| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is yxlA [H]
Identifier: 169629112
GI number: 169629112
Start: 2023026
End: 2024516
Strand: Direct
Name: yxlA [H]
Synonym: MAB_2025
Alternate gene names: 169629112
Gene position: 2023026-2024516 (Clockwise)
Preceding gene: 169629111
Following gene: 169629113
Centisome position: 39.92
GC content: 59.09
Gene sequence:
>1491_bases ATGGATGAGATTCAAGCATGTTGCAGCGCAACGTCCTTAATCGCAAGCCGCGAATCGGTCGGGCGGGATCGCGTTGGGGC CATCGAGAGAGCCGGCATTGACTATCTACCAGAGGCGGCCAGGGGATCTTCGCCGAAGAATCTATTCGCGGTCTTCGTCG GAGGGAACCTTGCCTTCTCCACGATCATCTTTGGTTGGCTACCGATCGTCATGGGCCTGACCTTCTGGCAGGCCGTCTCA TCGAGCGTGACCGGCCTGCTGATCGGCCTGATGCTCACGGCACCCATGTCGCTGTTTGGGCCCCGTACCGGCACCAACAA CCCTGTCTCTTCGGGTGCTCATTTCGGTGTTCGGGGACGTCTTATTGGCTCATCGCTTACCCTGATGTTCGCTCTGGTGT ATGCGGCGATCGCCGTCTGGACATCGGGTGAAGCGCTCATTGCCGGTGCCAGCCGGCTTTTCGGCGCACCCCAGAATCAC GTAGCCTTCCTTCTCGGCTATGGAGTCATTGCGCTAGAGGTAATCCTGATTGCGCTATACGGTCACGCGACCATCGTGTG GGCTCAGAAGATCATTATCCCTTTGGCGGTCGTTGTTCTCGCTCTCGGCGTGCTCGCGTACGCGCCAAACTTCCATCCGA TGGGCAGCGCCCAACACGGGTATGCACTACAAGAATTTTGGCCGACTTGGCTTTTCGCCGTGACGGTCTCGGTCGGAGGG CCGCTCTCGTACGCACCGTCGGTAGGTGACTACACGCGGCGGATTTCACGTAGCAGATATTCCGACCGGCAAATTGCTGT CGCGGTTTCCGCGGGGATTTTTCTGGGTCTATTCTCGACCGCTACGTTTGGGGCGTTCACCGCGTCCACATTTTCCGCAC CGACCGCGTCGTATGTCGCGGACATGGTGGCTACTGCCCCCGGTTGGTACGTCGTTCCGTTGCTGATTCTGGCTGTGCTT GGCGGCTGTGGCCAGGGGGTGATCAGCATTTACTCAAGCGGTCTCGATCTTGAGTCGATTGTGCCGCGTCTCAACCGCAC TCAGACCACACTCATCGCCTCGGGGATCGCAGTCGTGCTTATGTATCTCGGTGTCGTCGTCACTGATGCGATTGACTCGG TCACGGGCATGACCGTGGTGCTCAATTCCTTTGCAGGATCCTGGGTTGCCATCAATATTTGCGGTTTCTTCAAAGCGAAC CGGGGCCAGTACGACCCAAAGGCGTTGCAACGCTTCGGGCAGGATGGCCGCGGCGGCTTGTACTGGTTCTCCCATGGATT CAATGTGCGCGCCGTCGTGCCGTTCATCGCGGGTTCCGGGCTTGGCCTGCTCACTGTGCAGAACGATCTATACCAGGCAC CGTTCGCCAATATTGCCGGGGGCATCGATGTCAGTCTGTTGTTGTCAGTTGTGGTTGGCGGCGGCTTGTACTGGCTCGCA CAAGTGTCGTGGCCGGCACCGCGCGTCGTGTCGTCCGGAAGTTCCGCGTAG
Upstream 100 bases:
>100_bases TTTCAACCCTGGAAGGGAATTTCCATGACTGTGCGCGAATTGCGCGGCATCGCCATCGGCGGCCAGCTGCGTAGTTGTCA AAGGTGCTGGGAGAAGTCCC
Downstream 100 bases:
>100_bases GGCCACGAATCATGTCCGGTTCCCATCGAGACGACGCCCCCGTCGTTACGAAACATTTTGCCCAAAGACCACCTGTTGTA GTGACACCCTCCGGCGTGAG
Product: purine/cytosine permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MDEIQACCSATSLIASRESVGRDRVGAIERAGIDYLPEAARGSSPKNLFAVFVGGNLAFSTIIFGWLPIVMGLTFWQAVS SSVTGLLIGLMLTAPMSLFGPRTGTNNPVSSGAHFGVRGRLIGSSLTLMFALVYAAIAVWTSGEALIAGASRLFGAPQNH VAFLLGYGVIALEVILIALYGHATIVWAQKIIIPLAVVVLALGVLAYAPNFHPMGSAQHGYALQEFWPTWLFAVTVSVGG PLSYAPSVGDYTRRISRSRYSDRQIAVAVSAGIFLGLFSTATFGAFTASTFSAPTASYVADMVATAPGWYVVPLLILAVL GGCGQGVISIYSSGLDLESIVPRLNRTQTTLIASGIAVVLMYLGVVVTDAIDSVTGMTVVLNSFAGSWVAINICGFFKAN RGQYDPKALQRFGQDGRGGLYWFSHGFNVRAVVPFIAGSGLGLLTVQNDLYQAPFANIAGGIDVSLLLSVVVGGGLYWLA QVSWPAPRVVSSGSSA
Sequences:
>Translated_496_residues MDEIQACCSATSLIASRESVGRDRVGAIERAGIDYLPEAARGSSPKNLFAVFVGGNLAFSTIIFGWLPIVMGLTFWQAVS SSVTGLLIGLMLTAPMSLFGPRTGTNNPVSSGAHFGVRGRLIGSSLTLMFALVYAAIAVWTSGEALIAGASRLFGAPQNH VAFLLGYGVIALEVILIALYGHATIVWAQKIIIPLAVVVLALGVLAYAPNFHPMGSAQHGYALQEFWPTWLFAVTVSVGG PLSYAPSVGDYTRRISRSRYSDRQIAVAVSAGIFLGLFSTATFGAFTASTFSAPTASYVADMVATAPGWYVVPLLILAVL GGCGQGVISIYSSGLDLESIVPRLNRTQTTLIASGIAVVLMYLGVVVTDAIDSVTGMTVVLNSFAGSWVAINICGFFKAN RGQYDPKALQRFGQDGRGGLYWFSHGFNVRAVVPFIAGSGLGLLTVQNDLYQAPFANIAGGIDVSLLLSVVVGGGLYWLA QVSWPAPRVVSSGSSA >Mature_496_residues MDEIQACCSATSLIASRESVGRDRVGAIERAGIDYLPEAARGSSPKNLFAVFVGGNLAFSTIIFGWLPIVMGLTFWQAVS SSVTGLLIGLMLTAPMSLFGPRTGTNNPVSSGAHFGVRGRLIGSSLTLMFALVYAAIAVWTSGEALIAGASRLFGAPQNH VAFLLGYGVIALEVILIALYGHATIVWAQKIIIPLAVVVLALGVLAYAPNFHPMGSAQHGYALQEFWPTWLFAVTVSVGG PLSYAPSVGDYTRRISRSRYSDRQIAVAVSAGIFLGLFSTATFGAFTASTFSAPTASYVADMVATAPGWYVVPLLILAVL GGCGQGVISIYSSGLDLESIVPRLNRTQTTLIASGIAVVLMYLGVVVTDAIDSVTGMTVVLNSFAGSWVAINICGFFKAN RGQYDPKALQRFGQDGRGGLYWFSHGFNVRAVVPFIAGSGLGLLTVQNDLYQAPFANIAGGIDVSLLLSVVVGGGLYWLA QVSWPAPRVVSSGSSA
Specific function: Unknown
COG id: COG1457
COG function: function code F; Purine-cytosine permease and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 51985; Mature: 51985
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: PS00265 PANCREATIC_HORMONE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEIQACCSATSLIASRESVGRDRVGAIERAGIDYLPEAARGSSPKNLFAVFVGGNLAFS CCHHHHHHHHHHHHHHHHHCCCHHHCHHHHCCCCCCCHHHCCCCCCCEEEEEECCCHHHH TIIFGWLPIVMGLTFWQAVSSSVTGLLIGLMLTAPMSLFGPRTGTNNPVSSGAHFGVRGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCEEEE LIGSSLTLMFALVYAAIAVWTSGEALIAGASRLFGAPQNHVAFLLGYGVIALEVILIALY EHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH GHATIVWAQKIIIPLAVVVLALGVLAYAPNFHPMGSAQHGYALQEFWPTWLFAVTVSVGG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC PLSYAPSVGDYTRRISRSRYSDRQIAVAVSAGIFLGLFSTATFGAFTASTFSAPTASYVA CCCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH DMVATAPGWYVVPLLILAVLGGCGQGVISIYSSGLDLESIVPRLNRTQTTLIASGIAVVL HHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHH MYLGVVVTDAIDSVTGMTVVLNSFAGSWVAINICGFFKANRGQYDPKALQRFGQDGRGGL HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHHHCCCCCCCCE YWFSHGFNVRAVVPFIAGSGLGLLTVQNDLYQAPFANIAGGIDVSLLLSVVVGGGLYWLA EEEECCCCEEEEEEECCCCCCEEEEECCHHHHCCHHHHCCCCHHHHHHHHHHCCCEEEEE QVSWPAPRVVSSGSSA EECCCCCHHCCCCCCC >Mature Secondary Structure MDEIQACCSATSLIASRESVGRDRVGAIERAGIDYLPEAARGSSPKNLFAVFVGGNLAFS CCHHHHHHHHHHHHHHHHHCCCHHHCHHHHCCCCCCCHHHCCCCCCCEEEEEECCCHHHH TIIFGWLPIVMGLTFWQAVSSSVTGLLIGLMLTAPMSLFGPRTGTNNPVSSGAHFGVRGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCEEEE LIGSSLTLMFALVYAAIAVWTSGEALIAGASRLFGAPQNHVAFLLGYGVIALEVILIALY EHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH GHATIVWAQKIIIPLAVVVLALGVLAYAPNFHPMGSAQHGYALQEFWPTWLFAVTVSVGG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC PLSYAPSVGDYTRRISRSRYSDRQIAVAVSAGIFLGLFSTATFGAFTASTFSAPTASYVA CCCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH DMVATAPGWYVVPLLILAVLGGCGQGVISIYSSGLDLESIVPRLNRTQTTLIASGIAVVL HHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHH MYLGVVVTDAIDSVTGMTVVLNSFAGSWVAINICGFFKANRGQYDPKALQRFGQDGRGGL HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHHHCCCCCCCCE YWFSHGFNVRAVVPFIAGSGLGLLTVQNDLYQAPFANIAGGIDVSLLLSVVVGGGLYWLA EEEECCCCEEEEEEECCCCCCEEEEECCHHHHCCHHHHCCCCHHHHHHHHHHCCCEEEEE QVSWPAPRVVSSGSSA EECCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]