| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is yaeQ [H]
Identifier: 169629664
GI number: 169629664
Start: 2623204
End: 2623755
Strand: Reverse
Name: yaeQ [H]
Synonym: MAB_2578c
Alternate gene names: 169629664
Gene position: 2623755-2623204 (Counterclockwise)
Preceding gene: 169629666
Following gene: 169629662
Centisome position: 51.78
GC content: 64.13
Gene sequence:
>552_bases GTGGCCCTTTCTGCAACAGTTTTCAAAGTCGAACTTGGCATCTCCGATGTCGATCACGGCTACTACGCCGATCACGCGCT GACCGTGGCCCGCCATCCCAGCGAGACCGATGAACGGATGGTGGTGCGGTTGTTGGCTTTTGGGCTTCGTGCACACCGAC TCAGCGATGTCGACGGCGAGTTGGCGTTCGGGCCAGGCCTGTCCACTCCTGGTGTACCGGACTTGCGGCTAGCCGACTAC ACCGGCCGGATCCTGGAATGGATCAACGTCGGCCAGCCCGATGAACGCGCATTGGGCAAGGCGGCCAGCCAGGCCGAACA GGTGCTGCTCTTCCCGTTCGCCGCCGGCGTGGCGACCTGGTGGCGCACCGCCGGCCCCAAAGTGGCGGGGCTGTCGAACC TGTCGGTAGTGCAGATACCGCATGCGGCGGTGCAGCAACTGGCCCAGACTGTCGATCGACGGGTCTCGGCGCAGGTGATG GTGATCGAGGGTCAGGTGACGATGACCATAGGCGGGGTCGACGTCACCTTCACGCCCGCGCCATTGGAGTAA
Upstream 100 bases:
>100_bases GCGTGCCTGGTGGCGACTCGAACTGGCGTCTGGCTCGTCGGCCCGACCACTGAATGCGGCCCGCCTGCTCGGGGCGCACC ACTTGGGTGGACACTATGAC
Downstream 100 bases:
>100_bases ACGACTGAGCCCGAGGTGCTAGTCGATAGCATCACCGTCTTGGATTCCGATCAGGTCAATCATGTTCACTGGCGCCATCA AGGCTGGGAAGCGGCCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MALSATVFKVELGISDVDHGYYADHALTVARHPSETDERMVVRLLAFGLRAHRLSDVDGELAFGPGLSTPGVPDLRLADY TGRILEWINVGQPDERALGKAASQAEQVLLFPFAAGVATWWRTAGPKVAGLSNLSVVQIPHAAVQQLAQTVDRRVSAQVM VIEGQVTMTIGGVDVTFTPAPLE
Sequences:
>Translated_183_residues MALSATVFKVELGISDVDHGYYADHALTVARHPSETDERMVVRLLAFGLRAHRLSDVDGELAFGPGLSTPGVPDLRLADY TGRILEWINVGQPDERALGKAASQAEQVLLFPFAAGVATWWRTAGPKVAGLSNLSVVQIPHAAVQQLAQTVDRRVSAQVM VIEGQVTMTIGGVDVTFTPAPLE >Mature_182_residues ALSATVFKVELGISDVDHGYYADHALTVARHPSETDERMVVRLLAFGLRAHRLSDVDGELAFGPGLSTPGVPDLRLADYT GRILEWINVGQPDERALGKAASQAEQVLLFPFAAGVATWWRTAGPKVAGLSNLSVVQIPHAAVQQLAQTVDRRVSAQVMV IEGQVTMTIGGVDVTFTPAPLE
Specific function: Unknown
COG id: COG4681
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786388, Length=182, Percent_Identity=35.1648351648352, Blast_Score=108, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009822 [H]
Pfam domain/function: PF07152 YaeQ [H]
EC number: NA
Molecular weight: Translated: 19598; Mature: 19466
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSATVFKVELGISDVDHGYYADHALTVARHPSETDERMVVRLLAFGLRAHRLSDVDGE CCCCEEEEEEEECCCCCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCC LAFGPGLSTPGVPDLRLADYTGRILEWINVGQPDERALGKAASQAEQVLLFPFAAGVATW EEECCCCCCCCCCCCEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEEHHHHHHHH WRTAGPKVAGLSNLSVVQIPHAAVQQLAQTVDRRVSAQVMVIEGQVTMTIGGVDVTFTPA HHCCCCCEECCCCCEEEEECHHHHHHHHHHHHHHCCEEEEEEECEEEEEECCEEEEECCC PLE CCC >Mature Secondary Structure ALSATVFKVELGISDVDHGYYADHALTVARHPSETDERMVVRLLAFGLRAHRLSDVDGE CCCEEEEEEEECCCCCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCC LAFGPGLSTPGVPDLRLADYTGRILEWINVGQPDERALGKAASQAEQVLLFPFAAGVATW EEECCCCCCCCCCCCEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEEHHHHHHHH WRTAGPKVAGLSNLSVVQIPHAAVQQLAQTVDRRVSAQVMVIEGQVTMTIGGVDVTFTPA HHCCCCCEECCCCCEEEEECHHHHHHHHHHHHHHCCEEEEEEECEEEEEECCEEEEECCC PLE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]