| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169629764
Identifier: 169629764
GI number: 169629764
Start: 2720910
End: 2722640
Strand: Direct
Name: 169629764
Synonym: MAB_2679
Alternate gene names: NA
Gene position: 2720910-2722640 (Clockwise)
Preceding gene: 169629763
Following gene: 169629766
Centisome position: 53.7
GC content: 65.28
Gene sequence:
>1731_bases ATGGACCGGACCGCCAATCCCTTGTTCAAGGCGGGCATGGCCGCTATCACCGCGACCGCATTGATAGTCGCGCCCGCGGT GACACCACCTACGCGACAGTCAATCCCCCTGCCCGACATCCGATCCGCCTCCGTGCGACTGAGTTCGCTCGCGTTCACTC CGCGGGCCGCCGAGGTACCGGCGAGTCCCCTCGCCGCACTGAAGCTCTCGCTCTCACCCGCATCCGCCGCGCCGGCCAGT CCACTGAAGCGTGCACCGCTCGGCCAACTCGCCACCGCCGTGCAGCCGCGCGCCGCTGCCGCGCCATTGCCCACACCCGT GAGTGCTCCTACGCAGCCCGACGCAGCGACTGCGTCGAGTCCCGTAGTGGCGAGTTCCCTCACCAACGGCATCGACCAGG CCTACCAGTTCATCCAATACTGGGTCGACTACGGGGTCGACCTCGCGCAGTGGGGCGCCGGATTCGTGCCCGTCATCGGT GGCCTCGTGAGCGCTCAGATCGGCATCGTCTACGACAATCTCGTTCGGCCCATTGCCAACAGCTTTGTCTATAACCTGGT CGACCCGATCCTCAACGACCCGAGTTTCTCCAACATCGTGAACTCGTTTGGACGGTTCGGCAGTGACATCGTGAATTCCG TCATCAACTTCGCGTGGGCGGAAGCGCGCTATTTCCTTCCCCCGCTACCGCCGCTGCCCGGCTTGGCCCTTCAGACGACT ACCGATGCCAACGGCGCCGCACCCACCTCCGTCCACGAAGCATTGGTGCCGTTCACCAAGGCGTTCAAGGACGCCGAGGC ACATTTCGCGGAGGCGCTTGGCCTGACCAAGCCCGACCCCAAGTCGGCCGCACTGGAAAAGACCGGCACCGCAGCGCAAA CCGGAGAATCACTCAAGGAAACGACCGGGGAGTCCGTGCAGGAAGAGGGCAAGACCGCCGAGACGGGTGCTGCCACCGGC ACCAAGGAGGCGCTGGACCGCAAGGAATCCGCAGAAGGCAAGGCGTCCGCCAACGACAAAGCCACCGCTGTCGCCGAAAA GACCAAGGCCGGCGACAAGGCGACGACGGAGAGCAGGGAACCGGTCACCACGGCGACCGAGGCCGCCAAGGAATCCACCA AAGACTCAGTCAAGGACGCCGCCGTACCAGGAGTTGCGGCTGACTCCGACGCGGCCTCCGGGAATCTGACCAAGGGCACC CTGGCCGCGAAAGAGACGGGGAATCAGCAACAATCGGCGACGGACGGCAAACCTTCCCCCAGTTCCGCGCCCGCCGACAA GCCCGACAAGCCGGTCAAACCGAAGGTCCCCGCGGCCAGCACGACCGAGCATGGGTCCATCAGCGCGCAGGGCATTGTCC GCGGCCCTGTGTCGCAGTCAACGTCGGGACAGTCCGGCCCGTCGGCCTCCACCCCCAAAACTGCCGATTCCAAGGTTTCC AGCTCCGGCGCTTCTGGTTTCCAGACGTCGGATACCGGCACGCCGGAGAGCAAGATGTCCGACACGAAGACTGCCACCGG CACGACGGCCGGCACCAAAGCAACCGAGACGAAACCAAAAGCTGCCGAGACGAAGCCCTCCGACGCCAAGTCTTCCGGTT CGACGACATCGGGCACGAAATCTCCCGGCACCACCGCGCACGACTCGGCGAACAAGCCCTCGGCTTCGGCGAGCAGTGCG GCCAAATCCGGTGGCGAAGGGTCGAAATCAAGCAGCGGCAGCCACCGCTAG
Upstream 100 bases:
>100_bases GAGTTGCTGAACGACACACTCTCGTTGCGGGTGTCACGCAGCGGCGCCGCACCACGTACGCTGACGTCCGGGTCGTCACA ACAGAACACATAGGAGTGAG
Downstream 100 bases:
>100_bases CCCTTCCGGATCGCGGCGCTGTTGACTTCGGCTTGCGAGAAGTGTTGGAGCAGGAAGTCATTGAGGCGCCTCGTGGGTGC CGCACGGGTGGCTGTGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 576; Mature: 576
Protein sequence:
>576_residues MDRTANPLFKAGMAAITATALIVAPAVTPPTRQSIPLPDIRSASVRLSSLAFTPRAAEVPASPLAALKLSLSPASAAPAS PLKRAPLGQLATAVQPRAAAAPLPTPVSAPTQPDAATASSPVVASSLTNGIDQAYQFIQYWVDYGVDLAQWGAGFVPVIG GLVSAQIGIVYDNLVRPIANSFVYNLVDPILNDPSFSNIVNSFGRFGSDIVNSVINFAWAEARYFLPPLPPLPGLALQTT TDANGAAPTSVHEALVPFTKAFKDAEAHFAEALGLTKPDPKSAALEKTGTAAQTGESLKETTGESVQEEGKTAETGAATG TKEALDRKESAEGKASANDKATAVAEKTKAGDKATTESREPVTTATEAAKESTKDSVKDAAVPGVAADSDAASGNLTKGT LAAKETGNQQQSATDGKPSPSSAPADKPDKPVKPKVPAASTTEHGSISAQGIVRGPVSQSTSGQSGPSASTPKTADSKVS SSGASGFQTSDTGTPESKMSDTKTATGTTAGTKATETKPKAAETKPSDAKSSGSTTSGTKSPGTTAHDSANKPSASASSA AKSGGEGSKSSSGSHR
Sequences:
>Translated_576_residues MDRTANPLFKAGMAAITATALIVAPAVTPPTRQSIPLPDIRSASVRLSSLAFTPRAAEVPASPLAALKLSLSPASAAPAS PLKRAPLGQLATAVQPRAAAAPLPTPVSAPTQPDAATASSPVVASSLTNGIDQAYQFIQYWVDYGVDLAQWGAGFVPVIG GLVSAQIGIVYDNLVRPIANSFVYNLVDPILNDPSFSNIVNSFGRFGSDIVNSVINFAWAEARYFLPPLPPLPGLALQTT TDANGAAPTSVHEALVPFTKAFKDAEAHFAEALGLTKPDPKSAALEKTGTAAQTGESLKETTGESVQEEGKTAETGAATG TKEALDRKESAEGKASANDKATAVAEKTKAGDKATTESREPVTTATEAAKESTKDSVKDAAVPGVAADSDAASGNLTKGT LAAKETGNQQQSATDGKPSPSSAPADKPDKPVKPKVPAASTTEHGSISAQGIVRGPVSQSTSGQSGPSASTPKTADSKVS SSGASGFQTSDTGTPESKMSDTKTATGTTAGTKATETKPKAAETKPSDAKSSGSTTSGTKSPGTTAHDSANKPSASASSA AKSGGEGSKSSSGSHR >Mature_576_residues MDRTANPLFKAGMAAITATALIVAPAVTPPTRQSIPLPDIRSASVRLSSLAFTPRAAEVPASPLAALKLSLSPASAAPAS PLKRAPLGQLATAVQPRAAAAPLPTPVSAPTQPDAATASSPVVASSLTNGIDQAYQFIQYWVDYGVDLAQWGAGFVPVIG GLVSAQIGIVYDNLVRPIANSFVYNLVDPILNDPSFSNIVNSFGRFGSDIVNSVINFAWAEARYFLPPLPPLPGLALQTT TDANGAAPTSVHEALVPFTKAFKDAEAHFAEALGLTKPDPKSAALEKTGTAAQTGESLKETTGESVQEEGKTAETGAATG TKEALDRKESAEGKASANDKATAVAEKTKAGDKATTESREPVTTATEAAKESTKDSVKDAAVPGVAADSDAASGNLTKGT LAAKETGNQQQSATDGKPSPSSAPADKPDKPVKPKVPAASTTEHGSISAQGIVRGPVSQSTSGQSGPSASTPKTADSKVS SSGASGFQTSDTGTPESKMSDTKTATGTTAGTKATETKPKAAETKPSDAKSSGSTTSGTKSPGTTAHDSANKPSASASSA AKSGGEGSKSSSGSHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57947; Mature: 57947
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRTANPLFKAGMAAITATALIVAPAVTPPTRQSIPLPDIRSASVRLSSLAFTPRAAEVP CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC ASPLAALKLSLSPASAAPASPLKRAPLGQLATAVQPRAAAAPLPTPVSAPTQPDAATASS CCCHHHEEEECCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PVVASSLTNGIDQAYQFIQYWVDYGVDLAQWGAGFVPVIGGLVSAQIGIVYDNLVRPIAN CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SFVYNLVDPILNDPSFSNIVNSFGRFGSDIVNSVINFAWAEARYFLPPLPPLPGLALQTT HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC TDANGAAPTSVHEALVPFTKAFKDAEAHFAEALGLTKPDPKSAALEKTGTAAQTGESLKE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHH TTGESVQEEGKTAETGAATGTKEALDRKESAEGKASANDKATAVAEKTKAGDKATTESRE HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC PVTTATEAAKESTKDSVKDAAVPGVAADSDAASGNLTKGTLAAKETGNQQQSATDGKPSP CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHCCCCHHCCCCCCCCC SSAPADKPDKPVKPKVPAASTTEHGSISAQGIVRGPVSQSTSGQSGPSASTPKTADSKVS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHH SSGASGFQTSDTGTPESKMSDTKTATGTTAGTKATETKPKAAETKPSDAKSSGSTTSGTK CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPGTTAHDSANKPSASASSAAKSGGEGSKSSSGSHR CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MDRTANPLFKAGMAAITATALIVAPAVTPPTRQSIPLPDIRSASVRLSSLAFTPRAAEVP CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC ASPLAALKLSLSPASAAPASPLKRAPLGQLATAVQPRAAAAPLPTPVSAPTQPDAATASS CCCHHHEEEECCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PVVASSLTNGIDQAYQFIQYWVDYGVDLAQWGAGFVPVIGGLVSAQIGIVYDNLVRPIAN CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SFVYNLVDPILNDPSFSNIVNSFGRFGSDIVNSVINFAWAEARYFLPPLPPLPGLALQTT HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC TDANGAAPTSVHEALVPFTKAFKDAEAHFAEALGLTKPDPKSAALEKTGTAAQTGESLKE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHH TTGESVQEEGKTAETGAATGTKEALDRKESAEGKASANDKATAVAEKTKAGDKATTESRE HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC PVTTATEAAKESTKDSVKDAAVPGVAADSDAASGNLTKGTLAAKETGNQQQSATDGKPSP CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHCCCCHHCCCCCCCCC SSAPADKPDKPVKPKVPAASTTEHGSISAQGIVRGPVSQSTSGQSGPSASTPKTADSKVS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHH SSGASGFQTSDTGTPESKMSDTKTATGTTAGTKATETKPKAAETKPSDAKSSGSTTSGTK CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPGTTAHDSANKPSASASSAAKSGGEGSKSSSGSHR CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA