Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is yxlA [H]

Identifier: 169629112

GI number: 169629112

Start: 2023026

End: 2024516

Strand: Direct

Name: yxlA [H]

Synonym: MAB_2025

Alternate gene names: 169629112

Gene position: 2023026-2024516 (Clockwise)

Preceding gene: 169629111

Following gene: 169629113

Centisome position: 39.92

GC content: 59.09

Gene sequence:

>1491_bases
ATGGATGAGATTCAAGCATGTTGCAGCGCAACGTCCTTAATCGCAAGCCGCGAATCGGTCGGGCGGGATCGCGTTGGGGC
CATCGAGAGAGCCGGCATTGACTATCTACCAGAGGCGGCCAGGGGATCTTCGCCGAAGAATCTATTCGCGGTCTTCGTCG
GAGGGAACCTTGCCTTCTCCACGATCATCTTTGGTTGGCTACCGATCGTCATGGGCCTGACCTTCTGGCAGGCCGTCTCA
TCGAGCGTGACCGGCCTGCTGATCGGCCTGATGCTCACGGCACCCATGTCGCTGTTTGGGCCCCGTACCGGCACCAACAA
CCCTGTCTCTTCGGGTGCTCATTTCGGTGTTCGGGGACGTCTTATTGGCTCATCGCTTACCCTGATGTTCGCTCTGGTGT
ATGCGGCGATCGCCGTCTGGACATCGGGTGAAGCGCTCATTGCCGGTGCCAGCCGGCTTTTCGGCGCACCCCAGAATCAC
GTAGCCTTCCTTCTCGGCTATGGAGTCATTGCGCTAGAGGTAATCCTGATTGCGCTATACGGTCACGCGACCATCGTGTG
GGCTCAGAAGATCATTATCCCTTTGGCGGTCGTTGTTCTCGCTCTCGGCGTGCTCGCGTACGCGCCAAACTTCCATCCGA
TGGGCAGCGCCCAACACGGGTATGCACTACAAGAATTTTGGCCGACTTGGCTTTTCGCCGTGACGGTCTCGGTCGGAGGG
CCGCTCTCGTACGCACCGTCGGTAGGTGACTACACGCGGCGGATTTCACGTAGCAGATATTCCGACCGGCAAATTGCTGT
CGCGGTTTCCGCGGGGATTTTTCTGGGTCTATTCTCGACCGCTACGTTTGGGGCGTTCACCGCGTCCACATTTTCCGCAC
CGACCGCGTCGTATGTCGCGGACATGGTGGCTACTGCCCCCGGTTGGTACGTCGTTCCGTTGCTGATTCTGGCTGTGCTT
GGCGGCTGTGGCCAGGGGGTGATCAGCATTTACTCAAGCGGTCTCGATCTTGAGTCGATTGTGCCGCGTCTCAACCGCAC
TCAGACCACACTCATCGCCTCGGGGATCGCAGTCGTGCTTATGTATCTCGGTGTCGTCGTCACTGATGCGATTGACTCGG
TCACGGGCATGACCGTGGTGCTCAATTCCTTTGCAGGATCCTGGGTTGCCATCAATATTTGCGGTTTCTTCAAAGCGAAC
CGGGGCCAGTACGACCCAAAGGCGTTGCAACGCTTCGGGCAGGATGGCCGCGGCGGCTTGTACTGGTTCTCCCATGGATT
CAATGTGCGCGCCGTCGTGCCGTTCATCGCGGGTTCCGGGCTTGGCCTGCTCACTGTGCAGAACGATCTATACCAGGCAC
CGTTCGCCAATATTGCCGGGGGCATCGATGTCAGTCTGTTGTTGTCAGTTGTGGTTGGCGGCGGCTTGTACTGGCTCGCA
CAAGTGTCGTGGCCGGCACCGCGCGTCGTGTCGTCCGGAAGTTCCGCGTAG

Upstream 100 bases:

>100_bases
TTTCAACCCTGGAAGGGAATTTCCATGACTGTGCGCGAATTGCGCGGCATCGCCATCGGCGGCCAGCTGCGTAGTTGTCA
AAGGTGCTGGGAGAAGTCCC

Downstream 100 bases:

>100_bases
GGCCACGAATCATGTCCGGTTCCCATCGAGACGACGCCCCCGTCGTTACGAAACATTTTGCCCAAAGACCACCTGTTGTA
GTGACACCCTCCGGCGTGAG

Product: purine/cytosine permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MDEIQACCSATSLIASRESVGRDRVGAIERAGIDYLPEAARGSSPKNLFAVFVGGNLAFSTIIFGWLPIVMGLTFWQAVS
SSVTGLLIGLMLTAPMSLFGPRTGTNNPVSSGAHFGVRGRLIGSSLTLMFALVYAAIAVWTSGEALIAGASRLFGAPQNH
VAFLLGYGVIALEVILIALYGHATIVWAQKIIIPLAVVVLALGVLAYAPNFHPMGSAQHGYALQEFWPTWLFAVTVSVGG
PLSYAPSVGDYTRRISRSRYSDRQIAVAVSAGIFLGLFSTATFGAFTASTFSAPTASYVADMVATAPGWYVVPLLILAVL
GGCGQGVISIYSSGLDLESIVPRLNRTQTTLIASGIAVVLMYLGVVVTDAIDSVTGMTVVLNSFAGSWVAINICGFFKAN
RGQYDPKALQRFGQDGRGGLYWFSHGFNVRAVVPFIAGSGLGLLTVQNDLYQAPFANIAGGIDVSLLLSVVVGGGLYWLA
QVSWPAPRVVSSGSSA

Sequences:

>Translated_496_residues
MDEIQACCSATSLIASRESVGRDRVGAIERAGIDYLPEAARGSSPKNLFAVFVGGNLAFSTIIFGWLPIVMGLTFWQAVS
SSVTGLLIGLMLTAPMSLFGPRTGTNNPVSSGAHFGVRGRLIGSSLTLMFALVYAAIAVWTSGEALIAGASRLFGAPQNH
VAFLLGYGVIALEVILIALYGHATIVWAQKIIIPLAVVVLALGVLAYAPNFHPMGSAQHGYALQEFWPTWLFAVTVSVGG
PLSYAPSVGDYTRRISRSRYSDRQIAVAVSAGIFLGLFSTATFGAFTASTFSAPTASYVADMVATAPGWYVVPLLILAVL
GGCGQGVISIYSSGLDLESIVPRLNRTQTTLIASGIAVVLMYLGVVVTDAIDSVTGMTVVLNSFAGSWVAINICGFFKAN
RGQYDPKALQRFGQDGRGGLYWFSHGFNVRAVVPFIAGSGLGLLTVQNDLYQAPFANIAGGIDVSLLLSVVVGGGLYWLA
QVSWPAPRVVSSGSSA
>Mature_496_residues
MDEIQACCSATSLIASRESVGRDRVGAIERAGIDYLPEAARGSSPKNLFAVFVGGNLAFSTIIFGWLPIVMGLTFWQAVS
SSVTGLLIGLMLTAPMSLFGPRTGTNNPVSSGAHFGVRGRLIGSSLTLMFALVYAAIAVWTSGEALIAGASRLFGAPQNH
VAFLLGYGVIALEVILIALYGHATIVWAQKIIIPLAVVVLALGVLAYAPNFHPMGSAQHGYALQEFWPTWLFAVTVSVGG
PLSYAPSVGDYTRRISRSRYSDRQIAVAVSAGIFLGLFSTATFGAFTASTFSAPTASYVADMVATAPGWYVVPLLILAVL
GGCGQGVISIYSSGLDLESIVPRLNRTQTTLIASGIAVVLMYLGVVVTDAIDSVTGMTVVLNSFAGSWVAINICGFFKAN
RGQYDPKALQRFGQDGRGGLYWFSHGFNVRAVVPFIAGSGLGLLTVQNDLYQAPFANIAGGIDVSLLLSVVVGGGLYWLA
QVSWPAPRVVSSGSSA

Specific function: Unknown

COG id: COG1457

COG function: function code F; Purine-cytosine permease and related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the purine-cytosine permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001248 [H]

Pfam domain/function: PF02133 Transp_cyt_pur [H]

EC number: NA

Molecular weight: Translated: 51985; Mature: 51985

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS00265 PANCREATIC_HORMONE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEIQACCSATSLIASRESVGRDRVGAIERAGIDYLPEAARGSSPKNLFAVFVGGNLAFS
CCHHHHHHHHHHHHHHHHHCCCHHHCHHHHCCCCCCCHHHCCCCCCCEEEEEECCCHHHH
TIIFGWLPIVMGLTFWQAVSSSVTGLLIGLMLTAPMSLFGPRTGTNNPVSSGAHFGVRGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCEEEE
LIGSSLTLMFALVYAAIAVWTSGEALIAGASRLFGAPQNHVAFLLGYGVIALEVILIALY
EHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
GHATIVWAQKIIIPLAVVVLALGVLAYAPNFHPMGSAQHGYALQEFWPTWLFAVTVSVGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PLSYAPSVGDYTRRISRSRYSDRQIAVAVSAGIFLGLFSTATFGAFTASTFSAPTASYVA
CCCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
DMVATAPGWYVVPLLILAVLGGCGQGVISIYSSGLDLESIVPRLNRTQTTLIASGIAVVL
HHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHH
MYLGVVVTDAIDSVTGMTVVLNSFAGSWVAINICGFFKANRGQYDPKALQRFGQDGRGGL
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHHHCCCCCCCCE
YWFSHGFNVRAVVPFIAGSGLGLLTVQNDLYQAPFANIAGGIDVSLLLSVVVGGGLYWLA
EEEECCCCEEEEEEECCCCCCEEEEECCHHHHCCHHHHCCCCHHHHHHHHHHCCCEEEEE
QVSWPAPRVVSSGSSA
EECCCCCHHCCCCCCC
>Mature Secondary Structure
MDEIQACCSATSLIASRESVGRDRVGAIERAGIDYLPEAARGSSPKNLFAVFVGGNLAFS
CCHHHHHHHHHHHHHHHHHCCCHHHCHHHHCCCCCCCHHHCCCCCCCEEEEEECCCHHHH
TIIFGWLPIVMGLTFWQAVSSSVTGLLIGLMLTAPMSLFGPRTGTNNPVSSGAHFGVRGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCEEEE
LIGSSLTLMFALVYAAIAVWTSGEALIAGASRLFGAPQNHVAFLLGYGVIALEVILIALY
EHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
GHATIVWAQKIIIPLAVVVLALGVLAYAPNFHPMGSAQHGYALQEFWPTWLFAVTVSVGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PLSYAPSVGDYTRRISRSRYSDRQIAVAVSAGIFLGLFSTATFGAFTASTFSAPTASYVA
CCCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
DMVATAPGWYVVPLLILAVLGGCGQGVISIYSSGLDLESIVPRLNRTQTTLIASGIAVVL
HHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHH
MYLGVVVTDAIDSVTGMTVVLNSFAGSWVAINICGFFKANRGQYDPKALQRFGQDGRGGL
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHHHCCCCCCCCE
YWFSHGFNVRAVVPFIAGSGLGLLTVQNDLYQAPFANIAGGIDVSLLLSVVVGGGLYWLA
EEEECCCCEEEEEEECCCCCCEEEEECCHHHHCCHHHHCCCCHHHHHHHHHHCCCEEEEE
QVSWPAPRVVSSGSSA
EECCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]