Click here to switch to the map view.

The map label for this gene is fdxB [H]

Identifier: 169629136

GI number: 169629136

Start: 2050509

End: 2050829

Strand: Reverse

Name: fdxB [H]

Synonym: MAB_2049c

Alternate gene names: 169629136

Gene position: 2050829-2050509 (Counterclockwise)

Preceding gene: 169629148

Following gene: 169629135

Centisome position: 40.47

GC content: 63.24

Gene sequence:

>321_bases
ATGGCAGTCGTCACCTTCGTCTCTCATGACGGCGAGAAGTACGAAGCCCCCTTGGCCGAAGGGCAGTCCTTGATGCAGAT
TGCGGTCAATAACGCGGTGCCCGGCATCGACGGCGATTGCGGAGGGGAAGCCGCATGCGGAACATGCCACGTGATCGTCG
CTCCCGAGTGGTCGGACACGGTGGGACTCTGCGGCGCCAACGAAGAGGAGATGCTCGCGATGAACCCCGAGCGTCAGCGG
ACGTCGAGGCTGTCCTGCCAGATGGCCGCCTCCGAGGCATGGGATGGCTTGACGGTCGAGCTACCTGAGTTCCAGCTCTG
A

Upstream 100 bases:

>100_bases
GTGAGCTAAAAACACAACTCTTTGACTCCTGCGAGTCTAGCGACGCTGGTCACGCGCGACAACACTAAAAAGAGAAGTTC
CAGATTGAGGAGAGTTAATC

Downstream 100 bases:

>100_bases
AACAACGTCATGGATTTGGAGGAAACAATAATGAGTATTCCCGCGGCAGTGGCCGCCAAAGCCCAGTCTGCCGTGCCTCT
GGAGCTGCAAATCCGCGGCG

Product: ferredoxin

Products: NA

Alternate protein names: FdII [H]

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MAVVTFVSHDGEKYEAPLAEGQSLMQIAVNNAVPGIDGDCGGEAACGTCHVIVAPEWSDTVGLCGANEEEMLAMNPERQR
TSRLSCQMAASEAWDGLTVELPEFQL

Sequences:

>Translated_106_residues
MAVVTFVSHDGEKYEAPLAEGQSLMQIAVNNAVPGIDGDCGGEAACGTCHVIVAPEWSDTVGLCGANEEEMLAMNPERQR
TSRLSCQMAASEAWDGLTVELPEFQL
>Mature_105_residues
AVVTFVSHDGEKYEAPLAEGQSLMQIAVNNAVPGIDGDCGGEAACGTCHVIVAPEWSDTVGLCGANEEEMLAMNPERQRT
SRLSCQMAASEAWDGLTVELPEFQL

Specific function: Unknown

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6325004, Length=101, Percent_Identity=36.6336633663366, Blast_Score=73, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 11258; Mature: 11127

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVVTFVSHDGEKYEAPLAEGQSLMQIAVNNAVPGIDGDCGGEAACGTCHVIVAPEWSDT
CEEEEEEECCCCCEECCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
VGLCGANEEEMLAMNPERQRTSRLSCQMAASEAWDGLTVELPEFQL
EEECCCCCCCEEEECCCHHHHHHHHEEECCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
AVVTFVSHDGEKYEAPLAEGQSLMQIAVNNAVPGIDGDCGGEAACGTCHVIVAPEWSDT
EEEEEEECCCCCEECCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
VGLCGANEEEMLAMNPERQRTSRLSCQMAASEAWDGLTVELPEFQL
EEECCCCCCCEEEECCCHHHHHHHHEEECCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7751304; 11259647 [H]