| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169629489
Identifier: 169629489
GI number: 169629489
Start: 2458874
End: 2459347
Strand: Direct
Name: 169629489
Synonym: MAB_2403
Alternate gene names: NA
Gene position: 2458874-2459347 (Clockwise)
Preceding gene: 169629488
Following gene: 169629490
Centisome position: 48.53
GC content: 64.14
Gene sequence:
>474_bases ATGGTGACCGATAACGACAAGGACGACACGTCAGGCGAGGTCACCGCGGAGACGACCTCGGTGTTCCGCGCCGATTTCGC TACCGAGCTTGAGGCGCCCGCCCAGGCCGGTGCCGACGTGTCTGGTGTCGAAGGATTGCCCGCCGGTTCGGCACTGTTGG TGGTCAAGCGCGGTCCCAACGCCGGGTCACGGTTTCTGCTCGATCAGGCCACCACGTCGGCCGGACGGCACCCCGATAGC GACATCTTCCTCGATGACGTCACGGTGAGCCGTCGTCACGCCGAATTCCGGCTTGACAGTGCCGAATTCCAGGTCGTCGA TGTGGGCAGCTTGAACGGCACCTACGTCAACCGCGAGCCAGTCGATTCGGCCGTCCTCGCCAATGGTGACGAGGTGCAGA TCGGAAAGTTTCGTCTGGTCTTCCTGACCGGGCCGAAGTCGGCCGGTGACGATTCCGCCTCGGGTGGCCAGTGA
Upstream 100 bases:
>100_bases CGCGAAGGGCATGAGGGCAGATGAGGGTCGCGACGAGCATCAGGCTCAGCAAGATCCGCACTGACAATCGAATCCTCCCA GGGGCGAGGAAGAAGGAGCG
Downstream 100 bases:
>100_bases CAGCTCCCGACCGGCCGGCTCTCACCGGAATGTCGATCGGGTCGGTACTCGACCTGTTGCGTCCGGAGTTTCCGGACGTC ACGATCTCGAAGATTCGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MVTDNDKDDTSGEVTAETTSVFRADFATELEAPAQAGADVSGVEGLPAGSALLVVKRGPNAGSRFLLDQATTSAGRHPDS DIFLDDVTVSRRHAEFRLDSAEFQVVDVGSLNGTYVNREPVDSAVLANGDEVQIGKFRLVFLTGPKSAGDDSASGGQ
Sequences:
>Translated_157_residues MVTDNDKDDTSGEVTAETTSVFRADFATELEAPAQAGADVSGVEGLPAGSALLVVKRGPNAGSRFLLDQATTSAGRHPDS DIFLDDVTVSRRHAEFRLDSAEFQVVDVGSLNGTYVNREPVDSAVLANGDEVQIGKFRLVFLTGPKSAGDDSASGGQ >Mature_157_residues MVTDNDKDDTSGEVTAETTSVFRADFATELEAPAQAGADVSGVEGLPAGSALLVVKRGPNAGSRFLLDQATTSAGRHPDS DIFLDDVTVSRRHAEFRLDSAEFQVVDVGSLNGTYVNREPVDSAVLANGDEVQIGKFRLVFLTGPKSAGDDSASGGQ
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FHA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000253 - InterPro: IPR008984 [H]
Pfam domain/function: PF00498 FHA [H]
EC number: NA
Molecular weight: Translated: 16388; Mature: 16388
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTDNDKDDTSGEVTAETTSVFRADFATELEAPAQAGADVSGVEGLPAGSALLVVKRGPN CCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCEEEEEEECCC AGSRFLLDQATTSAGRHPDSDIFLDDVTVSRRHAEFRLDSAEFQVVDVGSLNGTYVNREP CCCEEEEECCCCCCCCCCCCCEEEECEEECCCCCEEEECCCCEEEEEECCCCCEEECCCC VDSAVLANGDEVQIGKFRLVFLTGPKSAGDDSASGGQ CCCEEECCCCEEEECEEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MVTDNDKDDTSGEVTAETTSVFRADFATELEAPAQAGADVSGVEGLPAGSALLVVKRGPN CCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCEEEEEEECCC AGSRFLLDQATTSAGRHPDSDIFLDDVTVSRRHAEFRLDSAEFQVVDVGSLNGTYVNREP CCCEEEEECCCCCCCCCCCCCEEEECEEECCCCCEEEECCCCEEEEEECCCCCEEECCCC VDSAVLANGDEVQIGKFRLVFLTGPKSAGDDSASGGQ CCCEEECCCCEEEECEEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]