Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169629077

Identifier: 169629077

GI number: 169629077

Start: 1987616

End: 1988020

Strand: Direct

Name: 169629077

Synonym: MAB_1990

Alternate gene names: NA

Gene position: 1987616-1988020 (Clockwise)

Preceding gene: 169629074

Following gene: 169629080

Centisome position: 39.23

GC content: 64.69

Gene sequence:

>405_bases
ATGAGCGCAATTCCGTACGTTGCCGACACCCTTGACGCCGATGAGCCGCTGTTCACCCTCAAGGAGGTGGCCGCGCGCCT
ACGAGTGCCGGTGAGCAAGGTTCAGCAGTATTTGCGCGACGGTGAGCTGATCGCGGTCAAACGTGACGGCGAAATCAAGG
TTCCCGTCATCTTTTTCAGCCCGGAGGGGCCGGTGGTGAAGCACTTGTTCGGGCTGTTGTCCGTGCTGCGGGACGGTGGG
TACCACGAGCCCGAGATCCTGCGCTGGCTGTTCGCGGGCGATGAGTCGCTCACGGTGAGCAGGGATGGCACCACGGAGCG
AATCGAGGCGGCCCGCCCGGTCGACGCGCTGCACGGACATCAGGCACGTGAAGTGCTGCGCCGGGCGCAGGCCATGGCCT
ACTAG

Upstream 100 bases:

>100_bases
ATCGCCGGAACTCGTCACCGTCCGAAGGTTACGCGCGTCACCACACCCGGAGGACACTTTTCGACGACGGTGGCGCTCGG
GGCGACTAGCGTCATTTGTC

Downstream 100 bases:

>100_bases
GCGGCCGGCGCCGAGCCGTCCGGTTCGGGAGCGGTATTGATCATCCGCCAGGCGATGGCAGCGCACGTCGCAGCGATCAA
CACGTGGATCCATACGTACA

Product: hypothetical protein

Products: NA

Alternate protein names: Type IIA poisomerase A Subunit; Transcription Regulator

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSAIPYVADTLDADEPLFTLKEVAARLRVPVSKVQQYLRDGELIAVKRDGEIKVPVIFFSPEGPVVKHLFGLLSVLRDGG
YHEPEILRWLFAGDESLTVSRDGTTERIEAARPVDALHGHQAREVLRRAQAMAY

Sequences:

>Translated_134_residues
MSAIPYVADTLDADEPLFTLKEVAARLRVPVSKVQQYLRDGELIAVKRDGEIKVPVIFFSPEGPVVKHLFGLLSVLRDGG
YHEPEILRWLFAGDESLTVSRDGTTERIEAARPVDALHGHQAREVLRRAQAMAY
>Mature_133_residues
SAIPYVADTLDADEPLFTLKEVAARLRVPVSKVQQYLRDGELIAVKRDGEIKVPVIFFSPEGPVVKHLFGLLSVLRDGGY
HEPEILRWLFAGDESLTVSRDGTTERIEAARPVDALHGHQAREVLRRAQAMAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14965; Mature: 14834

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIPYVADTLDADEPLFTLKEVAARLRVPVSKVQQYLRDGELIAVKRDGEIKVPVIFFS
CCCCCCHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCEEEEEEEEC
PEGPVVKHLFGLLSVLRDGGYHEPEILRWLFAGDESLTVSRDGTTERIEAARPVDALHGH
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHCCCHHHHCCH
QAREVLRRAQAMAY
HHHHHHHHHHHHCC
>Mature Secondary Structure 
SAIPYVADTLDADEPLFTLKEVAARLRVPVSKVQQYLRDGELIAVKRDGEIKVPVIFFS
CCCCCHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCEEEEEEEEC
PEGPVVKHLFGLLSVLRDGGYHEPEILRWLFAGDESLTVSRDGTTERIEAARPVDALHGH
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHCCCHHHHCCH
QAREVLRRAQAMAY
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA