| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is hemH
Identifier: 169629805
GI number: 169629805
Start: 2769628
End: 2770650
Strand: Reverse
Name: hemH
Synonym: MAB_2721c
Alternate gene names: 169629805
Gene position: 2770650-2769628 (Counterclockwise)
Preceding gene: 169629806
Following gene: 169629803
Centisome position: 54.68
GC content: 64.52
Gene sequence:
>1023_bases GTGTTATTTGACGCGGTGCTGCTGCTGTCCTTCGGGGGTCCCGAGGGGCCGCAGGAGGTTCGGCCGTTCCTGGAGAATGT GACGCGTGGCCGCGGCATTCCACCCGAGCGTCTCGACGAGGTAGCCGAGCACTACTTCCATTTCGGTGGCGTGTCTCCGA TCAACGGCATCAACCGGGCGCTTGTCGATCAGATCTCACGGCAGCTGGAGTCGGCCGGGCACCCCTTGCCGGTGTTCTTC GGCAACCGCAATTGGCATCCCATGGTGGAGGACACGGTTGCTGAGATGCGGGACAAGGGAATTCGGCGAGCAGCTGTTTT CACCACCTCGGCGTGGGGCGGGTATTCGGGCTGCAAGCAGTACGTGGAGGACATTGCCCGGGCCCGTGCAGCCGTCGGTG ACGGCGCGCCGGAGCTGGTCAAACTTCGTCAGTACTTCGACCACCCGTCCTTGGTGCAGCTGTACGCCGAGGCGGTGTCC GCCGCGATGTCGAGCCTGCGCGGTGAGGCGCGATTGGTGTTCACGGCTCATTCGATTCCCCTTGCGGCGGACCGGCGCCA CGGCCCCGAGCTCTACAGCCGGCAAGTGCATTACCTGGCGCAATTGGTTGCCGCCGCGACTGGTCACCAGGACTACGACG TGGTGTGGCAATCGCGTTCGGGCCCGCCTCAGGTTCCGTGGCTTGAGCCCGATATTGTCGATCACCTTGCGGCGCTGAAA GATCGAGGGATTCGATCGGTGGCAGTGGCGCCGATCGGGTTTGTGTCCGACCACCTGGAGGTGGTCTGGGACCTGGACAA CGAGGCTCGTGAATACGCGCAAGAGCACGATATCGAGCTCGTCCGGGCGGCCACGCCCGGTGCGGATGAACGATTCGCGC GCCTTGCGGTCGACTTGATCACTGAGGTCGTTGAGGGACGGCCGGCGTTACGGGCCAGTGGGGTGAACCCGGTCCCGGGG TACGGATTCAGTGTGAACGGCGCATTGTGCTCGCCCCTGTGCTGCGGTGTGCAGGAGGACTAG
Upstream 100 bases:
>100_bases GACGGTGTGCGCGCTGCTGTCCGACTGGTTGCCCGCCACCACCGGCGACATCATTTTCGCCGACGGCGGCGCTCACACTC AGCTGCTCTGACGGACTGCT
Downstream 100 bases:
>100_bases CGCGCGGCCCCGATAATGGCGCTGGCCGCAGCCATCCGTGCTTCGCGCACCACTAAGATCAGCGGCCGCAAAGCGTCGGA CACCGCACCATCATCGAGTG
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MLFDAVLLLSFGGPEGPQEVRPFLENVTRGRGIPPERLDEVAEHYFHFGGVSPINGINRALVDQISRQLESAGHPLPVFF GNRNWHPMVEDTVAEMRDKGIRRAAVFTTSAWGGYSGCKQYVEDIARARAAVGDGAPELVKLRQYFDHPSLVQLYAEAVS AAMSSLRGEARLVFTAHSIPLAADRRHGPELYSRQVHYLAQLVAAATGHQDYDVVWQSRSGPPQVPWLEPDIVDHLAALK DRGIRSVAVAPIGFVSDHLEVVWDLDNEAREYAQEHDIELVRAATPGADERFARLAVDLITEVVEGRPALRASGVNPVPG YGFSVNGALCSPLCCGVQED
Sequences:
>Translated_340_residues MLFDAVLLLSFGGPEGPQEVRPFLENVTRGRGIPPERLDEVAEHYFHFGGVSPINGINRALVDQISRQLESAGHPLPVFF GNRNWHPMVEDTVAEMRDKGIRRAAVFTTSAWGGYSGCKQYVEDIARARAAVGDGAPELVKLRQYFDHPSLVQLYAEAVS AAMSSLRGEARLVFTAHSIPLAADRRHGPELYSRQVHYLAQLVAAATGHQDYDVVWQSRSGPPQVPWLEPDIVDHLAALK DRGIRSVAVAPIGFVSDHLEVVWDLDNEAREYAQEHDIELVRAATPGADERFARLAVDLITEVVEGRPALRASGVNPVPG YGFSVNGALCSPLCCGVQED >Mature_340_residues MLFDAVLLLSFGGPEGPQEVRPFLENVTRGRGIPPERLDEVAEHYFHFGGVSPINGINRALVDQISRQLESAGHPLPVFF GNRNWHPMVEDTVAEMRDKGIRRAAVFTTSAWGGYSGCKQYVEDIARARAAVGDGAPELVKLRQYFDHPSLVQLYAEAVS AAMSSLRGEARLVFTAHSIPLAADRRHGPELYSRQVHYLAQLVAAATGHQDYDVVWQSRSGPPQVPWLEPDIVDHLAALK DRGIRSVAVAPIGFVSDHLEVVWDLDNEAREYAQEHDIELVRAATPGADERFARLAVDLITEVVEGRPALRASGVNPVPG YGFSVNGALCSPLCCGVQED
