| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629809
Identifier: 169629809
GI number: 169629809
Start: 2773381
End: 2774352
Strand: Reverse
Name: 169629809
Synonym: MAB_2725c
Alternate gene names: NA
Gene position: 2774352-2773381 (Counterclockwise)
Preceding gene: 169629810
Following gene: 169629808
Centisome position: 54.75
GC content: 66.36
Gene sequence:
>972_bases GTGAGCACGCCAAGTCCGGCCTCCGGCCGGCCGGTAGACATCCCGTCGCTGCGTCGTGGCGAGATCCGTGATCCGCAGCT GTCGGCGGCACTGCGGACTCTGGAACTGAAGATCCGTCGCAAGCTTGACGGGGTGTTGCACGGCAACCACCTCGGTCTGA TCCCCGGTCCGGGATCAGAGCCGGGGGAGTCGCGGCTGTATCAACCCGGTGACGACGTGCGGCGGATGGACTGGTCGGTG ACGGCCCGGACCACCAGCCCGCATGTCCGCCAGATGATCGCCGACCGCGAGCTGGAGACGTGGCTGGTGGTCGACATGTC GGCGAGTCTGGACTTCGGCACCACCAACTGTGAGAAGCGCGATCTCGCGGTGGCTGCCGCCGCGGCGATCATCTTCCTCA ACAGCGGCGGAGGTAATCGGCTGGGCGCGATCATCGCGAACGGAGACAAGATCGTGCGGTTGCCCGCACGCTCCGGTCGC GCCCACGAACAGGACATCCTGCGTAGCATCGCGACCATGCCCAAGGCCCCTCAAGGGGTGCGTGGTGATCTGTCGGTTGC CATTGACGCGTTGCGCCGCCCGGAGCGCCGGCGCGGGATGGCCGTGATCATCAGCGATTTCCTGGGCCCGATCAACTGGA TGCGGCCGCTACGTGCGATCGGAGGCCGGCACGAGGTGCTGGGCATCGAGGTGCTGGACCCGCGTGATGTGGAGCTACCG GACGTAGGCGAGGTGCTGCTTCAGGACGCCGAGACCGGCATCACCAAGGAGTACCGGATCGACGAGAACTTGCGCCGGGA TTTCCAGCAGGCGGCGGCAAGGCATCATGAAGAGGTGGCACGCACATTACGTCGTTGCGGTGCACCGCTTTTGAGCCTGC GGACCGACCGTGACTGGATCAGCGACATCGTGAGATTCGTCTCGCAACAACGCCGCGGCGCGGTGGCCGGAACGGGGGCG GGGACTCGATGA
Upstream 100 bases:
>100_bases TGCCGCAGGTGAATGCTGTTCCGCAGCAAGGAAATTCGGTGCCGCCGGCGATGGTTGGGACCAACAACCCGGTCCCGGCC GCCCATAACGCCGCACCCAG
Downstream 100 bases:
>100_bases ACGACGTTCCGTTCTTCGGGCCGATGACCCTGACGGGCTTCGCCCATCCGTGGTTCTTCCTGGTGCTGCTGTTGGTGGCA GCCCTGATCGCCCTGTATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSTPSPASGRPVDIPSLRRGEIRDPQLSAALRTLELKIRRKLDGVLHGNHLGLIPGPGSEPGESRLYQPGDDVRRMDWSV TARTTSPHVRQMIADRELETWLVVDMSASLDFGTTNCEKRDLAVAAAAAIIFLNSGGGNRLGAIIANGDKIVRLPARSGR AHEQDILRSIATMPKAPQGVRGDLSVAIDALRRPERRRGMAVIISDFLGPINWMRPLRAIGGRHEVLGIEVLDPRDVELP DVGEVLLQDAETGITKEYRIDENLRRDFQQAAARHHEEVARTLRRCGAPLLSLRTDRDWISDIVRFVSQQRRGAVAGTGA GTR
Sequences:
>Translated_323_residues MSTPSPASGRPVDIPSLRRGEIRDPQLSAALRTLELKIRRKLDGVLHGNHLGLIPGPGSEPGESRLYQPGDDVRRMDWSV TARTTSPHVRQMIADRELETWLVVDMSASLDFGTTNCEKRDLAVAAAAAIIFLNSGGGNRLGAIIANGDKIVRLPARSGR AHEQDILRSIATMPKAPQGVRGDLSVAIDALRRPERRRGMAVIISDFLGPINWMRPLRAIGGRHEVLGIEVLDPRDVELP DVGEVLLQDAETGITKEYRIDENLRRDFQQAAARHHEEVARTLRRCGAPLLSLRTDRDWISDIVRFVSQQRRGAVAGTGA GTR >Mature_322_residues STPSPASGRPVDIPSLRRGEIRDPQLSAALRTLELKIRRKLDGVLHGNHLGLIPGPGSEPGESRLYQPGDDVRRMDWSVT ARTTSPHVRQMIADRELETWLVVDMSASLDFGTTNCEKRDLAVAAAAAIIFLNSGGGNRLGAIIANGDKIVRLPARSGRA HEQDILRSIATMPKAPQGVRGDLSVAIDALRRPERRRGMAVIISDFLGPINWMRPLRAIGGRHEVLGIEVLDPRDVELPD VGEVLLQDAETGITKEYRIDENLRRDFQQAAARHHEEVARTLRRCGAPLLSLRTDRDWISDIVRFVSQQRRGAVAGTGAG TR
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.avium MAV169 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002881 - InterPro: IPR002035 [H]
Pfam domain/function: PF01882 DUF58 [H]
EC number: NA
Molecular weight: Translated: 35529; Mature: 35398
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPSPASGRPVDIPSLRRGEIRDPQLSAALRTLELKIRRKLDGVLHGNHLGLIPGPGSE CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCEEEECCCCCCC PGESRLYQPGDDVRRMDWSVTARTTSPHVRQMIADRELETWLVVDMSASLDFGTTNCEKR CCCCCCCCCCCHHHHCCCEEEEECCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHH DLAVAAAAAIIFLNSGGGNRLGAIIANGDKIVRLPARSGRAHEQDILRSIATMPKAPQGV HHHHHEEEEEEEEECCCCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC RGDLSVAIDALRRPERRRGMAVIISDFLGPINWMRPLRAIGGRHEVLGIEVLDPRDVELP CCHHHHHHHHHHCCHHHCCCEEEHHHHHCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC DVGEVLLQDAETGITKEYRIDENLRRDFQQAAARHHEEVARTLRRCGAPLLSLRTDRDWI CHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHH SDIVRFVSQQRRGAVAGTGAGTR HHHHHHHHHHHCCCEECCCCCCC >Mature Secondary Structure STPSPASGRPVDIPSLRRGEIRDPQLSAALRTLELKIRRKLDGVLHGNHLGLIPGPGSE CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCEEEECCCCCCC PGESRLYQPGDDVRRMDWSVTARTTSPHVRQMIADRELETWLVVDMSASLDFGTTNCEKR CCCCCCCCCCCHHHHCCCEEEEECCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHH DLAVAAAAAIIFLNSGGGNRLGAIIANGDKIVRLPARSGRAHEQDILRSIATMPKAPQGV HHHHHEEEEEEEEECCCCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC RGDLSVAIDALRRPERRRGMAVIISDFLGPINWMRPLRAIGGRHEVLGIEVLDPRDVELP CCHHHHHHHHHHCCHHHCCCEEEHHHHHCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC DVGEVLLQDAETGITKEYRIDENLRRDFQQAAARHHEEVARTLRRCGAPLLSLRTDRDWI CHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHH SDIVRFVSQQRRGAVAGTGAGTR HHHHHHHHHHHCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]