| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629942
Identifier: 169629942
GI number: 169629942
Start: 2908088
End: 2910751
Strand: Reverse
Name: 169629942
Synonym: MAB_2858c
Alternate gene names: NA
Gene position: 2910751-2908088 (Counterclockwise)
Preceding gene: 169629943
Following gene: 169629941
Centisome position: 57.44
GC content: 66.4
Gene sequence:
>2664_bases GTGGCAGCACCTGCTTCGGGGGCTCCCGTCGGACCCGGCTTCGCTGTGGGCGACAACCCGTTGATCGCGCAGTACGCGAG CGCGCGCGCTCAGGGCGCGCTGTTCGAGGTCGGGCGCCGGGGCGACCAGGCGGGTTACGACGAGTTCCTGGCTCCAGACG GCAGCGTTCGCCCGGCATGGACGGACCTTGCCGACGCCATCGCGCAGCGCGGCCGTCCCGGCCTGGATCGCCTGCTGGAC CGTGTGCACACGCTTGTCGACAGCGACGGCATCACCTACATGGATCCGCGCCGCGCACCCGGATCCGTGTCCGGCCCCGA CGCGCCCGCTCATCCGGTGCCGTGGCGCCTGGATGGGCTGCCCCTGCTGCTGGATCCCGCCGACTGGAATGTTCTGGAGG TCGGGCTCACCCAGCGGGCCACCCTGCTGGATGCGGTTCTCAGCGACTTATACGGAGCACAGGAGCTGATCAGTTCCGGA GCGCTGCCGCCCCAGCTGCTCTTCGCGCATCCCGGCTATGTGCGGGCTGCTCACGGCATGGCCCTGCCGGGGCGGCACCA GCTGTTTCTGCTCGGCTGCGATATCAGCCGCACCGCCACCGGCGACTTTCGTGTGAACGCGGATTGGACACAGGCACCGT CCGGTGCCGGTTATGCGATGGCGGACCGGCGGGTGGTCGCCCATGCCGCGCCCGATCTGTACGAGAAGGTGGCGCCGCGG CCAACTTCGTCTTTCGCGCAGACACTGCGGTTGGCGCTGATCGATGTCGCGCCGGAGTCCGTGGAGGATCCGACGATCGT GGTGCTGAGCCCCGGCATCCATTCGGAGACCTCTTTCGATCAGGCCTACCTCGCCTCGGTGCTGGGTTTCCCGCTGGTCG AGTCCGCAGATCTGGTGGTACGCGACGGCAAGCTATGGATGCGCTCGCTCGGCACCCTGCGCCGGGTTGATGTGGTGTTG CGCCGCGTGGATGCCGACTACTCCGATCCGCTCGATCTGCGGGCCGACTCCCAGCTCGGCGTCGTCGGGTTGGTCGAGGT ACTCCGCCGGGGCGCGGTGACCGTCGTCAACTCACTGGGCAGCGGAGTGTTGGAGAATCCGGGCCTGGCCCGTTTCCTGC CGGATTTGTCGCGACGACTACTCGACGAGCCACTTGCCTTGTCCGGCGGCCAATCATGGTGGGGTGGCATCGATACGGAG CGCTCGCATCTACTCGCCAACCTGGCCTCGCTGTTGGTGAAATCGACAGCGGAGGAGGAGGTCTACACCGGGCCATTGGA GTCCGCGCAGACGCTGGAAACGCTGCGGGCACGTATCGAAGCGCAACCCTGGCGCTGGGTCGGTCAAGAACTCCCCGAAT TGTCCGTGGCTCCCACCTACCTGCGCTCGGGCGCGCTCACCGCCGCGCCCGTCGGCATGCGGCTGTTCACAGTGGCGCAG CGGGGTGGCTACGCGCCGATGATCGGTGGCCTCGGCTATGTCGCGGCTTCCGGATACTCGGGTTCCACTCTCAACAGCTT TGCCGCTAAAGATCTTTGGGTCCAGCAGCCGGACCGGGATCAGACCGAGCGTGCCCTGACGGTGGCGCCGCTGGACCTGC CCGGTGGCCGATCGGCGGGATCCGACGCGGTCAGTTCGCCGCGCGTGTTGTCGGACTTGTTCTGGCTGGGGCGCTACGGA GAGCGCGCGGAGAATCTGGTCAGGCTGCTATCGGTCACTCGCGAACGCTTCCACGAGTATCGGTACCGGCAATTCATGGA GGCCAGTGAATGTGTTCCGGTGCTGTTGAAGGCATTGGGTGACATCACCGGTACCGACACCGCGGCCGAGGATCTGGGAA CCCAGCTGTGGTCTCTCACGGTGGACAAGGAGCGGTCAGGTTCACTGGCGCAGTCGGTAGAGCGGCTGGGCCTGGCCGCC CGCGCGGTCCGTGACCAAATGTCCAACGACACCTGGATGGTGCTGGGCGGGATGGATCGGGCCATCGCGGCCGCCGCGGC CGAGTATGACGAGTTCAGGCGATCCGGCGATGCCCCGACCCGTGCCGATGACACTGTGCTGGCCGCGACGCAAACCCAGG TACTGGCAGGGCTTCTCGCGTTGTCCGGGCTGGCGGCGGAGTCCACCGTTCACGACATCGGCTGGACCATCATGGACATC GGTAAGCGCATCGAACGTGGCCTCGGCCTGACCGCCCTGTTGCGGTCCACCCTGACCACGGAGCGCGGTCGTGCCGCCGA ACAGTCGGTCACCGAATCCACACTGGTGGCGTGTGAGTCCTCGGTGATGTACCGTCGGCGCACTCGGGGCAAGATCAGTC TGGAGGCGGTTGCCGACCTGTTGTTATTCGATGCCGATAACCCGAGATCTCTTTTGTATCAGGTCGAATCGTTGCGCACC GACCTCAAGTCGTTGCCCAGTGCCTCGGGCACTTCACGCCCCGAACGGTTGGTGGAAGACCTGGTGACGCAGCTGCGACG GATCGACCCCGCGGATTTGGAGACCACCGGAGAGCAAGGGTTGCGGGACACGCTGGCCGAAACCCTCGACAGCGTCCATC ATGCCTTGCGTGAACTGTCTTCGGTGGTCACCGCGACCCACTTGTCGATGCCGACCGGGATGCAACCGTTGTGGGGTCCG GATACCAGGCGGAGGCTGCCATGA
Upstream 100 bases:
>100_bases ATGTCCACCGACGCCGTGGCGCCAGGCATCCTGGATTTACGTCGGGCGAGAACCGTGGGACGCAGGTAGAACCGCATAAA CGGGAAGGAAGGTACGGCCG
Downstream 100 bases:
>100_bases CCAATGGCCTCTCCTCGATCCGCTATCAGGTCACGCACCGCACGCTGTACCGGTACTCCGACGATGTCACCAGTTCCTAC GGGCGCGGCTATCTCACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 887; Mature: 886
Protein sequence:
>887_residues MAAPASGAPVGPGFAVGDNPLIAQYASARAQGALFEVGRRGDQAGYDEFLAPDGSVRPAWTDLADAIAQRGRPGLDRLLD RVHTLVDSDGITYMDPRRAPGSVSGPDAPAHPVPWRLDGLPLLLDPADWNVLEVGLTQRATLLDAVLSDLYGAQELISSG ALPPQLLFAHPGYVRAAHGMALPGRHQLFLLGCDISRTATGDFRVNADWTQAPSGAGYAMADRRVVAHAAPDLYEKVAPR PTSSFAQTLRLALIDVAPESVEDPTIVVLSPGIHSETSFDQAYLASVLGFPLVESADLVVRDGKLWMRSLGTLRRVDVVL RRVDADYSDPLDLRADSQLGVVGLVEVLRRGAVTVVNSLGSGVLENPGLARFLPDLSRRLLDEPLALSGGQSWWGGIDTE RSHLLANLASLLVKSTAEEEVYTGPLESAQTLETLRARIEAQPWRWVGQELPELSVAPTYLRSGALTAAPVGMRLFTVAQ RGGYAPMIGGLGYVAASGYSGSTLNSFAAKDLWVQQPDRDQTERALTVAPLDLPGGRSAGSDAVSSPRVLSDLFWLGRYG ERAENLVRLLSVTRERFHEYRYRQFMEASECVPVLLKALGDITGTDTAAEDLGTQLWSLTVDKERSGSLAQSVERLGLAA RAVRDQMSNDTWMVLGGMDRAIAAAAAEYDEFRRSGDAPTRADDTVLAATQTQVLAGLLALSGLAAESTVHDIGWTIMDI GKRIERGLGLTALLRSTLTTERGRAAEQSVTESTLVACESSVMYRRRTRGKISLEAVADLLLFDADNPRSLLYQVESLRT DLKSLPSASGTSRPERLVEDLVTQLRRIDPADLETTGEQGLRDTLAETLDSVHHALRELSSVVTATHLSMPTGMQPLWGP DTRRRLP
Sequences:
>Translated_887_residues MAAPASGAPVGPGFAVGDNPLIAQYASARAQGALFEVGRRGDQAGYDEFLAPDGSVRPAWTDLADAIAQRGRPGLDRLLD RVHTLVDSDGITYMDPRRAPGSVSGPDAPAHPVPWRLDGLPLLLDPADWNVLEVGLTQRATLLDAVLSDLYGAQELISSG ALPPQLLFAHPGYVRAAHGMALPGRHQLFLLGCDISRTATGDFRVNADWTQAPSGAGYAMADRRVVAHAAPDLYEKVAPR PTSSFAQTLRLALIDVAPESVEDPTIVVLSPGIHSETSFDQAYLASVLGFPLVESADLVVRDGKLWMRSLGTLRRVDVVL RRVDADYSDPLDLRADSQLGVVGLVEVLRRGAVTVVNSLGSGVLENPGLARFLPDLSRRLLDEPLALSGGQSWWGGIDTE RSHLLANLASLLVKSTAEEEVYTGPLESAQTLETLRARIEAQPWRWVGQELPELSVAPTYLRSGALTAAPVGMRLFTVAQ RGGYAPMIGGLGYVAASGYSGSTLNSFAAKDLWVQQPDRDQTERALTVAPLDLPGGRSAGSDAVSSPRVLSDLFWLGRYG ERAENLVRLLSVTRERFHEYRYRQFMEASECVPVLLKALGDITGTDTAAEDLGTQLWSLTVDKERSGSLAQSVERLGLAA RAVRDQMSNDTWMVLGGMDRAIAAAAAEYDEFRRSGDAPTRADDTVLAATQTQVLAGLLALSGLAAESTVHDIGWTIMDI GKRIERGLGLTALLRSTLTTERGRAAEQSVTESTLVACESSVMYRRRTRGKISLEAVADLLLFDADNPRSLLYQVESLRT DLKSLPSASGTSRPERLVEDLVTQLRRIDPADLETTGEQGLRDTLAETLDSVHHALRELSSVVTATHLSMPTGMQPLWGP DTRRRLP >Mature_886_residues AAPASGAPVGPGFAVGDNPLIAQYASARAQGALFEVGRRGDQAGYDEFLAPDGSVRPAWTDLADAIAQRGRPGLDRLLDR VHTLVDSDGITYMDPRRAPGSVSGPDAPAHPVPWRLDGLPLLLDPADWNVLEVGLTQRATLLDAVLSDLYGAQELISSGA LPPQLLFAHPGYVRAAHGMALPGRHQLFLLGCDISRTATGDFRVNADWTQAPSGAGYAMADRRVVAHAAPDLYEKVAPRP TSSFAQTLRLALIDVAPESVEDPTIVVLSPGIHSETSFDQAYLASVLGFPLVESADLVVRDGKLWMRSLGTLRRVDVVLR RVDADYSDPLDLRADSQLGVVGLVEVLRRGAVTVVNSLGSGVLENPGLARFLPDLSRRLLDEPLALSGGQSWWGGIDTER SHLLANLASLLVKSTAEEEVYTGPLESAQTLETLRARIEAQPWRWVGQELPELSVAPTYLRSGALTAAPVGMRLFTVAQR GGYAPMIGGLGYVAASGYSGSTLNSFAAKDLWVQQPDRDQTERALTVAPLDLPGGRSAGSDAVSSPRVLSDLFWLGRYGE RAENLVRLLSVTRERFHEYRYRQFMEASECVPVLLKALGDITGTDTAAEDLGTQLWSLTVDKERSGSLAQSVERLGLAAR AVRDQMSNDTWMVLGGMDRAIAAAAAEYDEFRRSGDAPTRADDTVLAATQTQVLAGLLALSGLAAESTVHDIGWTIMDIG KRIERGLGLTALLRSTLTTERGRAAEQSVTESTLVACESSVMYRRRTRGKISLEAVADLLLFDADNPRSLLYQVESLRTD LKSLPSASGTSRPERLVEDLVTQLRRIDPADLETTGEQGLRDTLAETLDSVHHALRELSSVVTATHLSMPTGMQPLWGPD TRRRLP
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007296 - InterPro: IPR007297 - InterPro: IPR007302 [H]
Pfam domain/function: PF04168 DUF403; PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 95597; Mature: 95466
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPASGAPVGPGFAVGDNPLIAQYASARAQGALFEVGRRGDQAGYDEFLAPDGSVRPAW CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHH TDLADAIAQRGRPGLDRLLDRVHTLVDSDGITYMDPRRAPGSVSGPDAPAHPVPWRLDGL HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCC PLLLDPADWNVLEVGLTQRATLLDAVLSDLYGAQELISSGALPPQLLFAHPGYVRAAHGM CEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHCCC ALPGRHQLFLLGCDISRTATGDFRVNADWTQAPSGAGYAMADRRVVAHAAPDLYEKVAPR CCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCHHHHCCHHHHHHHCCC PTSSFAQTLRLALIDVAPESVEDPTIVVLSPGIHSETSFDQAYLASVLGFPLVESADLVV CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEE RDGKLWMRSLGTLRRVDVVLRRVDADYSDPLDLRADSQLGVVGLVEVLRRGAVTVVNSLG ECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHC SGVLENPGLARFLPDLSRRLLDEPLALSGGQSWWGGIDTERSHLLANLASLLVKSTAEEE CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH VYTGPLESAQTLETLRARIEAQPWRWVGQELPELSVAPTYLRSGALTAAPVGMRLFTVAQ HHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHH RGGYAPMIGGLGYVAASGYSGSTLNSFAAKDLWVQQPDRDQTERALTVAPLDLPGGRSAG CCCCCCHHCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHCEEEEEECCCCCCCCCC SDAVSSPRVLSDLFWLGRYGERAENLVRLLSVTRERFHEYRYRQFMEASECVPVLLKALG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DITGTDTAAEDLGTQLWSLTVDKERSGSLAQSVERLGLAARAVRDQMSNDTWMVLGGMDR CCCCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHH AIAAAAAEYDEFRRSGDAPTRADDTVLAATQTQVLAGLLALSGLAAESTVHDIGWTIMDI HHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKRIERGLGLTALLRSTLTTERGRAAEQSVTESTLVACESSVMYRRRTRGKISLEAVADL HHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHH LLFDADNPRSLLYQVESLRTDLKSLPSASGTSRPERLVEDLVTQLRRIDPADLETTGEQG HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH LRDTLAETLDSVHHALRELSSVVTATHLSMPTGMQPLWGPDTRRRLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AAPASGAPVGPGFAVGDNPLIAQYASARAQGALFEVGRRGDQAGYDEFLAPDGSVRPAW CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHH TDLADAIAQRGRPGLDRLLDRVHTLVDSDGITYMDPRRAPGSVSGPDAPAHPVPWRLDGL HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCC PLLLDPADWNVLEVGLTQRATLLDAVLSDLYGAQELISSGALPPQLLFAHPGYVRAAHGM CEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHCCC ALPGRHQLFLLGCDISRTATGDFRVNADWTQAPSGAGYAMADRRVVAHAAPDLYEKVAPR CCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCHHHHCCHHHHHHHCCC PTSSFAQTLRLALIDVAPESVEDPTIVVLSPGIHSETSFDQAYLASVLGFPLVESADLVV CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEE RDGKLWMRSLGTLRRVDVVLRRVDADYSDPLDLRADSQLGVVGLVEVLRRGAVTVVNSLG ECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHC SGVLENPGLARFLPDLSRRLLDEPLALSGGQSWWGGIDTERSHLLANLASLLVKSTAEEE CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH VYTGPLESAQTLETLRARIEAQPWRWVGQELPELSVAPTYLRSGALTAAPVGMRLFTVAQ HHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHH RGGYAPMIGGLGYVAASGYSGSTLNSFAAKDLWVQQPDRDQTERALTVAPLDLPGGRSAG CCCCCCHHCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHCEEEEEECCCCCCCCCC SDAVSSPRVLSDLFWLGRYGERAENLVRLLSVTRERFHEYRYRQFMEASECVPVLLKALG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DITGTDTAAEDLGTQLWSLTVDKERSGSLAQSVERLGLAARAVRDQMSNDTWMVLGGMDR CCCCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHH AIAAAAAEYDEFRRSGDAPTRADDTVLAATQTQVLAGLLALSGLAAESTVHDIGWTIMDI HHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKRIERGLGLTALLRSTLTTERGRAAEQSVTESTLVACESSVMYRRRTRGKISLEAVADL HHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHH LLFDADNPRSLLYQVESLRTDLKSLPSASGTSRPERLVEDLVTQLRRIDPADLETTGEQG HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH LRDTLAETLDSVHHALRELSSVVTATHLSMPTGMQPLWGPDTRRRLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]