| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629076
Identifier: 169629076
GI number: 169629076
Start: 1987093
End: 1987533
Strand: Reverse
Name: 169629076
Synonym: MAB_1989c
Alternate gene names: NA
Gene position: 1987533-1987093 (Counterclockwise)
Preceding gene: 169629078
Following gene: 169629075
Centisome position: 39.22
GC content: 63.95
Gene sequence:
>441_bases GTGACGAGTTCCGGCGATCCGACATCGATCACCCACAGCGAGTACTACCCCTACCCTGTCGAAAAGGTGTGGGATGTGCT CGTCTCTCGCGAGCTCACCGCCTCACAGGTGAAGGAAGTCAGCGACGCACCGGTCGAGGTCGGATCGACTCGCGTGATGG TCACCCACCCTCAACCTGCCGTCGGATTCGACGGTGTGGTGTGCACCACCTACACCAGCGTGGAGCCCTACGAACACATC GAGCAGGTGTTGACCGCCCCCGGCATCGAAGTGACCTCCCGATGGAACCTGCTCCCCGAGCCCGGCGGCACCCGCCTGCG CGTCACCTACAGCCGGTTCGACCCGTCCATCCCGCTGCACCGCCAGTGGCGCACCATGCTGTTCTCGGGGGCCGGGCCGA TCCTCAACTCTTTGCGCGAAATGCTCGATAAGCGGCATTGA
Upstream 100 bases:
>100_bases GTACGGAATTGCGCTCATGACAAATGACGCTAGTCGCCCCGAGCGCCACCGTCGTCGAAAAGTGTCCTCCGGGTGTGGTG ACGCGCGTAACCTTCGGACG
Downstream 100 bases:
>100_bases CGGCGGGAGGTGCCCGCATCACTCGATACGATCGGTGCGATGACATCGCCCAAGTCCCCGACCGGCCGCCTCGATCCGAT GATCGGCGCGGTGCTCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTSSGDPTSITHSEYYPYPVEKVWDVLVSRELTASQVKEVSDAPVEVGSTRVMVTHPQPAVGFDGVVCTTYTSVEPYEHI EQVLTAPGIEVTSRWNLLPEPGGTRLRVTYSRFDPSIPLHRQWRTMLFSGAGPILNSLREMLDKRH
Sequences:
>Translated_146_residues MTSSGDPTSITHSEYYPYPVEKVWDVLVSRELTASQVKEVSDAPVEVGSTRVMVTHPQPAVGFDGVVCTTYTSVEPYEHI EQVLTAPGIEVTSRWNLLPEPGGTRLRVTYSRFDPSIPLHRQWRTMLFSGAGPILNSLREMLDKRH >Mature_145_residues TSSGDPTSITHSEYYPYPVEKVWDVLVSRELTASQVKEVSDAPVEVGSTRVMVTHPQPAVGFDGVVCTTYTSVEPYEHIE QVLTAPGIEVTSRWNLLPEPGGTRLRVTYSRFDPSIPLHRQWRTMLFSGAGPILNSLREMLDKRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16371; Mature: 16240
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSGDPTSITHSEYYPYPVEKVWDVLVSRELTASQVKEVSDAPVEVGSTRVMVTHPQPA CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCEECCCEEEEEECCCCC VGFDGVVCTTYTSVEPYEHIEQVLTAPGIEVTSRWNLLPEPGGTRLRVTYSRFDPSIPLH CCCCCEEEEEECCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCHH RQWRTMLFSGAGPILNSLREMLDKRH HHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure TSSGDPTSITHSEYYPYPVEKVWDVLVSRELTASQVKEVSDAPVEVGSTRVMVTHPQPA CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCEECCCEEEEEECCCCC VGFDGVVCTTYTSVEPYEHIEQVLTAPGIEVTSRWNLLPEPGGTRLRVTYSRFDPSIPLH CCCCCEEEEEECCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCHH RQWRTMLFSGAGPILNSLREMLDKRH HHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA