Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169630038

Identifier: 169630038

GI number: 169630038

Start: 3010076

End: 3010984

Strand: Direct

Name: 169630038

Synonym: MAB_2955

Alternate gene names: NA

Gene position: 3010076-3010984 (Clockwise)

Preceding gene: 169630037

Following gene: 169630039

Centisome position: 59.4

GC content: 62.49

Gene sequence:

>909_bases
ATGTATCTGGCGACCGCGATCCGGGCCGACGACCGTCAGTTCAGCACGTTGAACAACACCCTCCACGACTGTGCCCGCAT
TCTGGACGCTCCGGAGATCCCTGAGCTGTACGTCATCCAGGGCCCCTACGCCAACGCCTACACCATCGGAATGGACCGCC
CATTCATCGTGCTCACGTCCGGGTTGCTGGATCTGATGAACGAACAAGAGCTGCGTTTCATCGTCGGCCATGAACTGGGG
CATGCGCTTTCCGGGCATGCGGTGTACCGCACCATGCTCCTGCACTTGATGCGACTGGCCGGAAACCTGGGCTGGATGCC
CATTGGCGGGTGGGCGCTACGCGCCATCGTGGCCGCACTCATGGAGTGGCAGCGCAAGTCCGAGCTATCCGGCGACCGCG
CCGGCATGCTCTGCGGACAAGACGTCGACACCGCGATCCGCGTTGAAATGAAGCTGGCCGGGGGCTCCCGGTTGGACGAG
ATGGATACCCAGCGCTTCCTGGCACAGGCAGCAGAATACGAGCGCACCGGTGATATGCGTGACGGTGTGCTCAAGTTGCT
CAATCTCGAACTGCAGTCGCATCCGTTCTCGGTGATCCGCGCCGCCGAGCTCAGCAAGTGGATCGACCGCGGCGAATACG
GTGCGATCCTGAGCGGCGATTATCCCCTGCGCACAGATGACGAGCAGACCGACCTCGGATCTGAATTCCGCTCCGCGGCA
AGGTCCTACAAGGAGAACTTCGATTCCTCGACCGCCCCCCTCATCTCGGCCTTGCGGAACTTCGGATCCACCCTCGACGG
TGTGGTGAACGTTGTCGGCCAGGGCGTCACCGATGTCGCTACCGACGTCCGGCGCCGGTTCTCGGAGTGGCGCAACAACT
CCGATGACGAACCCGACGATGACACCTGA

Upstream 100 bases:

>100_bases
GCCGACCGGGCCGCACTGCAAACGCTTCGTAGTCTCAAGGGATTCGATAGCATCCTCAAAGCACTGGCAGCGCTGCTGCG
GGGAACGCCAGCACCGGCTG

Downstream 100 bases:

>100_bases
GCACGACAGCCTCCCCATCACGGGGATGCCGCCGGTTATTCGATGGCCCCCGCGGACACTTCCGAATACGCTCAAGTCCC
ATGACATCGGCTCTCGACCC

Product: hypothetical protein

Products: NA

Alternate protein names: M48 Family Peptidase; Peptidase M; M48A Family Peptidase; Zn-Dependent Protease; Zn-Dependent Protease With Chaperone Function; Metallopeptidase; Protease; Zn-Dependent Protease With Chaperone Function-Like Protein

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MYLATAIRADDRQFSTLNNTLHDCARILDAPEIPELYVIQGPYANAYTIGMDRPFIVLTSGLLDLMNEQELRFIVGHELG
HALSGHAVYRTMLLHLMRLAGNLGWMPIGGWALRAIVAALMEWQRKSELSGDRAGMLCGQDVDTAIRVEMKLAGGSRLDE
MDTQRFLAQAAEYERTGDMRDGVLKLLNLELQSHPFSVIRAAELSKWIDRGEYGAILSGDYPLRTDDEQTDLGSEFRSAA
RSYKENFDSSTAPLISALRNFGSTLDGVVNVVGQGVTDVATDVRRRFSEWRNNSDDEPDDDT

Sequences:

>Translated_302_residues
MYLATAIRADDRQFSTLNNTLHDCARILDAPEIPELYVIQGPYANAYTIGMDRPFIVLTSGLLDLMNEQELRFIVGHELG
HALSGHAVYRTMLLHLMRLAGNLGWMPIGGWALRAIVAALMEWQRKSELSGDRAGMLCGQDVDTAIRVEMKLAGGSRLDE
MDTQRFLAQAAEYERTGDMRDGVLKLLNLELQSHPFSVIRAAELSKWIDRGEYGAILSGDYPLRTDDEQTDLGSEFRSAA
RSYKENFDSSTAPLISALRNFGSTLDGVVNVVGQGVTDVATDVRRRFSEWRNNSDDEPDDDT
>Mature_302_residues
MYLATAIRADDRQFSTLNNTLHDCARILDAPEIPELYVIQGPYANAYTIGMDRPFIVLTSGLLDLMNEQELRFIVGHELG
HALSGHAVYRTMLLHLMRLAGNLGWMPIGGWALRAIVAALMEWQRKSELSGDRAGMLCGQDVDTAIRVEMKLAGGSRLDE
MDTQRFLAQAAEYERTGDMRDGVLKLLNLELQSHPFSVIRAAELSKWIDRGEYGAILSGDYPLRTDDEQTDLGSEFRSAA
RSYKENFDSSTAPLISALRNFGSTLDGVVNVVGQGVTDVATDVRRRFSEWRNNSDDEPDDDT

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33664; Mature: 33664

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLATAIRADDRQFSTLNNTLHDCARILDAPEIPELYVIQGPYANAYTIGMDRPFIVLTS
CCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCHHHHHH
GLLDLMNEQELRFIVGHELGHALSGHAVYRTMLLHLMRLAGNLGWMPIGGWALRAIVAAL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
MEWQRKSELSGDRAGMLCGQDVDTAIRVEMKLAGGSRLDEMDTQRFLAQAAEYERTGDMR
HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHH
DGVLKLLNLELQSHPFSVIRAAELSKWIDRGEYGAILSGDYPLRTDDEQTDLGSEFRSAA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHH
RSYKENFDSSTAPLISALRNFGSTLDGVVNVVGQGVTDVATDVRRRFSEWRNNSDDEPDD
HHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
DT
CC
>Mature Secondary Structure
MYLATAIRADDRQFSTLNNTLHDCARILDAPEIPELYVIQGPYANAYTIGMDRPFIVLTS
CCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCHHHHHH
GLLDLMNEQELRFIVGHELGHALSGHAVYRTMLLHLMRLAGNLGWMPIGGWALRAIVAAL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
MEWQRKSELSGDRAGMLCGQDVDTAIRVEMKLAGGSRLDEMDTQRFLAQAAEYERTGDMR
HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHH
DGVLKLLNLELQSHPFSVIRAAELSKWIDRGEYGAILSGDYPLRTDDEQTDLGSEFRSAA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHH
RSYKENFDSSTAPLISALRNFGSTLDGVVNVVGQGVTDVATDVRRRFSEWRNNSDDEPDD
HHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
DT
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA