| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629598
Identifier: 169629598
GI number: 169629598
Start: 2566796
End: 2567218
Strand: Direct
Name: 169629598
Synonym: MAB_2512
Alternate gene names: NA
Gene position: 2566796-2567218 (Clockwise)
Preceding gene: 169629597
Following gene: 169629604
Centisome position: 50.66
GC content: 58.63
Gene sequence:
>423_bases ATGTCTGTCATTGACCAAAATGCATCACGATTCGCGGCTCGAGCCAAAACCGGTGTGGTTTCGCTGTTTTCGTCAGCAGA CGACACCGCAAGGTTCACGGCACACTGGCACCGCCCGTCTGCGGTGTTGGTGCGAGCCACCGGCGAGATCGATGCAGTAA ACGCTAATCACCTGGCCGAGTACGCGACCCGCTATTTGGACGGACACCGGACCTTGGTGCTCGATCTGCAGGGCCTGCGG TTTTTCGGAACTGATGGACTGGTGGCCTTGGATAGGGTGCGACGTCACTGCAAGGTACAGGGGATCGACTGGACGGTCAT ACCGGGGGATGCCGTCACAAAGCTGCTCACCCTGAGCGGTGATATGGCCGCCTACCCAGTGAACGACGCGATACCCGACG TATGGAAGAAGTTGGCACAGTAG
Upstream 100 bases:
>100_bases GGGTCTACTCGATGCCAGCGCAGAGCGCGGGCTTCTGCCCGGGCGACTGGCCTGGTGTCTCCGATCCGAAAAGAACGTAC ATTTCGATCGATGGAGTCAT
Downstream 100 bases:
>100_bases CGGCGTAGCCGGTGGAAGAAGTTGGCACAGTAGCCGCGTAGCGGGCTCCGCTACCCGTTCGCCACGCGGACAGCGGAGCC GGTGTCGCGTAGCTTGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Sulfate Transporter/Antisigma-Factor
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSVIDQNASRFAARAKTGVVSLFSSADDTARFTAHWHRPSAVLVRATGEIDAVNANHLAEYATRYLDGHRTLVLDLQGLR FFGTDGLVALDRVRRHCKVQGIDWTVIPGDAVTKLLTLSGDMAAYPVNDAIPDVWKKLAQ
Sequences:
>Translated_140_residues MSVIDQNASRFAARAKTGVVSLFSSADDTARFTAHWHRPSAVLVRATGEIDAVNANHLAEYATRYLDGHRTLVLDLQGLR FFGTDGLVALDRVRRHCKVQGIDWTVIPGDAVTKLLTLSGDMAAYPVNDAIPDVWKKLAQ >Mature_139_residues SVIDQNASRFAARAKTGVVSLFSSADDTARFTAHWHRPSAVLVRATGEIDAVNANHLAEYATRYLDGHRTLVLDLQGLRF FGTDGLVALDRVRRHCKVQGIDWTVIPGDAVTKLLTLSGDMAAYPVNDAIPDVWKKLAQ
Specific function: Unknown
COG id: COG1366
COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15347; Mature: 15215
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIDQNASRFAARAKTGVVSLFSSADDTARFTAHWHRPSAVLVRATGEIDAVNANHLAE CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCEECCCHHHHHH YATRYLDGHRTLVLDLQGLRFFGTDGLVALDRVRRHCKVQGIDWTVIPGDAVTKLLTLSG HHHHHHCCCEEEEEEECCCEEECCCCHHHHHHHHHHCEECCCEEEEECHHHHHHHHHCCC DMAAYPVNDAIPDVWKKLAQ CEEECCCCCCCHHHHHHHCC >Mature Secondary Structure SVIDQNASRFAARAKTGVVSLFSSADDTARFTAHWHRPSAVLVRATGEIDAVNANHLAE CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCEECCCHHHHHH YATRYLDGHRTLVLDLQGLRFFGTDGLVALDRVRRHCKVQGIDWTVIPGDAVTKLLTLSG HHHHHHCCCEEEEEEECCCEEECCCCHHHHHHHHHHCEECCCEEEEECHHHHHHHHHCCC DMAAYPVNDAIPDVWKKLAQ CEEECCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA