| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is aphE [H]
Identifier: 169629471
GI number: 169629471
Start: 2441989
End: 2442756
Strand: Direct
Name: aphE [H]
Synonym: MAB_2385
Alternate gene names: 169629471
Gene position: 2441989-2442756 (Clockwise)
Preceding gene: 169629470
Following gene: 169629472
Centisome position: 48.19
GC content: 67.71
Gene sequence:
>768_bases TTGATCGATCTGTCGGCCTGGGAGCCGATCGTGACGGGGGAGTCCGGTGCCTGCGTGTACCGCTCGCCCGACGGTTCTCG CTATGCGAAAAAAGGCGGTGCCGATCTTGCGGGCGAGCGGGACCGCATCGAATGGCTTAGTGCTCAACGTATTCCGGGCC CATCGGTGCTCGAATGGGCGACCACGTCGGACGGTCCGCTGCTGATCACCTCGGCGGTACCGGGCGTACCCGCCGACCAG CTCGACTCCGAGGATTTGGGCAGGGCATGGTCTGGGATCGCCGCAGCGGTGCGGGACCTGCACGCGCTGCCGACAGCGGG CTGTCCGTTTTCGCGAGGGCTGGCCGCCATGGCAACGTTGGCCCGCGACGTCGTGGCCCGCGACGCCGTGAACCCGGATT TTCTGACCGACGAAGACCGGGAGAGGCCGGCGACCGAGCTGCTATGCCGTGTTGTGGCCGAACTGCCTCGGCGCCTGGCT CAGGAGCCCGACGACCTGGTGGTGTGCCATGGGGACTTGTGCCTGCCGAATATCGTCATCGCGCCCGGAGACTTCTCAGT GGCGGGCTTCATCGATCTCGGCCGGCTCGGGTTGGCCGACCGGCACGCCGATCTGGCCTTGCTCTTTGCCAATGCCCGGG AGACCTGGCCCGGGGACGGCTGGGTCACGGCCGCCGCCCACGAGCGGTTCCTGAACCGGTACGGAGCGTCTGCCGACCCC GAACGGTTGGCGTTCTACCTGCGGTTGGATCCGCTGACCTGGGGATAG
Upstream 100 bases:
>100_bases TCATCGCCAACTATGTGGCCCATGAGGTCGACAACCCGAAGGCCATGGCGGCGCGCACGATCGACGTCGCACATCGGCTC GACGAGGCGTGGACGGGCGT
Downstream 100 bases:
>100_bases TGATTAAGCATTGACTTATATAAGCAGTCCCTTTTAATATCGGTGACGTGCACGCCTTCGACATACTCGGAGACCCGGTG CGCCGGCGCATCCTGGAGCT
Product: streptomycin phosphotransferase
Products: NA
Alternate protein names: Streptomycin 3''-phosphotransferase; Streptomycin 6-kinase; Streptomycin 6-phosphotransferase [H]
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MIDLSAWEPIVTGESGACVYRSPDGSRYAKKGGADLAGERDRIEWLSAQRIPGPSVLEWATTSDGPLLITSAVPGVPADQ LDSEDLGRAWSGIAAAVRDLHALPTAGCPFSRGLAAMATLARDVVARDAVNPDFLTDEDRERPATELLCRVVAELPRRLA QEPDDLVVCHGDLCLPNIVIAPGDFSVAGFIDLGRLGLADRHADLALLFANARETWPGDGWVTAAAHERFLNRYGASADP ERLAFYLRLDPLTWG
Sequences:
>Translated_255_residues MIDLSAWEPIVTGESGACVYRSPDGSRYAKKGGADLAGERDRIEWLSAQRIPGPSVLEWATTSDGPLLITSAVPGVPADQ LDSEDLGRAWSGIAAAVRDLHALPTAGCPFSRGLAAMATLARDVVARDAVNPDFLTDEDRERPATELLCRVVAELPRRLA QEPDDLVVCHGDLCLPNIVIAPGDFSVAGFIDLGRLGLADRHADLALLFANARETWPGDGWVTAAAHERFLNRYGASADP ERLAFYLRLDPLTWG >Mature_255_residues MIDLSAWEPIVTGESGACVYRSPDGSRYAKKGGADLAGERDRIEWLSAQRIPGPSVLEWATTSDGPLLITSAVPGVPADQ LDSEDLGRAWSGIAAAVRDLHALPTAGCPFSRGLAAMATLARDVVARDAVNPDFLTDEDRERPATELLCRVVAELPRRLA QEPDDLVVCHGDLCLPNIVIAPGDFSVAGFIDLGRLGLADRHADLALLFANARETWPGDGWVTAAAHERFLNRYGASADP ERLAFYLRLDPLTWG
Specific function: The aminoglycoside phosphotransferases achieve inactivation of their antibiotic substrates by phosphorylation [H]
COG id: COG3231
COG function: function code J; Aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aminoglycoside phosphotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 [H]
Pfam domain/function: PF01636 APH [H]
EC number: =2.7.1.87 [H]
Molecular weight: Translated: 27424; Mature: 27424
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLSAWEPIVTGESGACVYRSPDGSRYAKKGGADLAGERDRIEWLSAQRIPGPSVLEWA CCCCCCCCCEEECCCCEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEE TTSDGPLLITSAVPGVPADQLDSEDLGRAWSGIAAAVRDLHALPTAGCPFSRGLAAMATL ECCCCCEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ARDVVARDAVNPDFLTDEDRERPATELLCRVVAELPRRLAQEPDDLVVCHGDLCLPNIVI HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEE APGDFSVAGFIDLGRLGLADRHADLALLFANARETWPGDGWVTAAAHERFLNRYGASADP ECCCCCEEHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHCCCCCH ERLAFYLRLDPLTWG HHEEEEEEECCCCCC >Mature Secondary Structure MIDLSAWEPIVTGESGACVYRSPDGSRYAKKGGADLAGERDRIEWLSAQRIPGPSVLEWA CCCCCCCCCEEECCCCEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEE TTSDGPLLITSAVPGVPADQLDSEDLGRAWSGIAAAVRDLHALPTAGCPFSRGLAAMATL ECCCCCEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ARDVVARDAVNPDFLTDEDRERPATELLCRVVAELPRRLAQEPDDLVVCHGDLCLPNIVI HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEE APGDFSVAGFIDLGRLGLADRHADLALLFANARETWPGDGWVTAAAHERFLNRYGASADP ECCCCCEEHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHCCCCCH ERLAFYLRLDPLTWG HHEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2167474; 2844130; 2821169 [H]