| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629860
Identifier: 169629860
GI number: 169629860
Start: 2822433
End: 2824082
Strand: Direct
Name: 169629860
Synonym: MAB_2776
Alternate gene names: NA
Gene position: 2822433-2824082 (Clockwise)
Preceding gene: 169629854
Following gene: 169629869
Centisome position: 55.7
GC content: 66.91
Gene sequence:
>1650_bases GTGGGAGAGATGAGTCGTGGGGTGGCTTTACGGTTGGCGTTGTATCTGCCGGTGTGTATGGGAGGACTTCTGCTGGCGGC ACCGGCAAGCAGCGATGTTTCCCCGGGCACCGTCGCTGTTGCCATGACCCTCGCCGACGACGGCGTGCTGAACATCACCG AGACCATCACGCCCGCCAAAGGTCAAGTGCTGCAACGCCATCTACTGCTCGATGTGCCCGTTGAAGGTAATCGGATACAA CATTTCCAGGTCAGCAACGTCACTAGCACCGGCGACGCGGAGGCCGCTGGCGACACCGGCACATTGACCATCGTGGCTCG CGGTCCAGCGACCGTCAGCTATGCCGTCCGGGGTGCCGTCGCCGATGCCGCCGATCACCAGCAGGTGACCTGGCCGTTTG CCTCCGGCTGGGATTCGGGAATGAGGGATGTCACGGCCTCATTCGCCTCTCCCAGCACCAAACCCAGCTCCCCCACGTGC TCCCTGGGCCCACCGGGTTCTCGCACACGTTGTACTGCGGCGCAGGTCGATCACACCGGGGTGGTGCGAGTCCAGCAAGA CAATGTGCCGCCGGACTCGATCGCAACCTTCACCGTGACGGTTCCGGCCCGCACCGTTCCCGCCGGCGCCATTTTCACCG TGATCCCCGGCCCGGCAGGCCCCTTCGCGCTGACGCGACCGGCGATCGCAGCCCTGGCCGGCCTGGGGGCCGTCACCGCC GCATTGGCCGGTTGGGTAGTCGTGGCCCGCCGCCGGGACACCCACGCCGCCGAAACCAGCGTCACCCCAATCGATCCCCT GGTTCGCGACCACACAGGATCACATTTCGCTGCGCCGGACGGGGTGCTCCCCGGGCAGATAGGCACCGTCATCGATCTGC GGGTGGATGCCGTAGACCTGACCGCGACGGTCATTGATCTCGCGGTCCGCGGATATCTGTGGATCGCCGAAACAACGGGT GCCGAAGGCCGGCTCGATTGGCAGATATCCCGGCGCGCCCCGGCGGACAGCCTCTTGGCCCCCTATGAGGCGCAACTTCT GGACATCTTGTTGCCTGCGAAGACCGAGACGGTGTACATGTCCAGCCTCCAGATGCCGGGTTCCCGGGTGGATATCGGCC GCATTCCCGAGATGATGTATGCCGACGCCCGGCTTCGCGGATGGTTCCGCCGTACGCCGGAGCACCTGGGCGCCCTGACC GGTTACGGGGTCGGCGTGCTGCTGGCGGGTCTCGTAGTCACCGCCGTCCTAGCCGTCAGCATCGGCAACGCGATGATCGG GGTCGCGGTGTGCGGCGTGGGCGCGGTCTGCGCGCTGGCCGGCACGCTGCTGCCGATCCGCACCGCGCGCGGGCATCTGC TGGTGGCGCACGTGGCCGCGCTGCGCCACTATCTGAGCGAGTTCAACGTCGATGACTTGGCGCCCGCTGATCGCGAGCTG GTGCTGACCCGGGCAGCACCGTATGCCGTTGTGCTCGGGCAGCTCGGCCCGTGGCTCACGGCCATGGGAAGGCTGGATAC CGCCGCCGACGGTACACCCGGAATCGATTGGTACGACACGGCTTCCAGCGATACCGCGAACCTGCCCGCCTTCCTCACCG CCCTCGACGGAGTGTTGGCGCGCGGCGCGCATCTACGCAATCTGCCGTAG
Upstream 100 bases:
>100_bases ACCGGTCTGGGCTGGAAATACGGTCGCGGCTCCATGCAGTCCCCCCACCACATTCTGTGAATGCGCGCCAGCATATCGAC CCTGACCTAGGGTTACCGCC
Downstream 100 bases:
>100_bases ATCCCGGCTAAAGCAGCGGACCGCCCGCGGCGATCGCCGACATCTGGGCGAACTGCTCGCCGTCCAGCGAGGCGCCACCG ACCAACGCTCCGTCGACATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 549; Mature: 548
Protein sequence:
>549_residues MGEMSRGVALRLALYLPVCMGGLLLAAPASSDVSPGTVAVAMTLADDGVLNITETITPAKGQVLQRHLLLDVPVEGNRIQ HFQVSNVTSTGDAEAAGDTGTLTIVARGPATVSYAVRGAVADAADHQQVTWPFASGWDSGMRDVTASFASPSTKPSSPTC SLGPPGSRTRCTAAQVDHTGVVRVQQDNVPPDSIATFTVTVPARTVPAGAIFTVIPGPAGPFALTRPAIAALAGLGAVTA ALAGWVVVARRRDTHAAETSVTPIDPLVRDHTGSHFAAPDGVLPGQIGTVIDLRVDAVDLTATVIDLAVRGYLWIAETTG AEGRLDWQISRRAPADSLLAPYEAQLLDILLPAKTETVYMSSLQMPGSRVDIGRIPEMMYADARLRGWFRRTPEHLGALT GYGVGVLLAGLVVTAVLAVSIGNAMIGVAVCGVGAVCALAGTLLPIRTARGHLLVAHVAALRHYLSEFNVDDLAPADREL VLTRAAPYAVVLGQLGPWLTAMGRLDTAADGTPGIDWYDTASSDTANLPAFLTALDGVLARGAHLRNLP
Sequences:
>Translated_549_residues MGEMSRGVALRLALYLPVCMGGLLLAAPASSDVSPGTVAVAMTLADDGVLNITETITPAKGQVLQRHLLLDVPVEGNRIQ HFQVSNVTSTGDAEAAGDTGTLTIVARGPATVSYAVRGAVADAADHQQVTWPFASGWDSGMRDVTASFASPSTKPSSPTC SLGPPGSRTRCTAAQVDHTGVVRVQQDNVPPDSIATFTVTVPARTVPAGAIFTVIPGPAGPFALTRPAIAALAGLGAVTA ALAGWVVVARRRDTHAAETSVTPIDPLVRDHTGSHFAAPDGVLPGQIGTVIDLRVDAVDLTATVIDLAVRGYLWIAETTG AEGRLDWQISRRAPADSLLAPYEAQLLDILLPAKTETVYMSSLQMPGSRVDIGRIPEMMYADARLRGWFRRTPEHLGALT GYGVGVLLAGLVVTAVLAVSIGNAMIGVAVCGVGAVCALAGTLLPIRTARGHLLVAHVAALRHYLSEFNVDDLAPADREL VLTRAAPYAVVLGQLGPWLTAMGRLDTAADGTPGIDWYDTASSDTANLPAFLTALDGVLARGAHLRNLP >Mature_548_residues GEMSRGVALRLALYLPVCMGGLLLAAPASSDVSPGTVAVAMTLADDGVLNITETITPAKGQVLQRHLLLDVPVEGNRIQH FQVSNVTSTGDAEAAGDTGTLTIVARGPATVSYAVRGAVADAADHQQVTWPFASGWDSGMRDVTASFASPSTKPSSPTCS LGPPGSRTRCTAAQVDHTGVVRVQQDNVPPDSIATFTVTVPARTVPAGAIFTVIPGPAGPFALTRPAIAALAGLGAVTAA LAGWVVVARRRDTHAAETSVTPIDPLVRDHTGSHFAAPDGVLPGQIGTVIDLRVDAVDLTATVIDLAVRGYLWIAETTGA EGRLDWQISRRAPADSLLAPYEAQLLDILLPAKTETVYMSSLQMPGSRVDIGRIPEMMYADARLRGWFRRTPEHLGALTG YGVGVLLAGLVVTAVLAVSIGNAMIGVAVCGVGAVCALAGTLLPIRTARGHLLVAHVAALRHYLSEFNVDDLAPADRELV LTRAAPYAVVLGQLGPWLTAMGRLDTAADGTPGIDWYDTASSDTANLPAFLTALDGVLARGAHLRNLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56977; Mature: 56846
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEMSRGVALRLALYLPVCMGGLLLAAPASSDVSPGTVAVAMTLADDGVLNITETITPAK CCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCH GQVLQRHLLLDVPVEGNRIQHFQVSNVTSTGDAEAAGDTGTLTIVARGPATVSYAVRGAV HHHHHHHHEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHH ADAADHQQVTWPFASGWDSGMRDVTASFASPSTKPSSPTCSLGPPGSRTRCTAAQVDHTG HCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCE VVRVQQDNVPPDSIATFTVTVPARTVPAGAIFTVIPGPAGPFALTRPAIAALAGLGAVTA EEEEECCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH ALAGWVVVARRRDTHAAETSVTPIDPLVRDHTGSHFAAPDGVLPGQIGTVIDLRVDAVDL HHHHHHEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECHHHH TATVIDLAVRGYLWIAETTGAEGRLDWQISRRAPADSLLAPYEAQLLDILLPAKTETVYM HHHHHHHHHHCEEEEEECCCCCCEEEEEEECCCCHHHHCCCHHHHHHHHHCCCCCCEEEE SSLQMPGSRVDIGRIPEMMYADARLRGWFRRTPEHLGALTGYGVGVLLAGLVVTAVLAVS EHHCCCCCEECHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH IGNAMIGVAVCGVGAVCALAGTLLPIRTARGHLLVAHVAALRHYLSEFNVDDLAPADREL HCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEE VLTRAAPYAVVLGQLGPWLTAMGRLDTAADGTPGIDWYDTASSDTANLPAFLTALDGVLA EEEECCCHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH RGAHLRNLP CCCCCCCCC >Mature Secondary Structure GEMSRGVALRLALYLPVCMGGLLLAAPASSDVSPGTVAVAMTLADDGVLNITETITPAK CCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCH GQVLQRHLLLDVPVEGNRIQHFQVSNVTSTGDAEAAGDTGTLTIVARGPATVSYAVRGAV HHHHHHHHEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHH ADAADHQQVTWPFASGWDSGMRDVTASFASPSTKPSSPTCSLGPPGSRTRCTAAQVDHTG HCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCE VVRVQQDNVPPDSIATFTVTVPARTVPAGAIFTVIPGPAGPFALTRPAIAALAGLGAVTA EEEEECCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH ALAGWVVVARRRDTHAAETSVTPIDPLVRDHTGSHFAAPDGVLPGQIGTVIDLRVDAVDL HHHHHHEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECHHHH TATVIDLAVRGYLWIAETTGAEGRLDWQISRRAPADSLLAPYEAQLLDILLPAKTETVYM HHHHHHHHHHCEEEEEECCCCCCEEEEEEECCCCHHHHCCCHHHHHHHHHCCCCCCEEEE SSLQMPGSRVDIGRIPEMMYADARLRGWFRRTPEHLGALTGYGVGVLLAGLVVTAVLAVS EHHCCCCCEECHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH IGNAMIGVAVCGVGAVCALAGTLLPIRTARGHLLVAHVAALRHYLSEFNVDDLAPADREL HCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEE VLTRAAPYAVVLGQLGPWLTAMGRLDTAADGTPGIDWYDTASSDTANLPAFLTALDGVLA EEEECCCHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH RGAHLRNLP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA