| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169629430
Identifier: 169629430
GI number: 169629430
Start: 2399441
End: 2400226
Strand: Direct
Name: 169629430
Synonym: MAB_2344
Alternate gene names: NA
Gene position: 2399441-2400226 (Clockwise)
Preceding gene: 169629429
Following gene: 169629431
Centisome position: 47.35
GC content: 62.72
Gene sequence:
>786_bases ATGGACGGTGAGCCGGACCCGACATTGTCGGGCCCCGGTCCGGGGGGAGAGACGCCGGACGACCCGAACGCGGTATGGCG CCGCCCCGGTGCGGAGGGGCCATTTGCGCCCGCCGCGCCCGCCACGCCCACCGCCGAAGGCCAGCAGCCTCCCGCGTCGC AGGGGGTCGTCGGCCGGCTGACCACCTGGGTCCGGTCCTGGTGGCACGACCTTGAGTTTGTCCAGATGTGGCATGTCGTG GCCGTGGCGGCGATTCTTGCCACCGCGGGTTTTGGCGGTCTGGACACCGTAGATAAAACGCCGAAGACCTTCGACGTGGG ACAGCCGTTCGACAACAATCAATTCGTTATCGTGGTGAAGAAGGCCAGAGTCGTGCCAGAAGTCGTTGGCGACGGCCGCG TGCTGGCAAAGGCGAAGCCGGGGCGCGTCTATCTGGGTGTGATCGCCGAGGTCACGAACAAGGGCTCGATGCCCGGCAGT GTCTCGGCCATGTTCTCGTTACCCGAGGTGCCCGATGTCTGGGATCCGGAAATGATGAGCAAGGGAAAACCAACAAGTTT CCGACTCCATGACCAGACACCGCTGTACGTATTGCAGCCTGGGCTGACCGAGGACGCAGTGGTGATTTGGAACATTCCTG CGACTGCGGTGAAGCCGGGGGCAAACGTCGAAGTAAAAGTGCCCTTTCGTAAATACGCAGCGGCAGGCTATGTGATCTAC GGAGCCAGCTGGCGTGACACCGACGATTACGCGACAGTTCTTGTCCCTGTAGAGGCTCCACAATGA
Upstream 100 bases:
>100_bases CACCGCCCCAGAGCGGGTAGCGGAGCAGCGTGAACTGGTGCTGGCCCGTCTGAACGTGCTTCGCGGTCAGAACGGCCGCC ATCCAGGCTAATATCCAGCC
Downstream 100 bases:
>100_bases ACCCGATGAAATGGTCTAGGCCGCGTATTGAATCAGCACCATTGCGGATAGCGGTGATCATCTGCGTGGTGATCGCGACG CTTGCGGCTTCCGTGTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MDGEPDPTLSGPGPGGETPDDPNAVWRRPGAEGPFAPAAPATPTAEGQQPPASQGVVGRLTTWVRSWWHDLEFVQMWHVV AVAAILATAGFGGLDTVDKTPKTFDVGQPFDNNQFVIVVKKARVVPEVVGDGRVLAKAKPGRVYLGVIAEVTNKGSMPGS VSAMFSLPEVPDVWDPEMMSKGKPTSFRLHDQTPLYVLQPGLTEDAVVIWNIPATAVKPGANVEVKVPFRKYAAAGYVIY GASWRDTDDYATVLVPVEAPQ
Sequences:
>Translated_261_residues MDGEPDPTLSGPGPGGETPDDPNAVWRRPGAEGPFAPAAPATPTAEGQQPPASQGVVGRLTTWVRSWWHDLEFVQMWHVV AVAAILATAGFGGLDTVDKTPKTFDVGQPFDNNQFVIVVKKARVVPEVVGDGRVLAKAKPGRVYLGVIAEVTNKGSMPGS VSAMFSLPEVPDVWDPEMMSKGKPTSFRLHDQTPLYVLQPGLTEDAVVIWNIPATAVKPGANVEVKVPFRKYAAAGYVIY GASWRDTDDYATVLVPVEAPQ >Mature_261_residues MDGEPDPTLSGPGPGGETPDDPNAVWRRPGAEGPFAPAAPATPTAEGQQPPASQGVVGRLTTWVRSWWHDLEFVQMWHVV AVAAILATAGFGGLDTVDKTPKTFDVGQPFDNNQFVIVVKKARVVPEVVGDGRVLAKAKPGRVYLGVIAEVTNKGSMPGS VSAMFSLPEVPDVWDPEMMSKGKPTSFRLHDQTPLYVLQPGLTEDAVVIWNIPATAVKPGANVEVKVPFRKYAAAGYVIY GASWRDTDDYATVLVPVEAPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27896; Mature: 27896
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGEPDPTLSGPGPGGETPDDPNAVWRRPGAEGPFAPAAPATPTAEGQQPPASQGVVGRL CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH TTWVRSWWHDLEFVQMWHVVAVAAILATAGFGGLDTVDKTPKTFDVGQPFDNNQFVIVVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEE KARVVPEVVGDGRVLAKAKPGRVYLGVIAEVTNKGSMPGSVSAMFSLPEVPDVWDPEMMS CCCCCHHHHCCCEEEEECCCCEEEEEEEEEHHCCCCCCCCCCEEEECCCCCCCCCHHHHH KGKPTSFRLHDQTPLYVLQPGLTEDAVVIWNIPATAVKPGANVEVKVPFRKYAAAGYVIY CCCCCEEEECCCCCEEEECCCCCCCEEEEEECCHHHCCCCCCEEEECCHHHHCCCCEEEE GASWRDTDDYATVLVPVEAPQ CCCCCCCCCEEEEEEEECCCC >Mature Secondary Structure MDGEPDPTLSGPGPGGETPDDPNAVWRRPGAEGPFAPAAPATPTAEGQQPPASQGVVGRL CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH TTWVRSWWHDLEFVQMWHVVAVAAILATAGFGGLDTVDKTPKTFDVGQPFDNNQFVIVVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEE KARVVPEVVGDGRVLAKAKPGRVYLGVIAEVTNKGSMPGSVSAMFSLPEVPDVWDPEMMS CCCCCHHHHCCCEEEEECCCCEEEEEEEEEHHCCCCCCCCCCEEEECCCCCCCCCHHHHH KGKPTSFRLHDQTPLYVLQPGLTEDAVVIWNIPATAVKPGANVEVKVPFRKYAAAGYVIY CCCCCEEEECCCCCEEEECCCCCCCEEEEEECCHHHCCCCCCEEEECCHHHHCCCCEEEE GASWRDTDDYATVLVPVEAPQ CCCCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA