Click here to switch to the map view.

The map label for this gene is yfiH [C]

Identifier: 169629097

GI number: 169629097

Start: 2010933

End: 2011640

Strand: Direct

Name: yfiH [C]

Synonym: MAB_2010

Alternate gene names: 169629097

Gene position: 2010933-2011640 (Clockwise)

Preceding gene: 169629096

Following gene: 169629098

Centisome position: 39.69

GC content: 67.23

Gene sequence:

>708_bases
ATGGGTTTTCGAGTTCGGCGTGTCACCACTACCCGGCGTGGCGGGGTATCGCGCGCTCCGTTTGACAGTTTCAACCTCGG
CGATCACGTCGGCGACGATCCCGGTGCGGTGGCCGCCAACCGGTCCCGTCTCGCCGCTGCGCTGGGAGTGCCCGACGATC
ATTTGATCTGGATGCAGCAGGTTCACGGAGACCACGTGCACCTGGTCGAAGGGCCGGGCACATCAACCATTCCGGAGACC
GACGCGCTGGTGACCACCGAACCGGGTATAGCGCTGGCGGTGCTGACGGCCGACTGTGTTCCGGTGCTGTTCGCCGATGC
CGCGGCCGGGGTTGTTGCCGGTGCTCACGCCGGACGGGTGGGTGCCAAACTCGGTATCGTGCCGCGGACCATCGACGCCA
TGGTGGCGGCCGGGGCACAGGTGGAACGCATCTCCGCCTTCCTCGGGCCCGCGGTCAGTGGTCGTCACTACGAGGTGCCG
GCCGATATGGCCGCCGATGTGGAGCAGTCGCTGCCGGGCAGCCGTACCACCACATCCGCCGGAACTCCGGGCCTGGACTT
GCGTGCCGGAATTGCCCGGCAGCTCTCTGGTTTGGGTGTGCGCGCGATCGATATCGACCCCAGGTGCACGGTCGAGGACC
CGGATCTGTTCAGTTATCGTCGGGAGCCCCGCACGGGCCGACTGGCGTCGGTGATCTGGCTCGGCTGA

Upstream 100 bases:

>100_bases
ACACCAACGGATCCACGGTGACACTCGGCGGTGGCGACGAGGACGATGTCGACGTGCCGCCCTTCATGCGGCGATGAGCG
TACGAACTACCCTCTGACGT

Downstream 100 bases:

>100_bases
TGACGCGCGCCGAGGAATTGAGTGCGGCACTGTGCTCGGTGCGGGAGCGCGTGAGGCGGGCCGCGGAAATCGCTGGTCGA
GATCCGGGCGAGATCCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MGFRVRRVTTTRRGGVSRAPFDSFNLGDHVGDDPGAVAANRSRLAAALGVPDDHLIWMQQVHGDHVHLVEGPGTSTIPET
DALVTTEPGIALAVLTADCVPVLFADAAAGVVAGAHAGRVGAKLGIVPRTIDAMVAAGAQVERISAFLGPAVSGRHYEVP
ADMAADVEQSLPGSRTTTSAGTPGLDLRAGIARQLSGLGVRAIDIDPRCTVEDPDLFSYRREPRTGRLASVIWLG

Sequences:

>Translated_235_residues
MGFRVRRVTTTRRGGVSRAPFDSFNLGDHVGDDPGAVAANRSRLAAALGVPDDHLIWMQQVHGDHVHLVEGPGTSTIPET
DALVTTEPGIALAVLTADCVPVLFADAAAGVVAGAHAGRVGAKLGIVPRTIDAMVAAGAQVERISAFLGPAVSGRHYEVP
ADMAADVEQSLPGSRTTTSAGTPGLDLRAGIARQLSGLGVRAIDIDPRCTVEDPDLFSYRREPRTGRLASVIWLG
>Mature_234_residues
GFRVRRVTTTRRGGVSRAPFDSFNLGDHVGDDPGAVAANRSRLAAALGVPDDHLIWMQQVHGDHVHLVEGPGTSTIPETD
ALVTTEPGIALAVLTADCVPVLFADAAAGVVAGAHAGRVGAKLGIVPRTIDAMVAAGAQVERISAFLGPAVSGRHYEVPA
DMAADVEQSLPGSRTTTSAGTPGLDLRAGIARQLSGLGVRAIDIDPRCTVEDPDLFSYRREPRTGRLASVIWLG

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=224, Percent_Identity=29.0178571428571, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI190194372, Length=224, Percent_Identity=29.0178571428571, Blast_Score=77, Evalue=1e-14,
Organism=Escherichia coli, GI1788945, Length=237, Percent_Identity=40.9282700421941, Blast_Score=142, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 24438; Mature: 24307

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFRVRRVTTTRRGGVSRAPFDSFNLGDHVGDDPGAVAANRSRLAAALGVPDDHLIWMQQ
CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHEEEECCCCCCCEEEEEE
VHGDHVHLVEGPGTSTIPETDALVTTEPGIALAVLTADCVPVLFADAAAGVVAGAHAGRV
CCCCEEEEEECCCCCCCCCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCC
GAKLGIVPRTIDAMVAAGAQVERISAFLGPAVSGRHYEVPADMAADVEQSLPGSRTTTSA
CCEECCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCC
GTPGLDLRAGIARQLSGLGVRAIDIDPRCTVEDPDLFSYRREPRTGRLASVIWLG
CCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
GFRVRRVTTTRRGGVSRAPFDSFNLGDHVGDDPGAVAANRSRLAAALGVPDDHLIWMQQ
CEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHEEEECCCCCCCEEEEEE
VHGDHVHLVEGPGTSTIPETDALVTTEPGIALAVLTADCVPVLFADAAAGVVAGAHAGRV
CCCCEEEEEECCCCCCCCCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCC
GAKLGIVPRTIDAMVAAGAQVERISAFLGPAVSGRHYEVPADMAADVEQSLPGSRTTTSA
CCEECCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCC
GTPGLDLRAGIARQLSGLGVRAIDIDPRCTVEDPDLFSYRREPRTGRLASVIWLG
CCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]