| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630038
Identifier: 169630038
GI number: 169630038
Start: 3010076
End: 3010984
Strand: Direct
Name: 169630038
Synonym: MAB_2955
Alternate gene names: NA
Gene position: 3010076-3010984 (Clockwise)
Preceding gene: 169630037
Following gene: 169630039
Centisome position: 59.4
GC content: 62.49
Gene sequence:
>909_bases ATGTATCTGGCGACCGCGATCCGGGCCGACGACCGTCAGTTCAGCACGTTGAACAACACCCTCCACGACTGTGCCCGCAT TCTGGACGCTCCGGAGATCCCTGAGCTGTACGTCATCCAGGGCCCCTACGCCAACGCCTACACCATCGGAATGGACCGCC CATTCATCGTGCTCACGTCCGGGTTGCTGGATCTGATGAACGAACAAGAGCTGCGTTTCATCGTCGGCCATGAACTGGGG CATGCGCTTTCCGGGCATGCGGTGTACCGCACCATGCTCCTGCACTTGATGCGACTGGCCGGAAACCTGGGCTGGATGCC CATTGGCGGGTGGGCGCTACGCGCCATCGTGGCCGCACTCATGGAGTGGCAGCGCAAGTCCGAGCTATCCGGCGACCGCG CCGGCATGCTCTGCGGACAAGACGTCGACACCGCGATCCGCGTTGAAATGAAGCTGGCCGGGGGCTCCCGGTTGGACGAG ATGGATACCCAGCGCTTCCTGGCACAGGCAGCAGAATACGAGCGCACCGGTGATATGCGTGACGGTGTGCTCAAGTTGCT CAATCTCGAACTGCAGTCGCATCCGTTCTCGGTGATCCGCGCCGCCGAGCTCAGCAAGTGGATCGACCGCGGCGAATACG GTGCGATCCTGAGCGGCGATTATCCCCTGCGCACAGATGACGAGCAGACCGACCTCGGATCTGAATTCCGCTCCGCGGCA AGGTCCTACAAGGAGAACTTCGATTCCTCGACCGCCCCCCTCATCTCGGCCTTGCGGAACTTCGGATCCACCCTCGACGG TGTGGTGAACGTTGTCGGCCAGGGCGTCACCGATGTCGCTACCGACGTCCGGCGCCGGTTCTCGGAGTGGCGCAACAACT CCGATGACGAACCCGACGATGACACCTGA
Upstream 100 bases:
>100_bases GCCGACCGGGCCGCACTGCAAACGCTTCGTAGTCTCAAGGGATTCGATAGCATCCTCAAAGCACTGGCAGCGCTGCTGCG GGGAACGCCAGCACCGGCTG
Downstream 100 bases:
>100_bases GCACGACAGCCTCCCCATCACGGGGATGCCGCCGGTTATTCGATGGCCCCCGCGGACACTTCCGAATACGCTCAAGTCCC ATGACATCGGCTCTCGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: M48 Family Peptidase; Peptidase M; M48A Family Peptidase; Zn-Dependent Protease; Zn-Dependent Protease With Chaperone Function; Metallopeptidase; Protease; Zn-Dependent Protease With Chaperone Function-Like Protein
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MYLATAIRADDRQFSTLNNTLHDCARILDAPEIPELYVIQGPYANAYTIGMDRPFIVLTSGLLDLMNEQELRFIVGHELG HALSGHAVYRTMLLHLMRLAGNLGWMPIGGWALRAIVAALMEWQRKSELSGDRAGMLCGQDVDTAIRVEMKLAGGSRLDE MDTQRFLAQAAEYERTGDMRDGVLKLLNLELQSHPFSVIRAAELSKWIDRGEYGAILSGDYPLRTDDEQTDLGSEFRSAA RSYKENFDSSTAPLISALRNFGSTLDGVVNVVGQGVTDVATDVRRRFSEWRNNSDDEPDDDT
Sequences:
>Translated_302_residues MYLATAIRADDRQFSTLNNTLHDCARILDAPEIPELYVIQGPYANAYTIGMDRPFIVLTSGLLDLMNEQELRFIVGHELG HALSGHAVYRTMLLHLMRLAGNLGWMPIGGWALRAIVAALMEWQRKSELSGDRAGMLCGQDVDTAIRVEMKLAGGSRLDE MDTQRFLAQAAEYERTGDMRDGVLKLLNLELQSHPFSVIRAAELSKWIDRGEYGAILSGDYPLRTDDEQTDLGSEFRSAA RSYKENFDSSTAPLISALRNFGSTLDGVVNVVGQGVTDVATDVRRRFSEWRNNSDDEPDDDT >Mature_302_residues MYLATAIRADDRQFSTLNNTLHDCARILDAPEIPELYVIQGPYANAYTIGMDRPFIVLTSGLLDLMNEQELRFIVGHELG HALSGHAVYRTMLLHLMRLAGNLGWMPIGGWALRAIVAALMEWQRKSELSGDRAGMLCGQDVDTAIRVEMKLAGGSRLDE MDTQRFLAQAAEYERTGDMRDGVLKLLNLELQSHPFSVIRAAELSKWIDRGEYGAILSGDYPLRTDDEQTDLGSEFRSAA RSYKENFDSSTAPLISALRNFGSTLDGVVNVVGQGVTDVATDVRRRFSEWRNNSDDEPDDDT
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33664; Mature: 33664
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLATAIRADDRQFSTLNNTLHDCARILDAPEIPELYVIQGPYANAYTIGMDRPFIVLTS CCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCHHHHHH GLLDLMNEQELRFIVGHELGHALSGHAVYRTMLLHLMRLAGNLGWMPIGGWALRAIVAAL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH MEWQRKSELSGDRAGMLCGQDVDTAIRVEMKLAGGSRLDEMDTQRFLAQAAEYERTGDMR HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHH DGVLKLLNLELQSHPFSVIRAAELSKWIDRGEYGAILSGDYPLRTDDEQTDLGSEFRSAA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHH RSYKENFDSSTAPLISALRNFGSTLDGVVNVVGQGVTDVATDVRRRFSEWRNNSDDEPDD HHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC DT CC >Mature Secondary Structure MYLATAIRADDRQFSTLNNTLHDCARILDAPEIPELYVIQGPYANAYTIGMDRPFIVLTS CCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCHHHHHH GLLDLMNEQELRFIVGHELGHALSGHAVYRTMLLHLMRLAGNLGWMPIGGWALRAIVAAL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH MEWQRKSELSGDRAGMLCGQDVDTAIRVEMKLAGGSRLDEMDTQRFLAQAAEYERTGDMR HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHH DGVLKLLNLELQSHPFSVIRAAELSKWIDRGEYGAILSGDYPLRTDDEQTDLGSEFRSAA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHH RSYKENFDSSTAPLISALRNFGSTLDGVVNVVGQGVTDVATDVRRRFSEWRNNSDDEPDD HHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC DT CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA