCGATG CCTGATTACCAGGGTGGCAACAACCAGCCGCCGCTGGATCAAAACAATGGCATCTCGATATACAACAGCGGTAGTCCGCA AGCGCCCCAACAGGTTCCAGGTCAGCAGGCCGGGCAGCAGCCCCAACAGGCGCAGCAGCCCGCTCATGGGACGCAGATAC CTGACTACCAAACCGCGACTCCCTACACTCAGGGGCCCGGTAAGCCGAATCCTGATTACCAGGCACCGCAACAGAATTCG CCACAACAGCCGCAACAGGGCCAACAGCCGCAACAGCAACAGCCGAACCAACAGCAGCCGCAGAACAAGCAGGACGATAC GACGCAGCAGTTGGATCAGCAGCAGCAACAGCGTCAGCAGCAGTGTCAGTCTGCGGCCGAGTATTACGGCATTGCTCAGC AGATGCTTAGTTTCATGGCTTCTGCGGCGGGCGGTGCCGGGTCGTTGTTCCAACAGCCCAGCCGCAAAGTTGGCCCCGGC GACGAATGTAACTGCGCACCTGAACAGGCCGGACCGCAAGACTCCGAGCCGTCGCAGGAGCCTTCTAACCAATCTGTATC GGATCGGAAAGTCAACTGCGAAGCGCCCCGGCAGACAGCCACGGGTGACGACTTGGACTTCAGCATCCCGAACACAGGCC GCAATCTAGGTGGGGATCCGGGCAAGATCGGGGAGCATCCGAAGCTTGACGGTGCGGACAATCCGCTCAATCCGCAGTTT CTTCCCAAGGACCAGCGTCCAATCCCGACTGGGACAGCTCTAGGACCGCAAGGTAAGCAATATGCGTTCTACAGCACGCC CAAATACCACAATCCCGACGGGACTCTCAACGAGCACTATGTGACGCCGAACTCCGCCATCGTCGATCTTGCTCATCCCG ACAAGATCATCGGCAACTCACCGTTGGCACAAACCAGCGGAGCATTTGATCCTAAGACAAACACCATGCTCTTAGCAGGG AACACGTCGGCAGATCCGGATACGACCGGTCGTGCGTTGTATCAATCTGCGCCGATCGACCCCAAGAACCCTAATAGCTG GATCAACGGCCCCTTTACGTATATCGGACCGCTGTTATCTGGAAGTCGGGAGAGTCAACTCATTGCTCTTGGCGCCAAGG GAGAAGATGGCTTCTTCTTCGCCGAGTCATCTGCAGGTCGGTCCGCTACGGGCGTCTTGGCGTCGACAGCCAAGGAACTC ACTGAGAAAACTGTGGGCGATGTCCTGGTAGAAAACGTTGTCAGTAATATCGGGGGTGTGGATGGGGTGTACGCGCCGAC CATCACAAAACAGGGCCTGGATTCTGCTACCAAGATGGGTAGTCTGGAGCTGAAAGTTAGCCAGTTCTGGGACCCCGCCT GGATGGCTGCTAACCGTGAAGCTGTTAACAACGGCACGGCGAAGGTGCCCTACAGTCCACGTATATACACGACTAACTGC ACGATTCAATAG
Upstream 100 bases:
>100_bases CAAACTTAATAGCTGGGGTTTTATCGACATGGCAACCATTTGTATGCAATGATCTGTCCAGGGGCGCGGTCAGCGTCAGC TGAAAGGGGCGGTTGTATCC
Downstream 100 bases:
>100_bases GAGAGCGTGATTATGAAGACACGAGTTTCATACGCATCTGCTGCATTTCTTGCACTAGCTATTTCGGCATGCTCTCAGTC CAATATTGCTTCTGCTGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 563; Mature: 563
Protein sequence:
>563_residues MVMKDRWAMSAGLRRASALAAIVAMAVGGAKVVDDHTLPGSGFSAVATVAADPTGPTGGGMGPGGMNGSQFQPPQMPSSM PDYQGGNNQPPLDQNNGISIYNSGSPQAPQQVPGQQAGQQPQQAQQPAHGTQIPDYQTATPYTQGPGKPNPDYQAPQQNS PQQPQQGQQPQQQQPNQQQPQNKQDDTTQQLDQQQQQRQQQCQSAAEYYGIAQQMLSFMASAAGGAGSLFQQPSRKVGPG DECNCAPEQAGPQDSEPSQEPSNQSVSDRKVNCEAPRQTATGDDLDFSIPNTGRNLGGDPGKIGEHPKLDGADNPLNPQF LPKDQRPIPTGTALGPQGKQYAFYSTPKYHNPDGTLNEHYVTPNSAIVDLAHPDKIIGNSPLAQTSGAFDPKTNTMLLAG NTSADPDTTGRALYQSAPIDPKNPNSWINGPFTYIGPLLSGSRESQLIALGAKGEDGFFFAESSAGRSATGVLASTAKEL TEKTVGDVLVENVVSNIGGVDGVYAPTITKQGLDSATKMGSLELKVSQFWDPAWMAANREAVNNGTAKVPYSPRIYTTNC TIQ
Sequences:
>Translated_563_residues MVMKDRWAMSAGLRRASALAAIVAMAVGGAKVVDDHTLPGSGFSAVATVAADPTGPTGGGMGPGGMNGSQFQPPQMPSSM PDYQGGNNQPPLDQNNGISIYNSGSPQAPQQVPGQQAGQQPQQAQQPAHGTQIPDYQTATPYTQGPGKPNPDYQAPQQNS PQQPQQGQQPQQQQPNQQQPQNKQDDTTQQLDQQQQQRQQQCQSAAEYYGIAQQMLSFMASAAGGAGSLFQQPSRKVGPG DECNCAPEQAGPQDSEPSQEPSNQSVSDRKVNCEAPRQTATGDDLDFSIPNTGRNLGGDPGKIGEHPKLDGADNPLNPQF LPKDQRPIPTGTALGPQGKQYAFYSTPKYHNPDGTLNEHYVTPNSAIVDLAHPDKIIGNSPLAQTSGAFDPKTNTMLLAG NTSADPDTTGRALYQSAPIDPKNPNSWINGPFTYIGPLLSGSRESQLIALGAKGEDGFFFAESSAGRSATGVLASTAKEL TEKTVGDVLVENVVSNIGGVDGVYAPTITKQGLDSATKMGSLELKVSQFWDPAWMAANREAVNNGTAKVPYSPRIYTTNC TIQ >Mature_563_residues MVMKDRWAMSAGLRRASALAAIVAMAVGGAKVVDDHTLPGSGFSAVATVAADPTGPTGGGMGPGGMNGSQFQPPQMPSSM PDYQGGNNQPPLDQNNGISIYNSGSPQAPQQVPGQQAGQQPQQAQQPAHGTQIPDYQTATPYTQGPGKPNPDYQAPQQNS PQQPQQGQQPQQQQPNQQQPQNKQDDTTQQLDQQQQQRQQQCQSAAEYYGIAQQMLSFMASAAGGAGSLFQQPSRKVGPG DECNCAPEQAGPQDSEPSQEPSNQSVSDRKVNCEAPRQTATGDDLDFSIPNTGRNLGGDPGKIGEHPKLDGADNPLNPQF LPKDQRPIPTGTALGPQGKQYAFYSTPKYHNPDGTLNEHYVTPNSAIVDLAHPDKIIGNSPLAQTSGAFDPKTNTMLLAG NTSADPDTTGRALYQSAPIDPKNPNSWINGPFTYIGPLLSGSRESQLIALGAKGEDGFFFAESSAGRSATGVLASTAKEL TEKTVGDVLVENVVSNIGGVDGVYAPTITKQGLDSATKMGSLELKVSQFWDPAWMAANREAVNNGTAKVPYSPRIYTTNC TIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59424; Mature: 59424
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMKDRWAMSAGLRRASALAAIVAMAVGGAKVVDDHTLPGSGFSAVATVAADPTGPTGGG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHEEEEECCCCCCCCCC MGPGGMNGSQFQPPQMPSSMPDYQGGNNQPPLDQNNGISIYNSGSPQAPQQVPGQQAGQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCHHHCCC PQQAQQPAHGTQIPDYQTATPYTQGPGKPNPDYQAPQQNSPQQPQQGQQPQQQQPNQQQP CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHCCCCCCC QNKQDDTTQQLDQQQQQRQQQCQSAAEYYGIAQQMLSFMASAAGGAGSLFQQPSRKVGPG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCC DECNCAPEQAGPQDSEPSQEPSNQSVSDRKVNCEAPRQTATGDDLDFSIPNTGRNLGGDP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC GKIGEHPKLDGADNPLNPQFLPKDQRPIPTGTALGPQGKQYAFYSTPKYHNPDGTLNEHY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCE VTPNSAIVDLAHPDKIIGNSPLAQTSGAFDPKTNTMLLAGNTSADPDTTGRALYQSAPID ECCCCCEEECCCCCHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCC PKNPNSWINGPFTYIGPLLSGSRESQLIALGAKGEDGFFFAESSAGRSATGVLASTAKEL CCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHH TEKTVGDVLVENVVSNIGGVDGVYAPTITKQGLDSATKMGSLELKVSQFWDPAWMAANRE HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCHHHHHCCCEEEEHHHHCCHHHHHCCHH AVNNGTAKVPYSPRIYTTNCTIQ HHCCCCEECCCCCEEEEECCEEC >Mature Secondary Structure MVMKDRWAMSAGLRRASALAAIVAMAVGGAKVVDDHTLPGSGFSAVATVAADPTGPTGGG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHEEEEECCCCCCCCCC MGPGGMNGSQFQPPQMPSSMPDYQGGNNQPPLDQNNGISIYNSGSPQAPQQVPGQQAGQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCHHHCCC PQQAQQPAHGTQIPDYQTATPYTQGPGKPNPDYQAPQQNSPQQPQQGQQPQQQQPNQQQP CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHCCCCCCC QNKQDDTTQQLDQQQQQRQQQCQSAAEYYGIAQQMLSFMASAAGGAGSLFQQPSRKVGPG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCC DECNCAPEQAGPQDSEPSQEPSNQSVSDRKVNCEAPRQTATGDDLDFSIPNTGRNLGGDP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC GKIGEHPKLDGADNPLNPQFLPKDQRPIPTGTALGPQGKQYAFYSTPKYHNPDGTLNEHY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCE VTPNSAIVDLAHPDKIIGNSPLAQTSGAFDPKTNTMLLAGNTSADPDTTGRALYQSAPID ECCCCCEEECCCCCHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCC PKNPNSWINGPFTYIGPLLSGSRESQLIALGAKGEDGFFFAESSAGRSATGVLASTAKEL CCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHH TEKTVGDVLVENVVSNIGGVDGVYAPTITKQGLDSATKMGSLELKVSQFWDPAWMAANRE HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCHHHHHCCCEEEEHHHHCCHHHHHCCHH AVNNGTAKVPYSPRIYTTNCTIQ HHCCCCEECCCCCEEEEECCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA