| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629984
Identifier: 169629984
GI number: 169629984
Start: 2952694
End: 2953464
Strand: Direct
Name: 169629984
Synonym: MAB_2900
Alternate gene names: NA
Gene position: 2952694-2953464 (Clockwise)
Preceding gene: 169629973
Following gene: 169629986
Centisome position: 58.27
GC content: 66.41
Gene sequence:
>771_bases ATGCAGATAGCGATCTTGGCGTATCCCGGTATGACGGCCCTCGACGCGATCGGCCCCTACGAAATGCTCCGAGGTCTGCC GTCGGCGGAGTTTCGATTCGTGTGGCACCGGCCGGGGCCGATAGTGACCGACAGCGGTGTGCTGACGCTCGGCGCGACCC ATTCATTGACCGAGACGCCGGCTCCCGACATGGTCCTCGTTGGTGGCTCGATGCCCGCCACCCTGAGCACGGCCGCCGAC GAGCGGGTGCTGGACTGGCTGCGAAAGGTGCATGAAACCACGTCCTGGACCGCGTCGGTGTGCAGTGGATCGCTCATCCT GGGCGCGGCAGGGATTCTCCGCGGCAGGGACGCCACGTGTCATTGGGCCGGACAGCGTCTACTGGCCACCTTCGGCGCCA ATCCGCAGCGCGACAAGAGAATCGTCCGCGACGGCAAGGTGATCACCGCTGCCGGAGTGTCCGCGGGGCTTGACCTTGGA CTGTGGCTCGTCGGCGAAATCGCCGGACGGCCACGGGCTGAGGCAACCGCGCTGTGCATCGAGTACGACCCGCAGCCACC GTTCAATACCGGCCACATGAGCAAGGCATCGACCCGCAACAAGGCCGATGCGGTACGCGTGATCAAGGGCCTGCTCTCGG CACGCGATGCCGGCACAGAACTCGCGGCGGGTTCGAAGATGCTGTGGACGAACGCCATCGCCCGAATCAGGTCGACCGAC AGATCTGGCCATCGCCACGCACCGGGCCCGCTCAGGGCTGGCCGGGGTTGA
Upstream 100 bases:
>100_bases AACGCATGCGGGTGAGCCTATCGCGCTAATGGCAAGATCTCATCGGTCAGTGGCTATTTGGCCACTTCTACGGAAACGGC CACTGCACGACGATGTGTTG
Downstream 100 bases:
>100_bases GCTTCACAAACAGCGCGTCCGCTTCGGCGAGCACCTCGTCACCGTCCAGCAGCCGACCGGTCATGAATACCTTGCGCCCC TCAACGCGAGCCAGAGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: AraC Family Transcriptional Regulator; ThiJ/PfpI Domain Protein; Transcriptional Regulator; ThiJ/PfpI Family Protein; Transcriptional Regulator AraC Family; ThiJ/PfpI; DJ-1/PfpI Family Protein; Isonitrile Hydratase; ThiJ Family Protein; DJ-1/PfpI Family; DJ-1/PfpI Superfamily Protein; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; AraC Family Regulatory Helix-Turn-Helix Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; GATase1_AraC_1 Family Transcriptional Regulator; ThiH/PfpI Family Amidotransferase; Transcriptional Regulator Protein; Intracellular Protease/Amidase; Transcriptional Regulator AraC Type; AraC/XylS Family Transcriptional Regulator; ThiJ/PfpI Family Transcriptional Regulator Protein; Transcriptional Regulatory Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; AraC Family Transcription Regulator; Transcriptional Regulator ThiJ/PfpI Family Protein; Thij/Pfpi Family Protein; ThiJ/PfpI Family Transcriptional Regulator
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MQIAILAYPGMTALDAIGPYEMLRGLPSAEFRFVWHRPGPIVTDSGVLTLGATHSLTETPAPDMVLVGGSMPATLSTAAD ERVLDWLRKVHETTSWTASVCSGSLILGAAGILRGRDATCHWAGQRLLATFGANPQRDKRIVRDGKVITAAGVSAGLDLG LWLVGEIAGRPRAEATALCIEYDPQPPFNTGHMSKASTRNKADAVRVIKGLLSARDAGTELAAGSKMLWTNAIARIRSTD RSGHRHAPGPLRAGRG
Sequences:
>Translated_256_residues MQIAILAYPGMTALDAIGPYEMLRGLPSAEFRFVWHRPGPIVTDSGVLTLGATHSLTETPAPDMVLVGGSMPATLSTAAD ERVLDWLRKVHETTSWTASVCSGSLILGAAGILRGRDATCHWAGQRLLATFGANPQRDKRIVRDGKVITAAGVSAGLDLG LWLVGEIAGRPRAEATALCIEYDPQPPFNTGHMSKASTRNKADAVRVIKGLLSARDAGTELAAGSKMLWTNAIARIRSTD RSGHRHAPGPLRAGRG >Mature_256_residues MQIAILAYPGMTALDAIGPYEMLRGLPSAEFRFVWHRPGPIVTDSGVLTLGATHSLTETPAPDMVLVGGSMPATLSTAAD ERVLDWLRKVHETTSWTASVCSGSLILGAAGILRGRDATCHWAGQRLLATFGANPQRDKRIVRDGKVITAAGVSAGLDLG LWLVGEIAGRPRAEATALCIEYDPQPPFNTGHMSKASTRNKADAVRVIKGLLSARDAGTELAAGSKMLWTNAIARIRSTD RSGHRHAPGPLRAGRG
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27120; Mature: 27120
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIAILAYPGMTALDAIGPYEMLRGLPSAEFRFVWHRPGPIVTDSGVLTLGATHSLTETP CEEEEEECCCCHHHHHCCHHHHHHCCCCCCEEEEEECCCCEEECCCEEEECCCCCCCCCC APDMVLVGGSMPATLSTAADERVLDWLRKVHETTSWTASVCSGSLILGAAGILRGRDATC CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEHHHHHHCCCCCCC HWAGQRLLATFGANPQRDKRIVRDGKVITAAGVSAGLDLGLWLVGEIAGRPRAEATALCI HHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEE EYDPQPPFNTGHMSKASTRNKADAVRVIKGLLSARDAGTELAAGSKMLWTNAIARIRSTD EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHCC RSGHRHAPGPLRAGRG CCCCCCCCCCCCCCCC >Mature Secondary Structure MQIAILAYPGMTALDAIGPYEMLRGLPSAEFRFVWHRPGPIVTDSGVLTLGATHSLTETP CEEEEEECCCCHHHHHCCHHHHHHCCCCCCEEEEEECCCCEEECCCEEEECCCCCCCCCC APDMVLVGGSMPATLSTAADERVLDWLRKVHETTSWTASVCSGSLILGAAGILRGRDATC CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEHHHHHHCCCCCCC HWAGQRLLATFGANPQRDKRIVRDGKVITAAGVSAGLDLGLWLVGEIAGRPRAEATALCI HHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEE EYDPQPPFNTGHMSKASTRNKADAVRVIKGLLSARDAGTELAAGSKMLWTNAIARIRSTD EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHCC RSGHRHAPGPLRAGRG CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA