| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629761
Identifier: 169629761
GI number: 169629761
Start: 2717551
End: 2718906
Strand: Direct
Name: 169629761
Synonym: MAB_2676
Alternate gene names: NA
Gene position: 2717551-2718906 (Clockwise)
Preceding gene: 169629760
Following gene: 169629763
Centisome position: 53.63
GC content: 65.12
Gene sequence:
>1356_bases ATGAATGCCAGGGACCTTGAAGGGAGCGCAGGTATGGCATCGCACGACCTGGCGATATCTGCTGACGTCAAGTGGATCGG CGAGGCCCCCCACCAGAATGTCGAGCGGGGCGCACCGACACTGCTGCCCACCGAGGACCCCTTCTACCTACCGCCACTCG GCTACGAGCACGCCGCGCCCGGAACGGTGCTCCGCAGCCGCGACGTCGAAATGGCTTTTCTCGGCGTCATTCCCCAGCGA TTCACCGCGACCCAACTGCTCTACCGCAGCAATGACCTGAATCGGCGTGCGGACGCCGCAGTGACCACGGTCCTGATTCC CGACCACGACGATCCGGCCACGCCGGTGCCGATCGTGTCGTACCAGTGCGCCATCGACGCCGTGACCGACCGCTGCTTTC CTTCGTATGCGTTGCGGCGCGGTGCGCAGGCACTCGGCTCCTTCACCCAGTTCGAACTGCTCTTGATCGCCGCCCTGCTC GCTCAGGGCTGGGCGGTCTCCATTCCCGATCATGAGGGCGTCGACGGGAGCTGGGGTGCGCCTGACGAGCCCGGATATCG CACTCTCGACGGAATTCGCGCGGCCCTCAACTGCGACAGGCTCGGTCTCTCGCGGCAGGCACCCATCGGCTTGTGGGGCT ACTCCGGTGGAGGACTCGCCACGGCCTGGGCCGCCGAAGCCAGCGCCGATTATGCCCCCGAGCTTTCGATCACCGGTGCC GTCCTTGGGTCGCCCGTGGGCGATCTCGGCCATACCTTCCGCCGTCTCAACGGCGGGCTGTTCGCCGCGCTACCCGGCCT TGTCGTCGCCGCTCTCTCCCATGTATACCCAGGTCTAGAACGGGTGATCGAAGAGCACGCGACCACCAAGGGCAAGGAGT TCCTCGGTCGGCTCGAAGATATGCCCACCTTCCGGGCCATCATCGCCATGGCCTTCAAGGATATGGACGATTTGGTGGAC CGGCCGCTGGAGCAACTCCTGCAGACACCCGAGGTGCGGCACGTCTTCGACAGCATCAAGCTCGGCAAGACGGTGCCCAC CCCGCCGGTCCTGATCGTGCAAGCCGTGCACGACGAGATCATCTCGACGTCCTGCATCGACGAACTTGCCGATACCTACC GCGGTGGCGGCGCCGATGTGGCCTACCACCGCGATCTGCTCAATGAGCACATCCTGCTGCACCCCATGTCCGCGCCCATG TCGATGGAATGGCTCAGCGCCCGGTTCCGTGGCGAACCACTTCCGACGGGACCACGCAGGACGAGCTGGCCACTGGCATT CAAACCGTCGACCTATCTCGGCCTGCTCAAACTGGGTTGGATCGGCGCCAAGGTGCTCGGCGGACGTTCCCTCTAG
Upstream 100 bases:
>100_bases TCTGTACCGATTCACCGACGACCGGTACCGCGTCACCGACGAGTTCGCCGCGCTGCGCCCTCCCGGCTGACGGACTAGCT TCTTAGAGTCCTCTTAGGGT
Downstream 100 bases:
>100_bases CGAATCTCAGCTCTCCAGCGCGGCGATGGCCGCCGCTACCGCCGTCTTCTTCACCTGTCGGTGCGGACGGTCCGCGTATT CGATGGTGCAATCCGACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MNARDLEGSAGMASHDLAISADVKWIGEAPHQNVERGAPTLLPTEDPFYLPPLGYEHAAPGTVLRSRDVEMAFLGVIPQR FTATQLLYRSNDLNRRADAAVTTVLIPDHDDPATPVPIVSYQCAIDAVTDRCFPSYALRRGAQALGSFTQFELLLIAALL AQGWAVSIPDHEGVDGSWGAPDEPGYRTLDGIRAALNCDRLGLSRQAPIGLWGYSGGGLATAWAAEASADYAPELSITGA VLGSPVGDLGHTFRRLNGGLFAALPGLVVAALSHVYPGLERVIEEHATTKGKEFLGRLEDMPTFRAIIAMAFKDMDDLVD RPLEQLLQTPEVRHVFDSIKLGKTVPTPPVLIVQAVHDEIISTSCIDELADTYRGGGADVAYHRDLLNEHILLHPMSAPM SMEWLSARFRGEPLPTGPRRTSWPLAFKPSTYLGLLKLGWIGAKVLGGRSL
Sequences:
>Translated_451_residues MNARDLEGSAGMASHDLAISADVKWIGEAPHQNVERGAPTLLPTEDPFYLPPLGYEHAAPGTVLRSRDVEMAFLGVIPQR FTATQLLYRSNDLNRRADAAVTTVLIPDHDDPATPVPIVSYQCAIDAVTDRCFPSYALRRGAQALGSFTQFELLLIAALL AQGWAVSIPDHEGVDGSWGAPDEPGYRTLDGIRAALNCDRLGLSRQAPIGLWGYSGGGLATAWAAEASADYAPELSITGA VLGSPVGDLGHTFRRLNGGLFAALPGLVVAALSHVYPGLERVIEEHATTKGKEFLGRLEDMPTFRAIIAMAFKDMDDLVD RPLEQLLQTPEVRHVFDSIKLGKTVPTPPVLIVQAVHDEIISTSCIDELADTYRGGGADVAYHRDLLNEHILLHPMSAPM SMEWLSARFRGEPLPTGPRRTSWPLAFKPSTYLGLLKLGWIGAKVLGGRSL >Mature_451_residues MNARDLEGSAGMASHDLAISADVKWIGEAPHQNVERGAPTLLPTEDPFYLPPLGYEHAAPGTVLRSRDVEMAFLGVIPQR FTATQLLYRSNDLNRRADAAVTTVLIPDHDDPATPVPIVSYQCAIDAVTDRCFPSYALRRGAQALGSFTQFELLLIAALL AQGWAVSIPDHEGVDGSWGAPDEPGYRTLDGIRAALNCDRLGLSRQAPIGLWGYSGGGLATAWAAEASADYAPELSITGA VLGSPVGDLGHTFRRLNGGLFAALPGLVVAALSHVYPGLERVIEEHATTKGKEFLGRLEDMPTFRAIIAMAFKDMDDLVD RPLEQLLQTPEVRHVFDSIKLGKTVPTPPVLIVQAVHDEIISTSCIDELADTYRGGGADVAYHRDLLNEHILLHPMSAPM SMEWLSARFRGEPLPTGPRRTSWPLAFKPSTYLGLLKLGWIGAKVLGGRSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Lipase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005152 [H]
Pfam domain/function: PF03583 LIP [H]
EC number: NA
Molecular weight: Translated: 48705; Mature: 48705
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARDLEGSAGMASHDLAISADVKWIGEAPHQNVERGAPTLLPTEDPFYLPPLGYEHAAP CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC GTVLRSRDVEMAFLGVIPQRFTATQLLYRSNDLNRRADAAVTTVLIPDHDDPATPVPIVS CCEEECCCCCCCEEHHCCHHHHHHHHHHHCCCCCCHHCCEEEEEEEECCCCCCCCCCEEE YQCAIDAVTDRCFPSYALRRGAQALGSFTQFELLLIAALLAQGWAVSIPDHEGVDGSWGA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC PDEPGYRTLDGIRAALNCDRLGLSRQAPIGLWGYSGGGLATAWAAEASADYAPELSITGA CCCCCCHHHHHHHHHHCHHHCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCEECHH VLGSPVGDLGHTFRRLNGGLFAALPGLVVAALSHVYPGLERVIEEHATTKGKEFLGRLED HHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC MPTFRAIIAMAFKDMDDLVDRPLEQLLQTPEVRHVFDSIKLGKTVPTPPVLIVQAVHDEI CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHEEHHHHHHHH ISTSCIDELADTYRGGGADVAYHRDLLNEHILLHPMSAPMSMEWLSARFRGEPLPTGPRR HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCC TSWPLAFKPSTYLGLLKLGWIGAKVLGGRSL CCCCEEECCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNARDLEGSAGMASHDLAISADVKWIGEAPHQNVERGAPTLLPTEDPFYLPPLGYEHAAP CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC GTVLRSRDVEMAFLGVIPQRFTATQLLYRSNDLNRRADAAVTTVLIPDHDDPATPVPIVS CCEEECCCCCCCEEHHCCHHHHHHHHHHHCCCCCCHHCCEEEEEEEECCCCCCCCCCEEE YQCAIDAVTDRCFPSYALRRGAQALGSFTQFELLLIAALLAQGWAVSIPDHEGVDGSWGA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC PDEPGYRTLDGIRAALNCDRLGLSRQAPIGLWGYSGGGLATAWAAEASADYAPELSITGA CCCCCCHHHHHHHHHHCHHHCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCEECHH VLGSPVGDLGHTFRRLNGGLFAALPGLVVAALSHVYPGLERVIEEHATTKGKEFLGRLED HHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC MPTFRAIIAMAFKDMDDLVDRPLEQLLQTPEVRHVFDSIKLGKTVPTPPVLIVQAVHDEI CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHEEHHHHHHHH ISTSCIDELADTYRGGGADVAYHRDLLNEHILLHPMSAPMSMEWLSARFRGEPLPTGPRR HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCC TSWPLAFKPSTYLGLLKLGWIGAKVLGGRSL CCCCEEECCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]