| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629140
Identifier: 169629140
GI number: 169629140
Start: 2053828
End: 2054871
Strand: Direct
Name: 169629140
Synonym: MAB_2053
Alternate gene names: NA
Gene position: 2053828-2054871 (Clockwise)
Preceding gene: 169629139
Following gene: 169629141
Centisome position: 40.53
GC content: 69.54
Gene sequence:
>1044_bases GTGAGCACGTACGGGGTCTCGGTGCTCGGCGCGGACTTGGCCACCCTTGTCGAGACCGCCGAGGCTACCGACCTCGCCGG CTTCGACGCCGCCTGGGCCTCGGAGTTCTACTCGCGCTCCGGCTCGATCTCGATGGCCGCGATGGCCGCGCGCACAAAGC GCTGCCGCATCGGGTCGTCGATCCTGTATGGCGTCGGGCGCAGCCCGCTCGTGCTCGCCACCGAGGCGCGTGACCTCGAC GAGCTTTCAGGCGGGCGCGTCGTGCTCGGGCTCGGCAACGGCACACGCCGCATGATGAGCGACTGGCACGGCGTGGAGGA CACCTCCGCTCCCGCTCTGCGCATGGAGGAGCTGGTCCCGCTCGTGCGTCGGATCTGGAACCTGCACGAGGGCCCCGTGC GCCATGAGGGTCGCTTCTATCGGATGAATCTCGTCCCGACCGGCGACGTCGCGCCGCCGCAGCGGGCCATCCCGATCATC ACCGCGGGCGTGCGTCCGCGGATGTGCGAGGTGGCAGGGCGCGTCGCCGACGGGTTGGCCGGTCATCCGCTATTCACCAC GACCTACGTCGAGGAGGTCGCCCGCCCAGCCGTCGTGCGCGGTGCGGAGCGGGCCGGACGCGATCCCGCCGACATTGAGA TCGTCTCGATGGTCATCTGCGCGGTGCACGACGACCCACAGATCGCACGCCGTGAGGCCGCGCAGCAGATCGCGTTCTAC TCCTCGGTGAAGACCTACGAACACGTTCTCGATGTGAGCGGCTTCGCCAGGCAGGGGGCGGCGATTCGCGACGCGTTCGC GCGGCGTGACCTGCCGGCCATGTTCGCAGCCGTCACCGACGACATGATCGACGCGATGGCGGTGGCCGGCACCGCCGCCG AGGTCCGAGAAGGGCTGCGCCGCTACGAGGGCGTGCTGGACCACATCGTTCTCTACTCACCCTCGATCGGCCTCGCGCCC GAGCGCATCGCCGAGAACCTAGGCAGCCTCATTCGCGATTGTGCACCGGCCTTCGCCGGCGGGAAAGGTGACCAGAGTGG CTGA
Upstream 100 bases:
>100_bases GCGTGGCCCCCGATGAAGTTGCGATCGGCGCAAGAGTGCGCGCAGTGTTCGAGCGGGTGAACGAGGACCTTGGGCTGGTC CGATTCAGGCCGGCGGCGTC
Downstream 100 bases:
>100_bases CGCATCGCTCATCGGGACGCAACTCGGGAGCACCACATTTCCCGTCGACCGGTCCAAAGTGCGCGAGTTCGCGCTGTCCC TCGACGACCACGACCCGATC
Product: luciferase-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MSTYGVSVLGADLATLVETAEATDLAGFDAAWASEFYSRSGSISMAAMAARTKRCRIGSSILYGVGRSPLVLATEARDLD ELSGGRVVLGLGNGTRRMMSDWHGVEDTSAPALRMEELVPLVRRIWNLHEGPVRHEGRFYRMNLVPTGDVAPPQRAIPII TAGVRPRMCEVAGRVADGLAGHPLFTTTYVEEVARPAVVRGAERAGRDPADIEIVSMVICAVHDDPQIARREAAQQIAFY SSVKTYEHVLDVSGFARQGAAIRDAFARRDLPAMFAAVTDDMIDAMAVAGTAAEVREGLRRYEGVLDHIVLYSPSIGLAP ERIAENLGSLIRDCAPAFAGGKGDQSG
Sequences:
>Translated_347_residues MSTYGVSVLGADLATLVETAEATDLAGFDAAWASEFYSRSGSISMAAMAARTKRCRIGSSILYGVGRSPLVLATEARDLD ELSGGRVVLGLGNGTRRMMSDWHGVEDTSAPALRMEELVPLVRRIWNLHEGPVRHEGRFYRMNLVPTGDVAPPQRAIPII TAGVRPRMCEVAGRVADGLAGHPLFTTTYVEEVARPAVVRGAERAGRDPADIEIVSMVICAVHDDPQIARREAAQQIAFY SSVKTYEHVLDVSGFARQGAAIRDAFARRDLPAMFAAVTDDMIDAMAVAGTAAEVREGLRRYEGVLDHIVLYSPSIGLAP ERIAENLGSLIRDCAPAFAGGKGDQSG >Mature_346_residues STYGVSVLGADLATLVETAEATDLAGFDAAWASEFYSRSGSISMAAMAARTKRCRIGSSILYGVGRSPLVLATEARDLDE LSGGRVVLGLGNGTRRMMSDWHGVEDTSAPALRMEELVPLVRRIWNLHEGPVRHEGRFYRMNLVPTGDVAPPQRAIPIIT AGVRPRMCEVAGRVADGLAGHPLFTTTYVEEVARPAVVRGAERAGRDPADIEIVSMVICAVHDDPQIARREAAQQIAFYS SVKTYEHVLDVSGFARQGAAIRDAFARRDLPAMFAAVTDDMIDAMAVAGTAAEVREGLRRYEGVLDHIVLYSPSIGLAPE RIAENLGSLIRDCAPAFAGGKGDQSG
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019919 - InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 37196; Mature: 37065
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTYGVSVLGADLATLVETAEATDLAGFDAAWASEFYSRSGSISMAAMAARTKRCRIGSS CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCH ILYGVGRSPLVLATEARDLDELSGGRVVLGLGNGTRRMMSDWHGVEDTSAPALRMEELVP HHHCCCCCCEEEEECCCCHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHH LVRRIWNLHEGPVRHEGRFYRMNLVPTGDVAPPQRAIPIITAGVRPRMCEVAGRVADGLA HHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCC GHPLFTTTYVEEVARPAVVRGAERAGRDPADIEIVSMVICAVHDDPQIARREAAQQIAFY CCCCHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SSVKTYEHVLDVSGFARQGAAIRDAFARRDLPAMFAAVTDDMIDAMAVAGTAAEVREGLR HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RYEGVLDHIVLYSPSIGLAPERIAENLGSLIRDCAPAFAGGKGDQSG HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure STYGVSVLGADLATLVETAEATDLAGFDAAWASEFYSRSGSISMAAMAARTKRCRIGSS CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCH ILYGVGRSPLVLATEARDLDELSGGRVVLGLGNGTRRMMSDWHGVEDTSAPALRMEELVP HHHCCCCCCEEEEECCCCHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHH LVRRIWNLHEGPVRHEGRFYRMNLVPTGDVAPPQRAIPIITAGVRPRMCEVAGRVADGLA HHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCC GHPLFTTTYVEEVARPAVVRGAERAGRDPADIEIVSMVICAVHDDPQIARREAAQQIAFY CCCCHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SSVKTYEHVLDVSGFARQGAAIRDAFARRDLPAMFAAVTDDMIDAMAVAGTAAEVREGLR HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RYEGVLDHIVLYSPSIGLAPERIAENLGSLIRDCAPAFAGGKGDQSG HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]