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The map label for this gene is ureD [H]

Identifier: 169629514

GI number: 169629514

Start: 2484835

End: 2485482

Strand: Direct

Name: ureD [H]

Synonym: MAB_2428

Alternate gene names: 169629514

Gene position: 2484835-2485482 (Clockwise)

Preceding gene: 169629513

Following gene: 169629519

Centisome position: 49.04

GC content: 66.67

Gene sequence:

>648_bases
ATGCGCACTGACGTCCACATCATCGCGGAGAAGGGCCGGCTCCCTCGGCTGCGCTGCACGGGCAGTCTGCAGGGGCGAAT
CACCGACACCGATACCGTCCATCTCGTCGGCGTGGCCGCTAGTCCACTGGGGGGTGACGAGATCTCGGTGCGAATCGAGG
TCGGTGAAGGCGCGATGCTGCGCGTGCGGTCGGTGGCGGCAGCTGTGGCGCTGCCCGGCCGCGAAAACCTAAGGTCGTTC
GCGACATGGGACTGTGCGGTGGCCGGGCTGCTGGATCTGGACCCGGCGCCAACCATTGTGGCGGCCAACGCTTCTCACCA
TTCTCATGTCACCGTTCGGGGATCAGTCGGTGTCGGCCTGCGGCTGCGGGAGCGGGTGCAGATCGGCAGGGCGGGGGAGT
CATCGGGATTCTGGAGCGGCCAACTCGACGCCGACATCGGCGCTACGCCGTTGCTGCGGCATCGCGTTGAACTCGGTACC
GGATCGGTGACCGACGACGAACTGGGCCGGCCCCTGGCGTTGATCAGTGAATTGCGCTATCCAGCAACGGATTCCATTGA
ACAGCTCCCGACAGGCGGCACACTGCTGGGTCTGGCCGGAGACGCCACCCTGCTCACCTGGCAGGGGCAGCGTCTACCGC
CCGACTGA

Upstream 100 bases:

>100_bases
GGCCGGCCGACGGCGATGATCTCGTTGACCGAGGACCCCGCGGCTTCCGAGGTGTTGGCCTGGGTGCGTGCGCATCTCAC
CGAGGCGCACCAAACGGACC

Downstream 100 bases:

>100_bases
CGACATCCGTCTAGCTTGCTGCCTTTTCCTTGTCGGGCTGCGTGGTCGGCTCCTCGTCGCCGTTCTTTTCCGCGACGAGC
TCCTCGAGTTGATCCAGACG

Product: putative urease accessory protein (UreH)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MRTDVHIIAEKGRLPRLRCTGSLQGRITDTDTVHLVGVAASPLGGDEISVRIEVGEGAMLRVRSVAAAVALPGRENLRSF
ATWDCAVAGLLDLDPAPTIVAANASHHSHVTVRGSVGVGLRLRERVQIGRAGESSGFWSGQLDADIGATPLLRHRVELGT
GSVTDDELGRPLALISELRYPATDSIEQLPTGGTLLGLAGDATLLTWQGQRLPPD

Sequences:

>Translated_215_residues
MRTDVHIIAEKGRLPRLRCTGSLQGRITDTDTVHLVGVAASPLGGDEISVRIEVGEGAMLRVRSVAAAVALPGRENLRSF
ATWDCAVAGLLDLDPAPTIVAANASHHSHVTVRGSVGVGLRLRERVQIGRAGESSGFWSGQLDADIGATPLLRHRVELGT
GSVTDDELGRPLALISELRYPATDSIEQLPTGGTLLGLAGDATLLTWQGQRLPPD
>Mature_215_residues
MRTDVHIIAEKGRLPRLRCTGSLQGRITDTDTVHLVGVAASPLGGDEISVRIEVGEGAMLRVRSVAAAVALPGRENLRSF
ATWDCAVAGLLDLDPAPTIVAANASHHSHVTVRGSVGVGLRLRERVQIGRAGESSGFWSGQLDADIGATPLLRHRVELGT
GSVTDDELGRPLALISELRYPATDSIEQLPTGGTLLGLAGDATLLTWQGQRLPPD

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 22643; Mature: 22643

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTDVHIIAEKGRLPRLRCTGSLQGRITDTDTVHLVGVAASPLGGDEISVRIEVGEGAML
CCCCEEEEECCCCCCEEEECCCCCEEEECCCEEEEEEEEECCCCCCEEEEEEEECCCCEE
RVRSVAAAVALPGRENLRSFATWDCAVAGLLDLDPAPTIVAANASHHSHVTVRGSVGVGL
EHHHHHHHEECCCHHHHHHHHHHHHHEEEEECCCCCCEEEEECCCCCCEEEEEECCCCCE
RLRERVQIGRAGESSGFWSGQLDADIGATPLLRHRVELGTGSVTDDELGRPLALISELRY
EEEEHEEECCCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCCCCHHHHCCHHHHHHHCCC
PATDSIEQLPTGGTLLGLAGDATLLTWQGQRLPPD
CCCCCHHHCCCCCEEEEECCCEEEEEEECCCCCCC
>Mature Secondary Structure
MRTDVHIIAEKGRLPRLRCTGSLQGRITDTDTVHLVGVAASPLGGDEISVRIEVGEGAML
CCCCEEEEECCCCCCEEEECCCCCEEEECCCEEEEEEEEECCCCCCEEEEEEEECCCCEE
RVRSVAAAVALPGRENLRSFATWDCAVAGLLDLDPAPTIVAANASHHSHVTVRGSVGVGL
EHHHHHHHEECCCHHHHHHHHHHHHHEEEEECCCCCCEEEEECCCCCCEEEEEECCCCCE
RLRERVQIGRAGESSGFWSGQLDADIGATPLLRHRVELGTGSVTDDELGRPLALISELRY
EEEEHEEECCCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCCCCHHHHCCHHHHHHHCCC
PATDSIEQLPTGGTLLGLAGDATLLTWQGQRLPPD
CCCCCHHHCCCCCEEEEECCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA