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The map label for this gene is cmpB [H]

Identifier: 169629549

GI number: 169629549

Start: 2517558

End: 2518382

Strand: Direct

Name: cmpB [H]

Synonym: MAB_2463

Alternate gene names: 169629549

Gene position: 2517558-2518382 (Clockwise)

Preceding gene: 169629548

Following gene: 169629550

Centisome position: 49.68

GC content: 62.06

Gene sequence:

>825_bases
GTGAGCATCATCGAACGTGCACCCAGGGCTGTCCCTGTTGGTACGGTTGCGGCGCAAAAAGCTTTGTTGTTGAGCCGTAT
TTGGCCGCCGGCCCTGGCCATCGCGGCGACCGTCGCAGTGTGGTGGTTGGCCAGCTCGGTGCTCAGCCAGCCGTATTCCC
TATTGCGGCAGACCGCTCCGGACAAGGCATTCCGAGCCGCGATGGATCTGTTGAATCGCGGGGTATTGCTGCAGGACGCC
GGAATCAGTCTGTGGCGATTATTGATTGGGCTATGCCTGGCGGCCGTGATCGGCGTCCCGGCGGGACTGCTGCTCGGCGT
CAGTACCACCGCCGAGCGCGCGGCACGTCCGGTGATTCAGTTTCTGCGGATGATCTCACCGCTTTCCTGGACTCCGATCG
CGGTAGCGGTCTTCGGGATCGGTAATCAACCGGTCGTTTTTCTGATCGCCACAGCGGCGGTATGGCCCATTCTCCTCAAC
ACCACGGCGGGCGTGCACAGCATCGAGCCCGGCTATCTGCATGTGGCGCGGTCGTTTCACGCCACCAGGTCCGAGGTGCT
CACGGCGGTGATACTGCCGGCAATCCGTGGTCACATCCAGACCGGTATACGGGTAGCGCTGGGCGTCGCCTGGGTTGTCC
TCGTGCCTGCTGAAATGCTCGGTGTGCGATCAGGTTTGGGCTACCAGGTGCTCAATGCCCGAGATCAGCTTGCTTACGAT
CAAGTCGTGGCCGTCATCTTGGTGATCGGGATACTCGGATACGCCCTCGACATGGCGGCCAAACGGCTGTTGGCGTCGAG
GTTTCGCGTACCGAGTGCCGGGTAG

Upstream 100 bases:

>100_bases
TCGACGACACCTTCGTGCGCAGGGCGATTGCCGCGCATGGGGGACCGGAAGCCTTTGGTATTACGCCGCAATTCGCCCGA
ATAGAACAGGTGCAGGTCTT

Downstream 100 bases:

>100_bases
GCTCACACAAGTCGCCTTACCTGATACCGGAGGTGGTTCAGATGAACGTGCTTGCCCGCCGATTGATAATCGCCGGGGCC
GGAGTGCTGTTGCCGCTAGC

Product: putative sulfonate ABC transporter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSIIERAPRAVPVGTVAAQKALLLSRIWPPALAIAATVAVWWLASSVLSQPYSLLRQTAPDKAFRAAMDLLNRGVLLQDA
GISLWRLLIGLCLAAVIGVPAGLLLGVSTTAERAARPVIQFLRMISPLSWTPIAVAVFGIGNQPVVFLIATAAVWPILLN
TTAGVHSIEPGYLHVARSFHATRSEVLTAVILPAIRGHIQTGIRVALGVAWVVLVPAEMLGVRSGLGYQVLNARDQLAYD
QVVAVILVIGILGYALDMAAKRLLASRFRVPSAG

Sequences:

>Translated_274_residues
MSIIERAPRAVPVGTVAAQKALLLSRIWPPALAIAATVAVWWLASSVLSQPYSLLRQTAPDKAFRAAMDLLNRGVLLQDA
GISLWRLLIGLCLAAVIGVPAGLLLGVSTTAERAARPVIQFLRMISPLSWTPIAVAVFGIGNQPVVFLIATAAVWPILLN
TTAGVHSIEPGYLHVARSFHATRSEVLTAVILPAIRGHIQTGIRVALGVAWVVLVPAEMLGVRSGLGYQVLNARDQLAYD
QVVAVILVIGILGYALDMAAKRLLASRFRVPSAG
>Mature_273_residues
SIIERAPRAVPVGTVAAQKALLLSRIWPPALAIAATVAVWWLASSVLSQPYSLLRQTAPDKAFRAAMDLLNRGVLLQDAG
ISLWRLLIGLCLAAVIGVPAGLLLGVSTTAERAARPVIQFLRMISPLSWTPIAVAVFGIGNQPVVFLIATAAVWPILLNT
TAGVHSIEPGYLHVARSFHATRSEVLTAVILPAIRGHIQTGIRVALGVAWVVLVPAEMLGVRSGLGYQVLNARDQLAYDQ
VVAVILVIGILGYALDMAAKRLLASRFRVPSAG

Specific function: Part of the ABC transporter complex CmpABCD involved in bicarbonate transport. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=226, Percent_Identity=36.7256637168142, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1786564, Length=237, Percent_Identity=33.3333333333333, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR005889 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29074; Mature: 28943

Theoretical pI: Translated: 11.49; Mature: 11.49

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIIERAPRAVPVGTVAAQKALLLSRIWPPALAIAATVAVWWLASSVLSQPYSLLRQTAP
CCHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DKAFRAAMDLLNRGVLLQDAGISLWRLLIGLCLAAVIGVPAGLLLGVSTTAERAARPVIQ
HHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHH
FLRMISPLSWTPIAVAVFGIGNQPVVFLIATAAVWPILLNTTAGVHSIEPGYLHVARSFH
HHHHHCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ATRSEVLTAVILPAIRGHIQTGIRVALGVAWVVLVPAEMLGVRSGLGYQVLNARDQLAYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
QVVAVILVIGILGYALDMAAKRLLASRFRVPSAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SIIERAPRAVPVGTVAAQKALLLSRIWPPALAIAATVAVWWLASSVLSQPYSLLRQTAP
CHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DKAFRAAMDLLNRGVLLQDAGISLWRLLIGLCLAAVIGVPAGLLLGVSTTAERAARPVIQ
HHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHH
FLRMISPLSWTPIAVAVFGIGNQPVVFLIATAAVWPILLNTTAGVHSIEPGYLHVARSFH
HHHHHCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ATRSEVLTAVILPAIRGHIQTGIRVALGVAWVVLVPAEMLGVRSGLGYQVLNARDQLAYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
QVVAVILVIGILGYALDMAAKRLLASRFRVPSAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA