| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is ascG [C]
Identifier: 169629110
GI number: 169629110
Start: 2019656
End: 2020645
Strand: Reverse
Name: ascG [C]
Synonym: MAB_2023c
Alternate gene names: 169629110
Gene position: 2020645-2019656 (Counterclockwise)
Preceding gene: 169629127
Following gene: 169629108
Centisome position: 39.88
GC content: 62.53
Gene sequence:
>990_bases ATGGGGTTATCCAAGACGACGGTCGCCGATGCCCTCGGCGGCTCAGGCCGGGTTTCGGAGGCAACACGGGAGAAGACTCG CCTCGTCGCGGAGCGGATGGGCTATGTCTCAAACAGGGCGGCGCGTTTGTTGCGACGCAACGAGACCGGCGCCCTCGGCC TCTACATCCCCGGAGACGTGCGCAATCTATCGTTCTACATGGAGTTAGCATTCGGCGCCGCAGACGAATCGGCAGCTTTG GGCCTCGACCTGACGCTCATAGGCCGCCATCTAACCGGCGAAAACCGCAGCCGCCCACCGCAAGTAGACGGAATCATCGC CGTTGATCCCGTCCCGGGGGACGCCGCACTCGAGTCGTTGCTTACTTCAAACGTCCCCATCGTGACGGTGGGGCGCATCT TGGATAAAGATGTTTCCCACCATGCGGCCGAGATTGAAATCGACCACTACCGAATGGTCACCTTGTTACTCGATGCGATC CGGGCCGCCGGCGGCAAGCGTCCCGCCCTGGCGGCTCTCGACCAGGGGGCCGATTCATCGTATGTCTTCGATGTTTCGCG GGGATACCAGGAGTGGTGCGCAAAGGCCGGTGTCGTCCCGCTGGCGACGCGCCTTTCCGCGACACCCACCGATGTTGAAC TGGCGCAAGCCATCCGGGGAATAGTGGAGCACCAGGGAATCGATGCTCTGGTGGTCGGAGCGCAAGGCCTAGCCGCTCGA TCACTCCCCGTCTTACAGTCCCTGGGCCACGAAGTCGGGAGCAACTTTCATCTCGGGACCCTTGTCGGCGATCCTGCGAC AGAGCTCACCAACCCCGACATCCACGCCGTGGACCTGCGCCCCCGCGAGTTCGGACACCAAGCCGTGACATTCCTACACG ACATCATCGCAGGGCGGGCCTCTGCGAACGACCGGAGAACTCATCAAGCGCGGCTAAAAATAGCCGGCGTTTCATCTCCG CCCGCTATCCGCCGCGCGATGTCAGATTGA
Upstream 100 bases:
>100_bases GCACCGGTTCCAGTTCAGTCACCGGGTACTGATTGGCCTCAAACGCATACACTGAGGTATGCCTCGCGCTCCGGTAACCA TCGTGGACATAGCGCGGGAA
Downstream 100 bases:
>100_bases TCAGTGGCAGATAGACGGTGTCGAACAATTCCGCGAGCTTGCTCTCGCCAAAAGGCTTGCGGGTGAAGAACAGCTCGTGA CGCATGAGCGCGAGGATGCT
Product: LacI family transcriptional regulator
Products: NA
Alternate protein names: LacI Family Transcriptional Regulator; LacI-Family Transcriptional Regulator; Transcriptional Regulator; LacI Family Transcription Regulator; GalR/LacI Family Transcriptional Repressor; Regulatory Protein; Catabolite Control Protein A; LacI-Family Protein Transcriptional Regulator; Regulatory Protein LacI
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MGLSKTTVADALGGSGRVSEATREKTRLVAERMGYVSNRAARLLRRNETGALGLYIPGDVRNLSFYMELAFGAADESAAL GLDLTLIGRHLTGENRSRPPQVDGIIAVDPVPGDAALESLLTSNVPIVTVGRILDKDVSHHAAEIEIDHYRMVTLLLDAI RAAGGKRPALAALDQGADSSYVFDVSRGYQEWCAKAGVVPLATRLSATPTDVELAQAIRGIVEHQGIDALVVGAQGLAAR SLPVLQSLGHEVGSNFHLGTLVGDPATELTNPDIHAVDLRPREFGHQAVTFLHDIIAGRASANDRRTHQARLKIAGVSSP PAIRRAMSD
Sequences:
>Translated_329_residues MGLSKTTVADALGGSGRVSEATREKTRLVAERMGYVSNRAARLLRRNETGALGLYIPGDVRNLSFYMELAFGAADESAAL GLDLTLIGRHLTGENRSRPPQVDGIIAVDPVPGDAALESLLTSNVPIVTVGRILDKDVSHHAAEIEIDHYRMVTLLLDAI RAAGGKRPALAALDQGADSSYVFDVSRGYQEWCAKAGVVPLATRLSATPTDVELAQAIRGIVEHQGIDALVVGAQGLAAR SLPVLQSLGHEVGSNFHLGTLVGDPATELTNPDIHAVDLRPREFGHQAVTFLHDIIAGRASANDRRTHQARLKIAGVSSP PAIRRAMSD >Mature_328_residues GLSKTTVADALGGSGRVSEATREKTRLVAERMGYVSNRAARLLRRNETGALGLYIPGDVRNLSFYMELAFGAADESAALG LDLTLIGRHLTGENRSRPPQVDGIIAVDPVPGDAALESLLTSNVPIVTVGRILDKDVSHHAAEIEIDHYRMVTLLLDAIR AAGGKRPALAALDQGADSSYVFDVSRGYQEWCAKAGVVPLATRLSATPTDVELAQAIRGIVEHQGIDALVVGAQGLAARS LPVLQSLGHEVGSNFHLGTLVGDPATELTNPDIHAVDLRPREFGHQAVTFLHDIIAGRASANDRRTHQARLKIAGVSSPP AIRRAMSD
Specific function: Repressor Of The Asc Operon. The Cryptic Operon Is Activated By The Insertion Of Is186 Into The Ascg Gene. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34929; Mature: 34798
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSKTTVADALGGSGRVSEATREKTRLVAERMGYVSNRAARLLRRNETGALGLYIPGDV CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC RNLSFYMELAFGAADESAALGLDLTLIGRHLTGENRSRPPQVDGIIAVDPVPGDAALESL CHHEEEEEEECCCCCCCCCCCEEHEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHH LTSNVPIVTVGRILDKDVSHHAAEIEIDHYRMVTLLLDAIRAAGGKRPALAALDQGADSS HHCCCCEEEHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC YVFDVSRGYQEWCAKAGVVPLATRLSATPTDVELAQAIRGIVEHQGIDALVVGAQGLAAR EEEECCCCHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHH SLPVLQSLGHEVGSNFHLGTLVGDPATELTNPDIHAVDLRPREFGHQAVTFLHDIIAGRA CCHHHHHHHHHHCCCEEEEEEECCCHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCC SANDRRTHQARLKIAGVSSPPAIRRAMSD CCCCCHHHEEEEEEECCCCCHHHHHHHCC >Mature Secondary Structure GLSKTTVADALGGSGRVSEATREKTRLVAERMGYVSNRAARLLRRNETGALGLYIPGDV CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC RNLSFYMELAFGAADESAALGLDLTLIGRHLTGENRSRPPQVDGIIAVDPVPGDAALESL CHHEEEEEEECCCCCCCCCCCEEHEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHH LTSNVPIVTVGRILDKDVSHHAAEIEIDHYRMVTLLLDAIRAAGGKRPALAALDQGADSS HHCCCCEEEHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC YVFDVSRGYQEWCAKAGVVPLATRLSATPTDVELAQAIRGIVEHQGIDALVVGAQGLAAR EEEECCCCHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHH SLPVLQSLGHEVGSNFHLGTLVGDPATELTNPDIHAVDLRPREFGHQAVTFLHDIIAGRA CCHHHHHHHHHHCCCEEEEEEECCCHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCC SANDRRTHQARLKIAGVSSPPAIRRAMSD CCCCCHHHEEEEEEECCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA