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The map label for this gene is fccA [H]

Identifier: 169629475

GI number: 169629475

Start: 2444362

End: 2445825

Strand: Direct

Name: fccA [H]

Synonym: MAB_2389

Alternate gene names: 169629475

Gene position: 2444362-2445825 (Clockwise)

Preceding gene: 169629474

Following gene: 169629476

Centisome position: 48.24

GC content: 63.32

Gene sequence:

>1464_bases
ATGAGTGCAGCGATTCCGGAAACCGTAGCGGTCCAAGACATCACCGAATGGTCCGACGAGGTCGACGTACTGGTCATCGG
CTTTGGGATGGGCGGCGGATGCGCCGCTGTCTCGGCCGCCGAGGCGGGCGCGCAGGTTTTGGCGCTCGAACGTGCCGCCT
CCGCGGGCGGCACCACCGCGATGGCGGGTGGGCACTTTTACCTCGGCGGCGGCACCGCTGTTCAGCAAGCCACTGGGCAT
GCGGACAGCGCCGACGAGATGTACAAGTACCTGATGGCGGTGTCTCCCGATCCGGACCCAGAGAAGATCCGCCTGTACTG
CGACGGTAGCGTCGAACATTTCAATTGGCTTGAGGCACTGGGCTTTCAATTCGAACGCAGCTTCTATCCGGAGAAGGCCG
TCATTCAGCCCAATACCGAAGGACTGATGTTCACCGGGAACGAGCTGGTGTGGCCCTACCGTGACGAAGCCATCCCGGCG
CCCCGGGGGCACAAGGTGCCCAAGCCCGGCGACACCGGCGGTGCGGGCATGGTCGTGGAACTACTCGCCCAACGTGCCGC
CGAGCTCGGTATACCGATCCGATACGAGACCGGCGCGACCGCGCTCATTCTCGACGAGGGGGGAGCGGTGGTGGGTGTGA
CATGGAAACACTTCACCGAAACCGGTGCGATACGCGCCAAATCGGTGATCATCGCGGCCGGAGGATTTGTGATGAACCCC
GCCATGGTGGCCGAATACACCCCCAAGCTCGCCGAGAAGCCGTTCGTGCTGGGCAGCACCTACGACGACGGGCTGGGCAT
CAGGCTCGGGGTGTCCGCGGGGGGCGCGACCCGCAACATGAATCAAATTTTCGTGACAGCTCCCGTGTATCCGCCGTCGG
GACTGCTGACCGGGATCATCGTGAACAAGAACGGGGAGCGGTTCGTCTCCGAGGATTCCTACCATTCCCGGACCTCTGGA
TTCGTGATGGATCAGGTGGATAGTGCCGCGTATCTGATTGTCGACTCCGAGCACATGGACCGGCCGACACTGCCACTGAC
TCCCTTCATTGATGGTTGGGAGACCGTCGCGGAAATGGAAGCAGCCCTGGGTATCCCGGCCGGAAACCTGGACAAGACGC
TGCAACGCTACAACGAGTACGCCGCCAAGGGTGAGGATCCAGACTTCCACAAACACCCGAAATACCTTGCCGCGCAGGGG
ACTGGTCCCTGGGGCGCATTCGATCTCACCCTCGGCAAAGCGATGTACGCCGGTTTCACACTCGGTGGCCTGCGGACCGA
CGCCGACGGTCGGGTGCTCACCGAATCCGGAGAGGCGATTCCGGGCCTGTATGCCGCGGGTGCCAGCGCGTCGAACATTG
CTCAGGACGGTAAGGGCTACAGCAGTGGAACCAGGCTCGGCGAAGCCTCGTTCTTCGGCCGGCGGGCGGGTTCACACGCG
TCAGTGCGGGTATCGGTCGCCTAG

Upstream 100 bases:

>100_bases
CCTATCTGTCGGCACCGGCGGCCGCCCTTCCGTACATGGAACTGGTCTTCGTCCCGCCCGAGATCCGGGCGTTCTACGAC
TACATCAAGAATGAGCAGGC

Downstream 100 bases:

>100_bases
ACGGAGCGCCTGCGCTATGTGAGGCCGGTCACAAAAGTGCATCAAATGCCCGCTCGTATGGGTAGCCGGTGGGCCCTGGT
GTGCCCGTCGCCTAGGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Flavocytochrome c; Flavocytochrome c3; Fcc3 [H]

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MSAAIPETVAVQDITEWSDEVDVLVIGFGMGGGCAAVSAAEAGAQVLALERAASAGGTTAMAGGHFYLGGGTAVQQATGH
ADSADEMYKYLMAVSPDPDPEKIRLYCDGSVEHFNWLEALGFQFERSFYPEKAVIQPNTEGLMFTGNELVWPYRDEAIPA
PRGHKVPKPGDTGGAGMVVELLAQRAAELGIPIRYETGATALILDEGGAVVGVTWKHFTETGAIRAKSVIIAAGGFVMNP
AMVAEYTPKLAEKPFVLGSTYDDGLGIRLGVSAGGATRNMNQIFVTAPVYPPSGLLTGIIVNKNGERFVSEDSYHSRTSG
FVMDQVDSAAYLIVDSEHMDRPTLPLTPFIDGWETVAEMEAALGIPAGNLDKTLQRYNEYAAKGEDPDFHKHPKYLAAQG
TGPWGAFDLTLGKAMYAGFTLGGLRTDADGRVLTESGEAIPGLYAAGASASNIAQDGKGYSSGTRLGEASFFGRRAGSHA
SVRVSVA

Sequences:

>Translated_487_residues
MSAAIPETVAVQDITEWSDEVDVLVIGFGMGGGCAAVSAAEAGAQVLALERAASAGGTTAMAGGHFYLGGGTAVQQATGH
ADSADEMYKYLMAVSPDPDPEKIRLYCDGSVEHFNWLEALGFQFERSFYPEKAVIQPNTEGLMFTGNELVWPYRDEAIPA
PRGHKVPKPGDTGGAGMVVELLAQRAAELGIPIRYETGATALILDEGGAVVGVTWKHFTETGAIRAKSVIIAAGGFVMNP
AMVAEYTPKLAEKPFVLGSTYDDGLGIRLGVSAGGATRNMNQIFVTAPVYPPSGLLTGIIVNKNGERFVSEDSYHSRTSG
FVMDQVDSAAYLIVDSEHMDRPTLPLTPFIDGWETVAEMEAALGIPAGNLDKTLQRYNEYAAKGEDPDFHKHPKYLAAQG
TGPWGAFDLTLGKAMYAGFTLGGLRTDADGRVLTESGEAIPGLYAAGASASNIAQDGKGYSSGTRLGEASFFGRRAGSHA
SVRVSVA
>Mature_486_residues
SAAIPETVAVQDITEWSDEVDVLVIGFGMGGGCAAVSAAEAGAQVLALERAASAGGTTAMAGGHFYLGGGTAVQQATGHA
DSADEMYKYLMAVSPDPDPEKIRLYCDGSVEHFNWLEALGFQFERSFYPEKAVIQPNTEGLMFTGNELVWPYRDEAIPAP
RGHKVPKPGDTGGAGMVVELLAQRAAELGIPIRYETGATALILDEGGAVVGVTWKHFTETGAIRAKSVIIAAGGFVMNPA
MVAEYTPKLAEKPFVLGSTYDDGLGIRLGVSAGGATRNMNQIFVTAPVYPPSGLLTGIIVNKNGERFVSEDSYHSRTSGF
VMDQVDSAAYLIVDSEHMDRPTLPLTPFIDGWETVAEMEAALGIPAGNLDKTLQRYNEYAAKGEDPDFHKHPKYLAAQGT
GPWGAFDLTLGKAMYAGFTLGGLRTDADGRVLTESGEAIPGLYAAGASASNIAQDGKGYSSGTRLGEASFFGRRAGSHAS
VRVSVA

Specific function: Catalyzes fumarate reduction using artificial electron donors such as methyl viologen. The physiological reductant is unknown, but evidence indicates that flavocytochrome c participates in electron transfer from formate to fumarate and possibly also to tr

COG id: COG1053

COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI71986328, Length=493, Percent_Identity=24.3407707910751, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR013027
- InterPro:   IPR010960
- InterPro:   IPR011031
- InterPro:   IPR012286
- InterPro:   IPR007087 [H]

Pfam domain/function: PF00890 FAD_binding_2 [H]

EC number: =1.3.99.1 [H]

Molecular weight: Translated: 51248; Mature: 51117

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAIPETVAVQDITEWSDEVDVLVIGFGMGGGCAAVSAAEAGAQVLALERAASAGGTTA
CCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCEEEEEHHHCCCCCCEE
MAGGHFYLGGGTAVQQATGHADSADEMYKYLMAVSPDPDPEKIRLYCDGSVEHFNWLEAL
ECCCEEEECCCHHHHHHCCCCCCHHHHHHHHHEECCCCCCCEEEEEECCCCCHHHHHHHH
GFQFERSFYPEKAVIQPNTEGLMFTGNELVWPYRDEAIPAPRGHKVPKPGDTGGAGMVVE
HHHHHHCCCCCCEEECCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
LLAQRAAELGIPIRYETGATALILDEGGAVVGVTWKHFTETGAIRAKSVIIAAGGFVMNP
HHHHHHHHCCCEEEECCCCEEEEEECCCEEEEEEHHHHCCCCCEEEEEEEEEECCEEECC
AMVAEYTPKLAEKPFVLGSTYDDGLGIRLGVSAGGATRNMNQIFVTAPVYPPSGLLTGII
HHHHHCCHHHHCCCEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEE
VNKNGERFVSEDSYHSRTSGFVMDQVDSAAYLIVDSEHMDRPTLPLTPFIDGWETVAEME
ECCCCCEECCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH
AALGIPAGNLDKTLQRYNEYAAKGEDPDFHKHPKYLAAQGTGPWGAFDLTLGKAMYAGFT
HHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEHHHHHHHHCCEE
LGGLRTDADGRVLTESGEAIPGLYAAGASASNIAQDGKGYSSGTRLGEASFFGRRAGSHA
ECCEEECCCCCEEECCCCCCCCEEECCCCHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCC
SVRVSVA
EEEEEEC
>Mature Secondary Structure 
SAAIPETVAVQDITEWSDEVDVLVIGFGMGGGCAAVSAAEAGAQVLALERAASAGGTTA
CCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCEEEEEHHHCCCCCCEE
MAGGHFYLGGGTAVQQATGHADSADEMYKYLMAVSPDPDPEKIRLYCDGSVEHFNWLEAL
ECCCEEEECCCHHHHHHCCCCCCHHHHHHHHHEECCCCCCCEEEEEECCCCCHHHHHHHH
GFQFERSFYPEKAVIQPNTEGLMFTGNELVWPYRDEAIPAPRGHKVPKPGDTGGAGMVVE
HHHHHHCCCCCCEEECCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
LLAQRAAELGIPIRYETGATALILDEGGAVVGVTWKHFTETGAIRAKSVIIAAGGFVMNP
HHHHHHHHCCCEEEECCCCEEEEEECCCEEEEEEHHHHCCCCCEEEEEEEEEECCEEECC
AMVAEYTPKLAEKPFVLGSTYDDGLGIRLGVSAGGATRNMNQIFVTAPVYPPSGLLTGII
HHHHHCCHHHHCCCEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEE
VNKNGERFVSEDSYHSRTSGFVMDQVDSAAYLIVDSEHMDRPTLPLTPFIDGWETVAEME
ECCCCCEECCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH
AALGIPAGNLDKTLQRYNEYAAKGEDPDFHKHPKYLAAQGTGPWGAFDLTLGKAMYAGFT
HHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEHHHHHHHHCCEE
LGGLRTDADGRVLTESGEAIPGLYAAGASASNIAQDGKGYSSGTRLGEASFFGRRAGSHA
ECCEEECCCCCEEECCCCCCCCEEECCCCHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCC
SVRVSVA
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1333793 [H]