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family
Homologues:
Organism=Homo sapiens, GI60499021, Length=354, Percent_Identity=25.9887005649718, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI60499025, Length=354, Percent_Identity=25.9887005649718, Blast_Score=105, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6324750, Length=287, Percent_Identity=22.2996515679443, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI17864156, Length=358, Percent_Identity=26.8156424581006, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI45552018, Length=196, Percent_Identity=31.1224489795918, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEMH_MYCA9 (B1MC29)
Other databases:
- EMBL: CU458896 - RefSeq: YP_001703454.1 - ProteinModelPortal: B1MC29 - SMR: B1MC29 - EnsemblBacteria: EBMYCT00000006147 - GeneID: 5965229 - GenomeReviews: CU458896_GR - KEGG: mab:MAB_2721c - GeneTree: EBGT00050000016242 - HOGENOM: HBG697135 - OMA: GNRNWHP - ProtClustDB: PRK00035 - BioCyc: MABS561007:MAB_2721C-MONOMER - GO: GO:0005737 - HAMAP: MF_00323 - InterPro: IPR001015 - InterPro: IPR019772 - PANTHER: PTHR11108
Pfam domain/function: PF00762 Ferrochelatase
EC number: =4.99.1.1
Molecular weight: Translated: 37247; Mature: 37247
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFDAVLLLSFGGPEGPQEVRPFLENVTRGRGIPPERLDEVAEHYFHFGGVSPINGINRA CHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH LVDQISRQLESAGHPLPVFFGNRNWHPMVEDTVAEMRDKGIRRAAVFTTSAWGGYSGCKQ HHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHEEEECCCCCHHHHHH YVEDIARARAAVGDGAPELVKLRQYFDHPSLVQLYAEAVSAAMSSLRGEARLVFTAHSIP HHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC LAADRRHGPELYSRQVHYLAQLVAAATGHQDYDVVWQSRSGPPQVPWLEPDIVDHLAALK CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCCHHHHHHHHHHH DRGIRSVAVAPIGFVSDHLEVVWDLDNEAREYAQEHDIELVRAATPGADERFARLAVDLI HCCCCEEEECHHHHHHHHHHHEECCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHH TEVVEGRPALRASGVNPVPGYGFSVNGALCSPLCCGVQED HHHHCCCCCHHCCCCCCCCCCCEECCCHHHHHHHCCCCCC >Mature Secondary Structure MLFDAVLLLSFGGPEGPQEVRPFLENVTRGRGIPPERLDEVAEHYFHFGGVSPINGINRA CHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH LVDQISRQLESAGHPLPVFFGNRNWHPMVEDTVAEMRDKGIRRAAVFTTSAWGGYSGCKQ HHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHEEEECCCCCHHHHHH YVEDIARARAAVGDGAPELVKLRQYFDHPSLVQLYAEAVSAAMSSLRGEARLVFTAHSIP HHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC LAADRRHGPELYSRQVHYLAQLVAAATGHQDYDVVWQSRSGPPQVPWLEPDIVDHLAALK CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCCHHHHHHHHHHH DRGIRSVAVAPIGFVSDHLEVVWDLDNEAREYAQEHDIELVRAATPGADERFARLAVDLI HCCCCEEEECHHHHHHHHHHHEECCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHH TEVVEGRPALRASGVNPVPGYGFSVNGALCSPLCCGVQED HHHHCCCCCHHCCCCCCCCCCCEECCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA