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The map label for this gene is speA [H]

Identifier: 169629610

GI number: 169629610

Start: 2573456

End: 2574922

Strand: Direct

Name: speA [H]

Synonym: MAB_2524

Alternate gene names: 169629610

Gene position: 2573456-2574922 (Clockwise)

Preceding gene: 169629604

Following gene: 169629613

Centisome position: 50.79

GC content: 63.6

Gene sequence:

>1467_bases
ATGGACCATACCCAGACACCATTCCTGGATGCCGTGGACCGTTACCACCGAGACAACCGTTACGGATTCACCCCGCCGGG
CCACCGACAAGGACGCGGGGTCGATGCGCGTGTGACCGGGATCATGGGAATGGACCCGTTTCGCTGCGATCTTCTCGCCA
GTGGCGGCCTGGACGACAGGAAATCGTCCGGGCACTACTTGGCACAGGCAGAGGAACTGATGGCAGACGCGGTGGGCGCG
TCATCAGCCTTCTTTTCCACCTGTGGCAGTTCACTTTCGGTGAAGGCCGCGATGATGGCAGTAGCCGGTGGGTGCGAAGG
CGGGTTACTGGTCGGGCGCGACAGCCACAAGTCGATCATCGCCGGCTTGATCTTCTCCGGCGTGCAGCCGCGCTGGATCA
CACCGCGATGGGACGCCCAGCGGCATATCTCCCATCCGCCCTCTCCGCGCCAGGTAGAGGAGGCATGGCAGCAGCACCCG
GATGCGGCCGGCGCCTTGATCGTCAGCCCCAGCCCCTATGGCACCTGTGCGGATATCGGGGCCATTGCGCAGGTATGTCA
TCGTCGCGGTAAGCCATTGATCGTCGACGAGGCATGGGGAGCTCATCTGCCCTTCCATGAGGAACTGCCGACGTGGGCCA
TGGATGCCGGGGCCGATGTCTGTGTTGTCAGCGTGCACAAGATGGGGGCGGGATTCGAACAAGGCTCGGTGTTTCACCTA
CAAGGTGATCGTGTCGATCCCGCGCGCCTGTCGGCATGCGCCGATCTGTTGATGACCACCAGCCCCAATGTGATGGTCTA
TGCCGCGATGGACGGCTGGCGCCGCCAGATGGTCGAGCATGGCCACGAATTGCTTTCCCATGCTCTCGATCTGGCCGAGC
AGGTGCGAGGCGAAATCGCCGATATCGCCGATGTGCAGGTCATGGAATCGGAACTGCTCGGAGCGGAGGCCTCCCACGAT
CTGGACCGTCTGCAGGTGCTCGTTGACATCTCGCAGACCGGCACCTCCGGCTACCAAGCAGCGGATTGGTTGCGCCAGCA
CAAACAACTGGATCTGGGGCTGAGCGATCACCGTCGATTCCTTGCGACGATGTCGATCGCGGACCGGGACTTGACGGTGG
AGCGACTGCTGGGGTCGCTTTCTGCCTGGCGGGCGGCGGCCGAGGATTTTCCGCGCCCGCGGCCCCTCTATCTACCACCG
CCGCAGCAGTTGCAATTGGAAAGTGTGATGTTGCCGCGCGACGCGTTCTTCGGTCCCACGGATACGGTGGCGATCGGCGA
TGCGGCGGGCCACATTGCGGCTGAGCAGGTTACGCCCTATCCGCCGGGAATTCCGGTGGTGGTGCCCGGCGAGCGGCTGA
CCAGCCCCGTGCTCGAGTACCTGCGTTCAGGTGTGAAAGCGGGCATGATGGTGCCTGACCCCGCGGACTCGTCGCTGGAA
ACCATTCGGGTGACGGCCGAACGCTAG

Upstream 100 bases:

>100_bases
TCTGGAGTGGCCGTTGTGGACACTCGCGACACGTGGACTCGGCAGTTGTCGAGGCGGCGGGTCTTAAGTACATCGGCAAC
GGACTACCGGAAGGATTCTG

Downstream 100 bases:

>100_bases
CCGATCAGTGCGATTGCGGCAGTGGGGCCATGTGATCGCCCGTCGCTTGGAAATAGACCTGGCGTGCGATATCGACGGCG
TGGTCGGCGAATCGTTCGTA

Product: putative Orn/Lys/Arg decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MDHTQTPFLDAVDRYHRDNRYGFTPPGHRQGRGVDARVTGIMGMDPFRCDLLASGGLDDRKSSGHYLAQAEELMADAVGA
SSAFFSTCGSSLSVKAAMMAVAGGCEGGLLVGRDSHKSIIAGLIFSGVQPRWITPRWDAQRHISHPPSPRQVEEAWQQHP
DAAGALIVSPSPYGTCADIGAIAQVCHRRGKPLIVDEAWGAHLPFHEELPTWAMDAGADVCVVSVHKMGAGFEQGSVFHL
QGDRVDPARLSACADLLMTTSPNVMVYAAMDGWRRQMVEHGHELLSHALDLAEQVRGEIADIADVQVMESELLGAEASHD
LDRLQVLVDISQTGTSGYQAADWLRQHKQLDLGLSDHRRFLATMSIADRDLTVERLLGSLSAWRAAAEDFPRPRPLYLPP
PQQLQLESVMLPRDAFFGPTDTVAIGDAAGHIAAEQVTPYPPGIPVVVPGERLTSPVLEYLRSGVKAGMMVPDPADSSLE
TIRVTAER

Sequences:

>Translated_488_residues
MDHTQTPFLDAVDRYHRDNRYGFTPPGHRQGRGVDARVTGIMGMDPFRCDLLASGGLDDRKSSGHYLAQAEELMADAVGA
SSAFFSTCGSSLSVKAAMMAVAGGCEGGLLVGRDSHKSIIAGLIFSGVQPRWITPRWDAQRHISHPPSPRQVEEAWQQHP
DAAGALIVSPSPYGTCADIGAIAQVCHRRGKPLIVDEAWGAHLPFHEELPTWAMDAGADVCVVSVHKMGAGFEQGSVFHL
QGDRVDPARLSACADLLMTTSPNVMVYAAMDGWRRQMVEHGHELLSHALDLAEQVRGEIADIADVQVMESELLGAEASHD
LDRLQVLVDISQTGTSGYQAADWLRQHKQLDLGLSDHRRFLATMSIADRDLTVERLLGSLSAWRAAAEDFPRPRPLYLPP
PQQLQLESVMLPRDAFFGPTDTVAIGDAAGHIAAEQVTPYPPGIPVVVPGERLTSPVLEYLRSGVKAGMMVPDPADSSLE
TIRVTAER
>Mature_488_residues
MDHTQTPFLDAVDRYHRDNRYGFTPPGHRQGRGVDARVTGIMGMDPFRCDLLASGGLDDRKSSGHYLAQAEELMADAVGA
SSAFFSTCGSSLSVKAAMMAVAGGCEGGLLVGRDSHKSIIAGLIFSGVQPRWITPRWDAQRHISHPPSPRQVEEAWQQHP
DAAGALIVSPSPYGTCADIGAIAQVCHRRGKPLIVDEAWGAHLPFHEELPTWAMDAGADVCVVSVHKMGAGFEQGSVFHL
QGDRVDPARLSACADLLMTTSPNVMVYAAMDGWRRQMVEHGHELLSHALDLAEQVRGEIADIADVQVMESELLGAEASHD
LDRLQVLVDISQTGTSGYQAADWLRQHKQLDLGLSDHRRFLATMSIADRDLTVERLLGSLSAWRAAAEDFPRPRPLYLPP
PQQLQLESVMLPRDAFFGPTDTVAIGDAAGHIAAEQVTPYPPGIPVVVPGERLTSPVLEYLRSGVKAGMMVPDPADSSLE
TIRVTAER

Specific function: Catalyzes the formation of agmatine from arginine [H]

COG id: COG1982

COG function: function code E; Arginine/lysine/ornithine decarboxylases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Orn/Lys/Arg decarboxylase class-I family [H]

Homologues:

Organism=Escherichia coli, GI1786384, Length=324, Percent_Identity=25.3086419753086, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000310
- InterPro:   IPR008286
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF01276 OKR_DC_1; PF03711 OKR_DC_1_C [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 52858; Mature: 52858

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHTQTPFLDAVDRYHRDNRYGFTPPGHRQGRGVDARVTGIMGMDPFRCDLLASGGLDDR
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHEEECCCCCCC
KSSGHYLAQAEELMADAVGASSAFFSTCGSSLSVKAAMMAVAGGCEGGLLVGRDSHKSII
CCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHH
AGLIFSGVQPRWITPRWDAQRHISHPPSPRQVEEAWQQHPDAAGALIVSPSPYGTCADIG
HHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHH
AIAQVCHRRGKPLIVDEAWGAHLPFHEELPTWAMDAGADVCVVSVHKMGAGFEQGSVFHL
HHHHHHHHCCCEEEEECCCCCCCCCHHCCCCHHHCCCCCEEEEEEHHHCCCCCCCCEEEE
QGDRVDPARLSACADLLMTTSPNVMVYAAMDGWRRQMVEHGHELLSHALDLAEQVRGEIA
ECCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIADVQVMESELLGAEASHDLDRLQVLVDISQTGTSGYQAADWLRQHKQLDLGLSDHRRF
HHHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LATMSIADRDLTVERLLGSLSAWRAAAEDFPRPRPLYLPPPQQLQLESVMLPRDAFFGPT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHCCCCC
DTVAIGDAAGHIAAEQVTPYPPGIPVVVPGERLTSPVLEYLRSGVKAGMMVPDPADSSLE
CCEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
TIRVTAER
EEEEEECC
>Mature Secondary Structure
MDHTQTPFLDAVDRYHRDNRYGFTPPGHRQGRGVDARVTGIMGMDPFRCDLLASGGLDDR
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHEEECCCCCCC
KSSGHYLAQAEELMADAVGASSAFFSTCGSSLSVKAAMMAVAGGCEGGLLVGRDSHKSII
CCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHH
AGLIFSGVQPRWITPRWDAQRHISHPPSPRQVEEAWQQHPDAAGALIVSPSPYGTCADIG
HHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHH
AIAQVCHRRGKPLIVDEAWGAHLPFHEELPTWAMDAGADVCVVSVHKMGAGFEQGSVFHL
HHHHHHHHCCCEEEEECCCCCCCCCHHCCCCHHHCCCCCEEEEEEHHHCCCCCCCCEEEE
QGDRVDPARLSACADLLMTTSPNVMVYAAMDGWRRQMVEHGHELLSHALDLAEQVRGEIA
ECCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIADVQVMESELLGAEASHDLDRLQVLVDISQTGTSGYQAADWLRQHKQLDLGLSDHRRF
HHHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LATMSIADRDLTVERLLGSLSAWRAAAEDFPRPRPLYLPPPQQLQLESVMLPRDAFFGPT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHCCCCC
DTVAIGDAAGHIAAEQVTPYPPGIPVVVPGERLTSPVLEYLRSGVKAGMMVPDPADSSLE
CCEEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
TIRVTAER
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]