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The map label for this gene is glxA [H]

Identifier: 169629531

GI number: 169629531

Start: 2501983

End: 2502936

Strand: Direct

Name: glxA [H]

Synonym: MAB_2445

Alternate gene names: 169629531

Gene position: 2501983-2502936 (Clockwise)

Preceding gene: 169629529

Following gene: 169629534

Centisome position: 49.38

GC content: 65.72

Gene sequence:

>954_bases
ATGGGCACCAAGACGGTGGCAGCGCTGGCGCTCGACGGCGTGATCACCTACGACTTGGCGTGCGCCGTGCAGATGTTCCG
CAGGGGGCCGGGACGTACCGGCCAGCCCGACGGTTTCGATCTGGTGACTTGTGGCCATCGGCCTGGAAGTGTCTGGACGC
CAGATGGTTTCCATCTCGATGTGGAACATGGCGTCGACACGCTCGAGGCTGCGGATATCGTCGTCGTGCCCGCACGTGCC
CCACATGACCACCCGCCTCCGGATGACGTGTTGAACGCGTTGCGGGGCGCGCATCAGCGTGGAGCCGTGGTGCTCAGCAT
CTGTCTGGGTGCGTTTGTCCTGGCTGCCGCAGGCCTGTTGGACGGACGTCCCGCCACGACGCATTGGGAGTACTGCGACG
ATATGCGCAGGTTGTATCCGCGGGTCGAGCTGCGGCCCGACGCGTTGTACGTCGATGACGGCGACATCCTGACCTCGGCG
GGATTGTCGGCGGGTATGGACCTGTGCCTGCATGTGGTGCGGCGTGAACTCGGTGCGGCGGCGGCATCCGATTTGGCTCG
CTGGAACGTCATGGCGCCACATCGCGATGGCGGCCAGGCTCAGTTCATCCCGCCCGTCAGGACCGCCCTCGGTGCCGGCG
GTCTGGGGCCGACATTGAGCTGGGCGGCCGAGCGTCTCGCCGAGATCGATGATGTGTCGGCACTGGCGAGGCATGCGCAT
CTGAGTCTTCGCACCTTCAACCGCCGATTCGCGGAAGAAGTGGGCACCACGCCCAAGCGGTGGCTCGACGTGCAGCGGGC
GACGCGAGCTCGTGAACTGCTTGAGAATACCGATATGACCGTGGAATCCATTGCCGCGCAATGTGGATTTGGCAGTGTCG
CCGCCATGAGGACGCATCTGCGCCGGGTCACGGCGACCACACCGAGCGCCTACCGCCGGGCGTTTCGGCGGTAG

Upstream 100 bases:

>100_bases
TCCAATTCGACGGTTGCCATGACTTCAGTGAAGATGGGCGCTTCGAATCCGACCAGTGGCGTGAATGCCATAGATACTCC
GATTCATGCCATAGTGAGGT

Downstream 100 bases:

>100_bases
GCGCTCGCGATCAGCGCGCGACGTGCGGCATCAAGGCGTTGGGCGGAATGGCGCCGAACCGGCCGGCCTGGTAGTCCTCG
ACCGCCTGGATCAGCTCGGC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MGTKTVAALALDGVITYDLACAVQMFRRGPGRTGQPDGFDLVTCGHRPGSVWTPDGFHLDVEHGVDTLEAADIVVVPARA
PHDHPPPDDVLNALRGAHQRGAVVLSICLGAFVLAAAGLLDGRPATTHWEYCDDMRRLYPRVELRPDALYVDDGDILTSA
GLSAGMDLCLHVVRRELGAAAASDLARWNVMAPHRDGGQAQFIPPVRTALGAGGLGPTLSWAAERLAEIDDVSALARHAH
LSLRTFNRRFAEEVGTTPKRWLDVQRATRARELLENTDMTVESIAAQCGFGSVAAMRTHLRRVTATTPSAYRRAFRR

Sequences:

>Translated_317_residues
MGTKTVAALALDGVITYDLACAVQMFRRGPGRTGQPDGFDLVTCGHRPGSVWTPDGFHLDVEHGVDTLEAADIVVVPARA
PHDHPPPDDVLNALRGAHQRGAVVLSICLGAFVLAAAGLLDGRPATTHWEYCDDMRRLYPRVELRPDALYVDDGDILTSA
GLSAGMDLCLHVVRRELGAAAASDLARWNVMAPHRDGGQAQFIPPVRTALGAGGLGPTLSWAAERLAEIDDVSALARHAH
LSLRTFNRRFAEEVGTTPKRWLDVQRATRARELLENTDMTVESIAAQCGFGSVAAMRTHLRRVTATTPSAYRRAFRR
>Mature_316_residues
GTKTVAALALDGVITYDLACAVQMFRRGPGRTGQPDGFDLVTCGHRPGSVWTPDGFHLDVEHGVDTLEAADIVVVPARAP
HDHPPPDDVLNALRGAHQRGAVVLSICLGAFVLAAAGLLDGRPATTHWEYCDDMRRLYPRVELRPDALYVDDGDILTSAG
LSAGMDLCLHVVRRELGAAAASDLARWNVMAPHRDGGQAQFIPPVRTALGAGGLGPTLSWAAERLAEIDDVSALARHAHL
SLRTFNRRFAEEVGTTPKRWLDVQRATRARELLENTDMTVESIAAQCGFGSVAAMRTHLRRVTATTPSAYRRAFRR

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34293; Mature: 34162

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTKTVAALALDGVITYDLACAVQMFRRGPGRTGQPDGFDLVTCGHRPGSVWTPDGFHLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEE
VEHGVDTLEAADIVVVPARAPHDHPPPDDVLNALRGAHQRGAVVLSICLGAFVLAAAGLL
HHHCCCHHCCCCEEEECCCCCCCCCCHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHC
DGRPATTHWEYCDDMRRLYPRVELRPDALYVDDGDILTSAGLSAGMDLCLHVVRRELGAA
CCCCCCCHHHHHHHHHHHCCCCEECCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHH
AASDLARWNVMAPHRDGGQAQFIPPVRTALGAGGLGPTLSWAAERLAEIDDVSALARHAH
HHHHHHHCCCCCCCCCCCCCEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LSLRTFNRRFAEEVGTTPKRWLDVQRATRARELLENTDMTVESIAAQCGFGSVAAMRTHL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
RRVTATTPSAYRRAFRR
HHHHCCCCHHHHHHHCC
>Mature Secondary Structure 
GTKTVAALALDGVITYDLACAVQMFRRGPGRTGQPDGFDLVTCGHRPGSVWTPDGFHLD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEE
VEHGVDTLEAADIVVVPARAPHDHPPPDDVLNALRGAHQRGAVVLSICLGAFVLAAAGLL
HHHCCCHHCCCCEEEECCCCCCCCCCHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHC
DGRPATTHWEYCDDMRRLYPRVELRPDALYVDDGDILTSAGLSAGMDLCLHVVRRELGAA
CCCCCCCHHHHHHHHHHHCCCCEECCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHH
AASDLARWNVMAPHRDGGQAQFIPPVRTALGAGGLGPTLSWAAERLAEIDDVSALARHAH
HHHHHHHCCCCCCCCCCCCCEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LSLRTFNRRFAEEVGTTPKRWLDVQRATRARELLENTDMTVESIAAQCGFGSVAAMRTHL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
RRVTATTPSAYRRAFRR
HHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]