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The map label for this gene is ypfJ [C]

Identifier: 169629951

GI number: 169629951

Start: 2921579

End: 2922466

Strand: Direct

Name: ypfJ [C]

Synonym: MAB_2867

Alternate gene names: 169629951

Gene position: 2921579-2922466 (Clockwise)

Preceding gene: 169629947

Following gene: 169629953

Centisome position: 57.66

GC content: 63.96

Gene sequence:

>888_bases
ATGACCTTCAACGAAGGCATGCAGATCGACACCAGCACCACCTCGGGCGGCGGCATGGGCCGCGGCCCCAAGATGGCCAT
CGGCGGCGGCGTAGGAGGGTTGCTGATAGCGGTCGTCGTCATGCTGCTCGGCGGTGATCCCAGCCAGGTCCTGCAACAAC
AGGGTCCCCAGCAGGCTGGGCCGGCACGGGAACAGACCCAGGATTTCAGCCACTGCAAGACGGGTGCTGACGCGAACAAG
TCATTGGACTGCCGCATCATCGCCACCGGAAACTCGGTGGACGCCGTCTGGACCCAGATCCTCGGCCCGAAGTACCCGCG
ACCGAATGTCAAGCTGTTCAGCAACCAAGTGAACACCGGGTGCGGGGCGGCCACCACCGAGGTCGGCCCCTTCTATTGCC
CCGCCGACCGCACCGCCTACTTCGACACCAGTTTCTTCCAGGTCCTGGTCGACCAATTCGGCTCCAGCGGAGGCCCGTTG
GCGCAGGAATATGTGGTGGCTCACGAATACGGTCATCACGTGCAAAACCTGTTCGGCGTTCTGGGCAAGAATCATCGCTG
CGCCGAGGGCCAGGCGGGCGGCGGCGTGTGCACCGAGTTGCAGGCCGACTGCTATGCGGGCGTATGGGCCAAGCATGCGT
CCACCACCGTTCAGGAAGGCACCGGCGTCCCCTTCCTGAAACCCTTGACGGAGCAGGATATTCGTGACGCGTTGTCGGCG
GCTTCCTCCGTCGGCGATGACCGCATCCAGAAGCGGGCCACCGGTCGCGTCAATCCCGAAGCCTGGTCGCACGGCTCGTC
CGAGCAACGCCAGCGATGGTTCACACAGGGTTACAACACCGGCGATTTCCGCACCTGCGATACCTTCAACGCCCAGAGCC
TGAACTAG

Upstream 100 bases:

>100_bases
CTCTTCGCCATGTAGCGATACGCGGGTCTGTGGAGTATGCAAAAGTATCGGCAGCCGACGGCACAGTGGCGCGGACACAG
ACTTGGGAGTGGGCAGACCA

Downstream 100 bases:

>100_bases
TTTCAGAACAGCGTCGGCTCCAGCGCCGGCGCCATTTTCACTGGCCGCGTTGGTGTTTCCTCGCGATGCGAGGACAGGCG
GTGCTTCTGGACCAGTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTFNEGMQIDTSTTSGGGMGRGPKMAIGGGVGGLLIAVVVMLLGGDPSQVLQQQGPQQAGPAREQTQDFSHCKTGADANK
SLDCRIIATGNSVDAVWTQILGPKYPRPNVKLFSNQVNTGCGAATTEVGPFYCPADRTAYFDTSFFQVLVDQFGSSGGPL
AQEYVVAHEYGHHVQNLFGVLGKNHRCAEGQAGGGVCTELQADCYAGVWAKHASTTVQEGTGVPFLKPLTEQDIRDALSA
ASSVGDDRIQKRATGRVNPEAWSHGSSEQRQRWFTQGYNTGDFRTCDTFNAQSLN

Sequences:

>Translated_295_residues
MTFNEGMQIDTSTTSGGGMGRGPKMAIGGGVGGLLIAVVVMLLGGDPSQVLQQQGPQQAGPAREQTQDFSHCKTGADANK
SLDCRIIATGNSVDAVWTQILGPKYPRPNVKLFSNQVNTGCGAATTEVGPFYCPADRTAYFDTSFFQVLVDQFGSSGGPL
AQEYVVAHEYGHHVQNLFGVLGKNHRCAEGQAGGGVCTELQADCYAGVWAKHASTTVQEGTGVPFLKPLTEQDIRDALSA
ASSVGDDRIQKRATGRVNPEAWSHGSSEQRQRWFTQGYNTGDFRTCDTFNAQSLN
>Mature_294_residues
TFNEGMQIDTSTTSGGGMGRGPKMAIGGGVGGLLIAVVVMLLGGDPSQVLQQQGPQQAGPAREQTQDFSHCKTGADANKS
LDCRIIATGNSVDAVWTQILGPKYPRPNVKLFSNQVNTGCGAATTEVGPFYCPADRTAYFDTSFFQVLVDQFGSSGGPLA
QEYVVAHEYGHHVQNLFGVLGKNHRCAEGQAGGGVCTELQADCYAGVWAKHASTTVQEGTGVPFLKPLTEQDIRDALSAA
SSVGDDRIQKRATGRVNPEAWSHGSSEQRQRWFTQGYNTGDFRTCDTFNAQSLN

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=276, Percent_Identity=35.5072463768116, Blast_Score=168, Evalue=4e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31388; Mature: 31257

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFNEGMQIDTSTTSGGGMGRGPKMAIGGGVGGLLIAVVVMLLGGDPSQVLQQQGPQQAG
CCCCCCCEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC
PAREQTQDFSHCKTGADANKSLDCRIIATGNSVDAVWTQILGPKYPRPNVKLFSNQVNTG
CCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCEEECCCCCCC
CGAATTEVGPFYCPADRTAYFDTSFFQVLVDQFGSSGGPLAQEYVVAHEYGHHVQNLFGV
CCCCCCCCCCEECCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LGKNHRCAEGQAGGGVCTELQADCYAGVWAKHASTTVQEGTGVPFLKPLTEQDIRDALSA
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHH
ASSVGDDRIQKRATGRVNPEAWSHGSSEQRQRWFTQGYNTGDFRTCDTFNAQSLN
HHHCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TFNEGMQIDTSTTSGGGMGRGPKMAIGGGVGGLLIAVVVMLLGGDPSQVLQQQGPQQAG
CCCCCCEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC
PAREQTQDFSHCKTGADANKSLDCRIIATGNSVDAVWTQILGPKYPRPNVKLFSNQVNTG
CCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCEEECCCCCCC
CGAATTEVGPFYCPADRTAYFDTSFFQVLVDQFGSSGGPLAQEYVVAHEYGHHVQNLFGV
CCCCCCCCCCEECCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LGKNHRCAEGQAGGGVCTELQADCYAGVWAKHASTTVQEGTGVPFLKPLTEQDIRDALSA
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHH
ASSVGDDRIQKRATGRVNPEAWSHGSSEQRQRWFTQGYNTGDFRTCDTFNAQSLN
HHHCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]