| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629107
Identifier: 169629107
GI number: 169629107
Start: 2017418
End: 2018392
Strand: Reverse
Name: 169629107
Synonym: MAB_2020c
Alternate gene names: NA
Gene position: 2018392-2017418 (Counterclockwise)
Preceding gene: 169629108
Following gene: 169629102
Centisome position: 39.83
GC content: 62.87
Gene sequence:
>975_bases ATGGCACAAGATTTCGCGTTCCAGAAGGGGCTCGTCCCGCTCGGCGGCGGCGCACACGTTTTCCTCTCTGGTGACGAGGG TTTCGGACTGGCCAACGCGGGCCTGGTGGTCAGCGATGACGAATCACTGGTCGTAGATACGCTTTACGACGTGCGGCACG CACGGGAGATGCTTGATGAGTTCGGCCGGCACACGGCCACCGCCCCGGTGCGATATGTGTTCAACACCCACACTGACGGC GACCACTTCTTCGGCAATCAGGTATTCGCCGACGATGTCGAGATCATCACCACCGAAGCCGCGCGCGCACTCATGGTGCA GGAGCACGCGGACCTGACCGCCGAACTCCTTGGCGGCAGCTCCGACCCCGCATCGAACATGCACGTGTTGGCGCCACTCG CCAAGCCCTTCCACTTCAATGAAGTGCGCGTTCGCCCCGCGGACACCACGTTCTCCGGCGAGCGGGCGCTTCGGGTGGGC AAACTCGATGTAGAACTGCATGAGCTCGGTCCGGCCCACACCGTCGGCGACGCAGTAGCCTTCCTCCCCGAACACAGGGT GCTCTTCTCCGGCGACCTGCTGACTCGCGGAATCGTGAAGGTTGTCTGGTCGGGTTCTATCCCCAACTGGATCGTGGCGT TGGAGCGCATCCGCGCTTTCGGCGCCAAAATCGTTGTGCCCGGGCACGGTCCATTGCTCGTCGATGCCGAGGTCGACGCG GCCATCGATCGCGGCATCGCGTTCTGGTCGGACTTACACGAGCAAGCGAACCGACTCTATGACCAGGGCGTCCCCGCCCA GGACGCCACGGCTCTCATCGATATCGCAAAATACCCTGAAGCGATGGTCACTTTGCCGATCATCGTCACCGCGATCTACC ACGAACGCAACCCCGAGATCCCCTTCCAAAGCCTCACCCAGGCACTCGAATCCATCTCAGGTCAGCTCGCCAAGGCCGCC GCCGGCCCGAAGTAG
Upstream 100 bases:
>100_bases CTCAAGACACTGGGCATCGGCCCCGAGGGAGAGGGCGAGACGCGAGACATCCTCACCAGCGCTACGAACAAACTGCGCAC AGACGAAGGGCAGAACTGAC
Downstream 100 bases:
>100_bases AAGCGTGTCTGGCTAGCCTGCTGCGTTGGTACGCAACGGTGGACATTGCCCCTCGGCATCCGCGGTGAGTTCGTAGTGCC ACTTCTCGTTGGCAAAGACC
Product: bifunctional HHDD isomerase/cyclase/dehydrase
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Cyclase; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase; Beta-Lactamase-Like; Beta Lactamase; Polyketide Cyclase; Beta-Lactamase-Like Protein; Dehydrase; Beta Lactamase SoxH-Like Protein; Beta-Lactamase Family Protein; Metallo-Beta-Lactamase; Glyoxylase-Like Zinc-Dependent Hydrolase; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Domain Protein; Beta-Lactamase Class B; ActIV Cyclase; Bifunctional HHDD Isomerase/Cyclase/Dehydrase
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MAQDFAFQKGLVPLGGGAHVFLSGDEGFGLANAGLVVSDDESLVVDTLYDVRHAREMLDEFGRHTATAPVRYVFNTHTDG DHFFGNQVFADDVEIITTEAARALMVQEHADLTAELLGGSSDPASNMHVLAPLAKPFHFNEVRVRPADTTFSGERALRVG KLDVELHELGPAHTVGDAVAFLPEHRVLFSGDLLTRGIVKVVWSGSIPNWIVALERIRAFGAKIVVPGHGPLLVDAEVDA AIDRGIAFWSDLHEQANRLYDQGVPAQDATALIDIAKYPEAMVTLPIIVTAIYHERNPEIPFQSLTQALESISGQLAKAA AGPK
Sequences:
>Translated_324_residues MAQDFAFQKGLVPLGGGAHVFLSGDEGFGLANAGLVVSDDESLVVDTLYDVRHAREMLDEFGRHTATAPVRYVFNTHTDG DHFFGNQVFADDVEIITTEAARALMVQEHADLTAELLGGSSDPASNMHVLAPLAKPFHFNEVRVRPADTTFSGERALRVG KLDVELHELGPAHTVGDAVAFLPEHRVLFSGDLLTRGIVKVVWSGSIPNWIVALERIRAFGAKIVVPGHGPLLVDAEVDA AIDRGIAFWSDLHEQANRLYDQGVPAQDATALIDIAKYPEAMVTLPIIVTAIYHERNPEIPFQSLTQALESISGQLAKAA AGPK >Mature_323_residues AQDFAFQKGLVPLGGGAHVFLSGDEGFGLANAGLVVSDDESLVVDTLYDVRHAREMLDEFGRHTATAPVRYVFNTHTDGD HFFGNQVFADDVEIITTEAARALMVQEHADLTAELLGGSSDPASNMHVLAPLAKPFHFNEVRVRPADTTFSGERALRVGK LDVELHELGPAHTVGDAVAFLPEHRVLFSGDLLTRGIVKVVWSGSIPNWIVALERIRAFGAKIVVPGHGPLLVDAEVDAA IDRGIAFWSDLHEQANRLYDQGVPAQDATALIDIAKYPEAMVTLPIIVTAIYHERNPEIPFQSLTQALESISGQLAKAAA GPK
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34981; Mature: 34850
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQDFAFQKGLVPLGGGAHVFLSGDEGFGLANAGLVVSDDESLVVDTLYDVRHAREMLDE CCCCCCHHCCCEECCCCEEEEEECCCCCCEECCCEEEECCCCEEHHHHHHHHHHHHHHHH FGRHTATAPVRYVFNTHTDGDHFFGNQVFADDVEIITTEAARALMVQEHADLTAELLGGS HCCCCCCCCEEEEEECCCCCCCCCCCCEECCCHHEEEHHHHHHHHHHHHHHHHHHHHCCC SDPASNMHVLAPLAKPFHFNEVRVRPADTTFSGERALRVGKLDVELHELGPAHTVGDAVA CCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEHHHCCCCHHHHHHHH FLPEHRVLFSGDLLTRGIVKVVWSGSIPNWIVALERIRAFGAKIVVPGHGPLLVDAEVDA HCCCCCEEEECCHHHHHHHHHEECCCCCHHHHHHHHHHHCCCEEEECCCCCEEEECCHHH AIDRGIAFWSDLHEQANRLYDQGVPAQDATALIDIAKYPEAMVTLPIIVTAIYHERNPEI HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC PFQSLTQALESISGQLAKAAAGPK CHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AQDFAFQKGLVPLGGGAHVFLSGDEGFGLANAGLVVSDDESLVVDTLYDVRHAREMLDE CCCCCHHCCCEECCCCEEEEEECCCCCCEECCCEEEECCCCEEHHHHHHHHHHHHHHHH FGRHTATAPVRYVFNTHTDGDHFFGNQVFADDVEIITTEAARALMVQEHADLTAELLGGS HCCCCCCCCEEEEEECCCCCCCCCCCCEECCCHHEEEHHHHHHHHHHHHHHHHHHHHCCC SDPASNMHVLAPLAKPFHFNEVRVRPADTTFSGERALRVGKLDVELHELGPAHTVGDAVA CCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEHHHCCCCHHHHHHHH FLPEHRVLFSGDLLTRGIVKVVWSGSIPNWIVALERIRAFGAKIVVPGHGPLLVDAEVDA HCCCCCEEEECCHHHHHHHHHEECCCCCHHHHHHHHHHHCCCEEEECCCCCEEEECCHHH AIDRGIAFWSDLHEQANRLYDQGVPAQDATALIDIAKYPEAMVTLPIIVTAIYHERNPEI HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC PFQSLTQALESISGQLAKAAAGPK CHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA