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The map label for this gene is pyrF [H]

Identifier: 169629910

GI number: 169629910

Start: 2875820

End: 2876641

Strand: Reverse

Name: pyrF [H]

Synonym: MAB_2826c

Alternate gene names: 169629910

Gene position: 2876641-2875820 (Counterclockwise)

Preceding gene: 169629911

Following gene: 169629908

Centisome position: 56.77

GC content: 69.1

Gene sequence:

>822_bases
GTGGATCCGGTGACGTTCGGGGCACGGCTGCGGGCCGCGACCACATCACGCGGCCCGCTATGTGTGGGCATCGATCCGCA
CCCGGAGCTGCTGCGTGCCTGGGGTTTCGACGCCGACGCAGCGGGTCTGGCCAGGTTCAGCGATATCTGCGTCGAGGCAT
TCGCCGACGTCGCGATCGTCAAGCCGCAGGTGGCGTTCTTTGAGTCTCACGGTGCGGCAGGTTATTCGGTCCTGGAACGC
GCTATCGCGGGATTGCGTGACGCGGGTGTGTTGGTGCTCGCCGATGCCAAGCGCGGGGACATCGGCTCGACGATGGCGGC
CTATGCACAAGCCTGGCTGGGCGATTCACCGCTGAGCTCAGATGCGGTCACCGCCTCCCCGTACCTGGGGTTCGGGTCGT
TGTCCCCCTTGCTGGACCTCGCGCGCGAACGTGATCGTGGCGTCTTTGTGCTGGCCGCGACCTCCAATCCGGAGGCCCCT
CCGGTGCAGCGGGCGCGCGCCGGAGAAAAGACCGTCGCGCAAGCGATGGTGGACCAGGTGGCCGCGCTGAACGCGGAACA
GGCTGGCCCGGGTTCGGTGGGCGTGGTGGTCGGCGTGACCGTCACGGATCCACCGGATCTATCGTCGCTGGGCGGCCCGG
TGCTGGTGCCGGGGCTCGGCGCCCAGGGCGGCAAGCCCGAGGACCTACGTGGGCTGGGTGGTGCCCCGGGATCGCTGCTG
CCCGCGGTCTCCCGTGAGGTGTTGCGGGCCGGGCCGGACGCTACCGCGCTGCGTGCGCAGGTAAGTCGATTGCGCGACAG
CGTCGCCTATCTACTCGACTGA

Upstream 100 bases:

>100_bases
GATATCGGGGTGCGGTCGTTGCAGGAACTCCACGCAGGGTTGCGATGAGCCGCTTGCGCGAAGAGCGTCGGGTTGCGATG
AGTCGCTTGTGTGAAGAGCG

Downstream 100 bases:

>100_bases
GTCTGGCGCCGGTCGAGAGTGCGAATCCGGTCGATAACCGACCGAAAATCGACACAATCCGCACACTCGGGTCCGCGGGT
GTCTATCTGGCCGAGTGCGC

Product: orotidine 5'-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MDPVTFGARLRAATTSRGPLCVGIDPHPELLRAWGFDADAAGLARFSDICVEAFADVAIVKPQVAFFESHGAAGYSVLER
AIAGLRDAGVLVLADAKRGDIGSTMAAYAQAWLGDSPLSSDAVTASPYLGFGSLSPLLDLARERDRGVFVLAATSNPEAP
PVQRARAGEKTVAQAMVDQVAALNAEQAGPGSVGVVVGVTVTDPPDLSSLGGPVLVPGLGAQGGKPEDLRGLGGAPGSLL
PAVSREVLRAGPDATALRAQVSRLRDSVAYLLD

Sequences:

>Translated_273_residues
MDPVTFGARLRAATTSRGPLCVGIDPHPELLRAWGFDADAAGLARFSDICVEAFADVAIVKPQVAFFESHGAAGYSVLER
AIAGLRDAGVLVLADAKRGDIGSTMAAYAQAWLGDSPLSSDAVTASPYLGFGSLSPLLDLARERDRGVFVLAATSNPEAP
PVQRARAGEKTVAQAMVDQVAALNAEQAGPGSVGVVVGVTVTDPPDLSSLGGPVLVPGLGAQGGKPEDLRGLGGAPGSLL
PAVSREVLRAGPDATALRAQVSRLRDSVAYLLD
>Mature_273_residues
MDPVTFGARLRAATTSRGPLCVGIDPHPELLRAWGFDADAAGLARFSDICVEAFADVAIVKPQVAFFESHGAAGYSVLER
AIAGLRDAGVLVLADAKRGDIGSTMAAYAQAWLGDSPLSSDAVTASPYLGFGSLSPLLDLARERDRGVFVLAATSNPEAP
PVQRARAGEKTVAQAMVDQVAALNAEQAGPGSVGVVVGVTVTDPPDLSSLGGPVLVPGLGAQGGKPEDLRGLGGAPGSLL
PAVSREVLRAGPDATALRAQVSRLRDSVAYLLD

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR018089
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 27846; Mature: 27846

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS00156 OMPDECASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPVTFGARLRAATTSRGPLCVGIDPHPELLRAWGFDADAAGLARFSDICVEAFADVAIV
CCCCCCCCEEEEECCCCCCEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
KPQVAFFESHGAAGYSVLERAIAGLRDAGVLVLADAKRGDIGSTMAAYAQAWLGDSPLSS
CCHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC
DAVTASPYLGFGSLSPLLDLARERDRGVFVLAATSNPEAPPVQRARAGEKTVAQAMVDQV
CCEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHH
AALNAEQAGPGSVGVVVGVTVTDPPDLSSLGGPVLVPGLGAQGGKPEDLRGLGGAPGSLL
HHCCCCCCCCCCEEEEEEEEECCCCCHHHCCCCEEECCCCCCCCCCHHHHCCCCCCCHHH
PAVSREVLRAGPDATALRAQVSRLRDSVAYLLD
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDPVTFGARLRAATTSRGPLCVGIDPHPELLRAWGFDADAAGLARFSDICVEAFADVAIV
CCCCCCCCEEEEECCCCCCEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
KPQVAFFESHGAAGYSVLERAIAGLRDAGVLVLADAKRGDIGSTMAAYAQAWLGDSPLSS
CCHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC
DAVTASPYLGFGSLSPLLDLARERDRGVFVLAATSNPEAPPVQRARAGEKTVAQAMVDQV
CCEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHH
AALNAEQAGPGSVGVVVGVTVTDPPDLSSLGGPVLVPGLGAQGGKPEDLRGLGGAPGSLL
HHCCCCCCCCCCEEEEEEEEECCCCCHHHCCCCEEECCCCCCCCCCHHHHCCCCCCCHHH
PAVSREVLRAGPDATALRAQVSRLRDSVAYLLD
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA