| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629720
Identifier: 169629720
GI number: 169629720
Start: 2676331
End: 2678025
Strand: Reverse
Name: 169629720
Synonym: MAB_2635c
Alternate gene names: NA
Gene position: 2678025-2676331 (Counterclockwise)
Preceding gene: 169629721
Following gene: 169629713
Centisome position: 52.85
GC content: 60.18
Gene sequence:
>1695_bases GTGACCGACACTCTCGACACGACTGCATCCGCACCCGTTTCGTCTGCTCCGTCCAGCCACGACGTCGCCGAAAGCGCAGC CCTCCGGGAGACGTTGGAGGACTACACACTCCGTTTCGCGCCCAGGCGTTTTCGGCGCTGGAGCCCTGCCGTCGTCGGAG TCACCGCCCTGGGCGGAATCGCCTACCTGGCTGATTTCGCGATCGGTGCCAACATCGGAATTTCCTACGGCACCGGAAAT GCCCTGTGGGGAATCGGTGTTTTCGCGGTCATCATCATCCTGACCGGTATCCCGTTGTCCTATTACGCCGCCCGCTACAA CATCGATCTCGACTTGATCACGCGGGGAAGCGGATTCGGCTACTACGGCAGCATCGTCACCAACATCATCTATGCGACAT TCACCTTCATATTCTTCGCCCTCGAGGGATCGATCATGGCCCAGGGGCTCAAACTCGGGCTGGGCGTACCGTTGCCGGTC GGATACGCGATGTCCACCATCATCATTATTCCGCTGGTGATCTACGGGATGAAGGCGCTCTCGGTACTGCAGGTGTGGAC CACCCCGTTGTGGCTTGTCATGATGGTCATCCCCTTCGTCTACCTTCTTGTGCGTCATCCGGATTCGATCGGCGCATTCT TCGCATACGGCGGTAAGGATGGGCAGGGGGTCAACCTGGGCTCGATCATGCTCGCGGCGGGCGTCTGTCTTTCCTTGATC GCCCAGATCGCCGAGCAGATCGACTATCTGCGGTTCATGCCGCCGAAGACCCCGGAGAACAGCCGCCGGTGGTGGACAGC GATGTTGTTGGCCGGCCCCGGTTGGGTACTTTTTGGTGCGATCAAGCAGGTGATCGGGCTGTTTCTGGCGGTCTACCTCA TCGCCAACGTGGCGGGCGGGGCCACGGTCGCCAACCAGCCGGTGCATCAGTTCCTGGAGATCTACCAGAACATGATGCCG CACTGGCTTGCGATCACCCTGGCGGTGATCCTCGTGGTGATCAGCCAAATCAAGATCAATGTCACCAACGCGTACTCGGG CTCGCTGGCGTGGACCAATTCTTTCACCCGCATCACCAAGCACTACCCGGGCCGACTGATCTTTGTACTGTTCAACCTGC TGATCGCGCTGGTTCTGATGGAAGCCAACATGTTCGACTTCCTCAACACCATCCTCGGGTTCTATGCCAATTGCGGTATG GCTTGGGTGGTGACCGTCGCATCCGATATCGCGATCAACAAATACCTGCTCAAACTCTCACCCAAGGAACCGGAGTTCCG GCGAGGCATGCTCTACGACGTGAACCCGGTCGGCTTCGTGTCGATGCTGCTCTCGGCGGGTATATCGATCCTGGTCTTCT TCGGGGTGTTCGGCGCGACCATCCGTCCTTATTCGCCGATCGTGGCGGTTGTCATCGCCTTCGTGCTGCCTCCGATCCTG GCACTGGTAACCCGCGGCAGGTACTACCTGCGGCGCAGCGATGACGGTATCGATCTGCCCATGTATGACGAGTACGGCAA CCCGTCCGGGGAGTTGCTTCACTGCGCGGTGAGCGGCATCGAGTTCGAGCGTCCCGACATGCTTGCCTCGGCCAAGCCCG GCCCCAATGGCGAGGTTCAGTACGTCTCATCGCTCAGCCTGGCGACCGACCGGATCGGTGAGCATGTGCTGCCCGCCGAT CCGCCCAGACCGTAG
Upstream 100 bases:
>100_bases TGCCCCGGTTGCGGGTCAACGTGGCTAGGGGGCCTGCCGCGTAACAGGACATTAACGTCGGGAAAACGCGCACGAATTGG GCGGTGGACAGGCTGTCCGC
Downstream 100 bases:
>100_bases CGATCAGGGCTTGGAGGTGCCGGCCTTCTCGTTCATCCGCTTCTCGAAATCGTTCTGGCACTGGGTGGCCTTGGCCTGAT CGCCTTTGACATCGGACAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Histidine Kinase; Sensor Histidine Kinase/Response Regulator; Two-Component Hybrid Sensor And Regulator; Periplasmic Sensor Hybrid Histidine Kinase; Permease For Cytosine/Purines Uracil Thiamine Allantoin; Signal Transduction Histidine Kinase; Two Component Sensor Kinase; ATPase Histidine Kinase- DNA Gyrase B- And; Two-Component Sensor Histidine Kinase Protein; Two Component Hybrid Sensor Histidine Kinase And Regulator; Two-Component Sensor Kinase; NCS1 Family Transporter; Sensor Histidine Kinase; Sensor Histidine Kinase/Response Regulator Protein; Fused Histidine Kinase Sensor/Response Regulator; Two-Component Sensor Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; Integral Membrane Protein; Sensory Box Histidine Kinase; Cytosine Permease; Permease For Cytosine/Purine Uracil Thiamine Allantoin; Purine-Cytosine Permease
Number of amino acids: Translated: 564; Mature: 563
Protein sequence:
>564_residues MTDTLDTTASAPVSSAPSSHDVAESAALRETLEDYTLRFAPRRFRRWSPAVVGVTALGGIAYLADFAIGANIGISYGTGN ALWGIGVFAVIIILTGIPLSYYAARYNIDLDLITRGSGFGYYGSIVTNIIYATFTFIFFALEGSIMAQGLKLGLGVPLPV GYAMSTIIIIPLVIYGMKALSVLQVWTTPLWLVMMVIPFVYLLVRHPDSIGAFFAYGGKDGQGVNLGSIMLAAGVCLSLI AQIAEQIDYLRFMPPKTPENSRRWWTAMLLAGPGWVLFGAIKQVIGLFLAVYLIANVAGGATVANQPVHQFLEIYQNMMP HWLAITLAVILVVISQIKINVTNAYSGSLAWTNSFTRITKHYPGRLIFVLFNLLIALVLMEANMFDFLNTILGFYANCGM AWVVTVASDIAINKYLLKLSPKEPEFRRGMLYDVNPVGFVSMLLSAGISILVFFGVFGATIRPYSPIVAVVIAFVLPPIL ALVTRGRYYLRRSDDGIDLPMYDEYGNPSGELLHCAVSGIEFERPDMLASAKPGPNGEVQYVSSLSLATDRIGEHVLPAD PPRP
Sequences:
>Translated_564_residues MTDTLDTTASAPVSSAPSSHDVAESAALRETLEDYTLRFAPRRFRRWSPAVVGVTALGGIAYLADFAIGANIGISYGTGN ALWGIGVFAVIIILTGIPLSYYAARYNIDLDLITRGSGFGYYGSIVTNIIYATFTFIFFALEGSIMAQGLKLGLGVPLPV GYAMSTIIIIPLVIYGMKALSVLQVWTTPLWLVMMVIPFVYLLVRHPDSIGAFFAYGGKDGQGVNLGSIMLAAGVCLSLI AQIAEQIDYLRFMPPKTPENSRRWWTAMLLAGPGWVLFGAIKQVIGLFLAVYLIANVAGGATVANQPVHQFLEIYQNMMP HWLAITLAVILVVISQIKINVTNAYSGSLAWTNSFTRITKHYPGRLIFVLFNLLIALVLMEANMFDFLNTILGFYANCGM AWVVTVASDIAINKYLLKLSPKEPEFRRGMLYDVNPVGFVSMLLSAGISILVFFGVFGATIRPYSPIVAVVIAFVLPPIL ALVTRGRYYLRRSDDGIDLPMYDEYGNPSGELLHCAVSGIEFERPDMLASAKPGPNGEVQYVSSLSLATDRIGEHVLPAD PPRP >Mature_563_residues TDTLDTTASAPVSSAPSSHDVAESAALRETLEDYTLRFAPRRFRRWSPAVVGVTALGGIAYLADFAIGANIGISYGTGNA LWGIGVFAVIIILTGIPLSYYAARYNIDLDLITRGSGFGYYGSIVTNIIYATFTFIFFALEGSIMAQGLKLGLGVPLPVG YAMSTIIIIPLVIYGMKALSVLQVWTTPLWLVMMVIPFVYLLVRHPDSIGAFFAYGGKDGQGVNLGSIMLAAGVCLSLIA QIAEQIDYLRFMPPKTPENSRRWWTAMLLAGPGWVLFGAIKQVIGLFLAVYLIANVAGGATVANQPVHQFLEIYQNMMPH WLAITLAVILVVISQIKINVTNAYSGSLAWTNSFTRITKHYPGRLIFVLFNLLIALVLMEANMFDFLNTILGFYANCGMA WVVTVASDIAINKYLLKLSPKEPEFRRGMLYDVNPVGFVSMLLSAGISILVFFGVFGATIRPYSPIVAVVIAFVLPPILA LVTRGRYYLRRSDDGIDLPMYDEYGNPSGELLHCAVSGIEFERPDMLASAKPGPNGEVQYVSSLSLATDRIGEHVLPADP PRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61403; Mature: 61272
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTLDTTASAPVSSAPSSHDVAESAALRETLEDYTLRFAPRRFRRWSPAVVGVTALGGI CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHH AYLADFAIGANIGISYGTGNALWGIGVFAVIIILTGIPLSYYAARYNIDLDLITRGSGFG HHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHEEEECEEEEEECCCCCC YYGSIVTNIIYATFTFIFFALEGSIMAQGLKLGLGVPLPVGYAMSTIIIIPLVIYGMKAL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH SVLQVWTTPLWLVMMVIPFVYLLVRHPDSIGAFFAYGGKDGQGVNLGSIMLAAGVCLSLI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH AQIAEQIDYLRFMPPKTPENSRRWWTAMLLAGPGWVLFGAIKQVIGLFLAVYLIANVAGG HHHHHHHHHHHCCCCCCCCCCCHHEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC ATVANQPVHQFLEIYQNMMPHWLAITLAVILVVISQIKINVTNAYSGSLAWTNSFTRITK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEECCHHHHHHH HYPGRLIFVLFNLLIALVLMEANMFDFLNTILGFYANCGMAWVVTVASDIAINKYLLKLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEC PKEPEFRRGMLYDVNPVGFVSMLLSAGISILVFFGVFGATIRPYSPIVAVVIAFVLPPIL CCCCHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH ALVTRGRYYLRRSDDGIDLPMYDEYGNPSGELLHCAVSGIEFERPDMLASAKPGPNGEVQ HHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHCCCCCCCCCCEE YVSSLSLATDRIGEHVLPADPPRP EHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TDTLDTTASAPVSSAPSSHDVAESAALRETLEDYTLRFAPRRFRRWSPAVVGVTALGGI CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHH AYLADFAIGANIGISYGTGNALWGIGVFAVIIILTGIPLSYYAARYNIDLDLITRGSGFG HHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHEEEECEEEEEECCCCCC YYGSIVTNIIYATFTFIFFALEGSIMAQGLKLGLGVPLPVGYAMSTIIIIPLVIYGMKAL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH SVLQVWTTPLWLVMMVIPFVYLLVRHPDSIGAFFAYGGKDGQGVNLGSIMLAAGVCLSLI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH AQIAEQIDYLRFMPPKTPENSRRWWTAMLLAGPGWVLFGAIKQVIGLFLAVYLIANVAGG HHHHHHHHHHHCCCCCCCCCCCHHEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC ATVANQPVHQFLEIYQNMMPHWLAITLAVILVVISQIKINVTNAYSGSLAWTNSFTRITK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEECCHHHHHHH HYPGRLIFVLFNLLIALVLMEANMFDFLNTILGFYANCGMAWVVTVASDIAINKYLLKLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEC PKEPEFRRGMLYDVNPVGFVSMLLSAGISILVFFGVFGATIRPYSPIVAVVIAFVLPPIL CCCCHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH ALVTRGRYYLRRSDDGIDLPMYDEYGNPSGELLHCAVSGIEFERPDMLASAKPGPNGEVQ HHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHCCCCCCCCCCEE YVSSLSLATDRIGEHVLPADPPRP EHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA