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The map label for this gene is ygaK [H]

Identifier: 169629542

GI number: 169629542

Start: 2511347

End: 2512846

Strand: Direct

Name: ygaK [H]

Synonym: MAB_2456

Alternate gene names: 169629542

Gene position: 2511347-2512846 (Clockwise)

Preceding gene: 169629538

Following gene: 169629545

Centisome position: 49.56

GC content: 64.73

Gene sequence:

>1500_bases
ATGGACCCGCAATCGCGTCCCGCGTTGATGACCAGGCGCACGGTGCTGTCCGCCGGAGCGATGTTGGCACTCGGCTCGAC
TTCGCTCATCGGATGCTCGCCGGTTCTTCCCAACGAAATACCGGCTGGTGTCCGGTGGGAAGACCTGCGCCGCAGCCTAT
CCGGAGCCTTGGTGGTGCGTGGTGACGCCGCCATGGACGAGTCCGGCCGGGCCTTCAATCCTCTCTTCGATGTGAATCAT
CCCGGTGCGGTGGCCTTCTGCGCGTCCGATCAGGATGTGGCACGGTGTGTGGAGTTCGCAACGAGCGCCCGTCTTCCGAT
AGCGGCGCGTGGTGGTGGGCACAGCTACGCCGCGTACTGCATTCCTAACGATGGGCTGGTGGTCGATCTCGCGCGCATGG
CGGCGGTGTCGGTTACCGGAACGCGGGCGGTGGTCGGAGCGGGAGCCCGGCTTATCGATGTCTATGCGGGTATTGCAGGG
GCGGGCCGCATGCTGGCCGGCGGTTCCTGCCCGACCGTCGGTATCGCCGGACTGACCCTGGGTGGCGGGGTGGGGGTTCT
CACCCGCAGGTTCGGCCTTACCTGTGACCAGCTGATCTCGGCCCGGGTGGTAACCGCCGACGGCAAGATCCGGGTGGTAT
CCGCGGACACCGAGTCCGACCTGTTCTGGGCGATACGCGGGGTAGGCGGCGGAAACTTTTGTATCGCAACGGAGCTGGCG
TTCGAAACGGCCGCATCCACCGACCTGACGGTGTTCACCCTCGACTACGCGGCGGGGGAGATGGCCCCCATCGTGCATCG
ATGGCTCACCTTCATGGCCGGGGCGCCGGACGAACTGTGGACAACTTTGCATGCGATCGGTGGCGCCATCCCACAATGCC
GGATCGTGGGATGTGTTGCACAGGGCGTCAATTCGCAGGACGTGATCGAGAGCCTGCGCGGCGGGATCGGCGTACGCGCC
GCCGACTCTTTCATTGCCGAGATGACCTTCCTCGACGCGATGAAATTCATGGGCGGATGTACCACGCTGACCGTGGCCCA
GTGTCACCCATCATGGACCGGCCCGGGATCGGGGCAGCTCAAGCGTGAGGCCTTCGTGGCGTCCTCGAGGATGGTTCCGC
ATCCCGATGTCGATACCGCCCGCATCGAGACGCTCCTGGCGGGCAAGCCCGGGCTCACGTTTATTTTCGACAGCCTGGGC
GGGGCGGTGCGCCGAATTTCCCCGGATGCCACAGCTTTTCCTCATCGACAGGCCGCCGCCTGTATTCAGATATACCACGG
CGTCGGTGCGGACCCCGCGGTGGCACACGAGCGCGTAAGCCAGGCACGGGACGGGCTCGGGGACATTTGTGGTCCTGCTG
CGTATGTGAACTACATCGACCCCGGTATGCCTGATTGGGCGACCGCGTACTACGGAGACAATCTGCCGCGTTTACGGGGA
ATCGCTGCTGCCTACGATCCGAAAGGGATTTTCCGGTTTGCGCAGGCGGTTCGGCCGTAA

Upstream 100 bases:

>100_bases
GTGCTATGTCGGCCACCGGATGAGGCGTCGAGTTGGCCGTCATTCCGTCAATCTACCGTTGCACGGCACACTCACCGGCT
GCAGGCGACAAGATGAGGCC

Downstream 100 bases:

>100_bases
CTGCGTCCGATCGCAGCGGTCAAAGTCCGGCGCCGGGGAGTCGGGTTCTCGAACAACTACCGTCCTACCTCGTGCTCAAG
GGCCTTGACAGGCCGACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MDPQSRPALMTRRTVLSAGAMLALGSTSLIGCSPVLPNEIPAGVRWEDLRRSLSGALVVRGDAAMDESGRAFNPLFDVNH
PGAVAFCASDQDVARCVEFATSARLPIAARGGGHSYAAYCIPNDGLVVDLARMAAVSVTGTRAVVGAGARLIDVYAGIAG
AGRMLAGGSCPTVGIAGLTLGGGVGVLTRRFGLTCDQLISARVVTADGKIRVVSADTESDLFWAIRGVGGGNFCIATELA
FETAASTDLTVFTLDYAAGEMAPIVHRWLTFMAGAPDELWTTLHAIGGAIPQCRIVGCVAQGVNSQDVIESLRGGIGVRA
ADSFIAEMTFLDAMKFMGGCTTLTVAQCHPSWTGPGSGQLKREAFVASSRMVPHPDVDTARIETLLAGKPGLTFIFDSLG
GAVRRISPDATAFPHRQAAACIQIYHGVGADPAVAHERVSQARDGLGDICGPAAYVNYIDPGMPDWATAYYGDNLPRLRG
IAAAYDPKGIFRFAQAVRP

Sequences:

>Translated_499_residues
MDPQSRPALMTRRTVLSAGAMLALGSTSLIGCSPVLPNEIPAGVRWEDLRRSLSGALVVRGDAAMDESGRAFNPLFDVNH
PGAVAFCASDQDVARCVEFATSARLPIAARGGGHSYAAYCIPNDGLVVDLARMAAVSVTGTRAVVGAGARLIDVYAGIAG
AGRMLAGGSCPTVGIAGLTLGGGVGVLTRRFGLTCDQLISARVVTADGKIRVVSADTESDLFWAIRGVGGGNFCIATELA
FETAASTDLTVFTLDYAAGEMAPIVHRWLTFMAGAPDELWTTLHAIGGAIPQCRIVGCVAQGVNSQDVIESLRGGIGVRA
ADSFIAEMTFLDAMKFMGGCTTLTVAQCHPSWTGPGSGQLKREAFVASSRMVPHPDVDTARIETLLAGKPGLTFIFDSLG
GAVRRISPDATAFPHRQAAACIQIYHGVGADPAVAHERVSQARDGLGDICGPAAYVNYIDPGMPDWATAYYGDNLPRLRG
IAAAYDPKGIFRFAQAVRP
>Mature_499_residues
MDPQSRPALMTRRTVLSAGAMLALGSTSLIGCSPVLPNEIPAGVRWEDLRRSLSGALVVRGDAAMDESGRAFNPLFDVNH
PGAVAFCASDQDVARCVEFATSARLPIAARGGGHSYAAYCIPNDGLVVDLARMAAVSVTGTRAVVGAGARLIDVYAGIAG
AGRMLAGGSCPTVGIAGLTLGGGVGVLTRRFGLTCDQLISARVVTADGKIRVVSADTESDLFWAIRGVGGGNFCIATELA
FETAASTDLTVFTLDYAAGEMAPIVHRWLTFMAGAPDELWTTLHAIGGAIPQCRIVGCVAQGVNSQDVIESLRGGIGVRA
ADSFIAEMTFLDAMKFMGGCTTLTVAQCHPSWTGPGSGQLKREAFVASSRMVPHPDVDTARIETLLAGKPGLTFIFDSLG
GAVRRISPDATAFPHRQAAACIQIYHGVGADPAVAHERVSQARDGLGDICGPAAYVNYIDPGMPDWATAYYGDNLPRLRG
IAAAYDPKGIFRFAQAVRP

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 51986; Mature: 51986

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00862 OX2_COVAL_FAD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPQSRPALMTRRTVLSAGAMLALGSTSLIGCSPVLPNEIPAGVRWEDLRRSLSGALVVR
CCCCCCCHHHHHHHHHHCCCEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHCCEEEEE
GDAAMDESGRAFNPLFDVNHPGAVAFCASDQDVARCVEFATSARLPIAARGGGHSYAAYC
CCCCCCCCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCEEEEE
IPNDGLVVDLARMAAVSVTGTRAVVGAGARLIDVYAGIAGAGRMLAGGSCPTVGIAGLTL
ECCCCEEEEHHHHHHEEECCCHHHHHCCHHHHHHHHCCCCCCCEECCCCCCCCEEEEEEE
GGGVGVLTRRFGLTCDQLISARVVTADGKIRVVSADTESDLFWAIRGVGGGNFCIATELA
CCCHHHHHHHHCCCHHHHHCEEEEECCCEEEEEECCCCCCEEEEEEECCCCCEEEEEEHH
FETAASTDLTVFTLDYAAGEMAPIVHRWLTFMAGAPDELWTTLHAIGGAIPQCRIVGCVA
HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHEEHHHH
QGVNSQDVIESLRGGIGVRAADSFIAEMTFLDAMKFMGGCTTLTVAQCHPSWTGPGSGQL
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCH
KREAFVASSRMVPHPDVDTARIETLLAGKPGLTFIFDSLGGAVRRISPDATAFPHRQAAA
HHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEHHHHHCCHHEECCCCCCCCCCHHHHH
CIQIYHGVGADPAVAHERVSQARDGLGDICGPAAYVNYIDPGMPDWATAYYGDNLPRLRG
HHHHHHCCCCCHHHHHHHHHHHHCCHHHHCCHHHHHHCCCCCCCCHHHHHCCCCCHHHHH
IAAAYDPKGIFRFAQAVRP
HHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MDPQSRPALMTRRTVLSAGAMLALGSTSLIGCSPVLPNEIPAGVRWEDLRRSLSGALVVR
CCCCCCCHHHHHHHHHHCCCEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHCCEEEEE
GDAAMDESGRAFNPLFDVNHPGAVAFCASDQDVARCVEFATSARLPIAARGGGHSYAAYC
CCCCCCCCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCEEEEE
IPNDGLVVDLARMAAVSVTGTRAVVGAGARLIDVYAGIAGAGRMLAGGSCPTVGIAGLTL
ECCCCEEEEHHHHHHEEECCCHHHHHCCHHHHHHHHCCCCCCCEECCCCCCCCEEEEEEE
GGGVGVLTRRFGLTCDQLISARVVTADGKIRVVSADTESDLFWAIRGVGGGNFCIATELA
CCCHHHHHHHHCCCHHHHHCEEEEECCCEEEEEECCCCCCEEEEEEECCCCCEEEEEEHH
FETAASTDLTVFTLDYAAGEMAPIVHRWLTFMAGAPDELWTTLHAIGGAIPQCRIVGCVA
HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHEEHHHH
QGVNSQDVIESLRGGIGVRAADSFIAEMTFLDAMKFMGGCTTLTVAQCHPSWTGPGSGQL
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCH
KREAFVASSRMVPHPDVDTARIETLLAGKPGLTFIFDSLGGAVRRISPDATAFPHRQAAA
HHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEHHHHHCCHHEECCCCCCCCCCHHHHH
CIQIYHGVGADPAVAHERVSQARDGLGDICGPAAYVNYIDPGMPDWATAYYGDNLPRLRG
HHHHHHCCCCCHHHHHHHHHHHHCCHHHHCCHHHHHHCCCCCCCCHHHHHCCCCCHHHHH
IAAAYDPKGIFRFAQAVRP
HHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]