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The map label for this gene is ydhO [C]

Identifier: 169629061

GI number: 169629061

Start: 1972172

End: 1973317

Strand: Direct

Name: ydhO [C]

Synonym: MAB_1974

Alternate gene names: 169629061

Gene position: 1972172-1973317 (Clockwise)

Preceding gene: 169629060

Following gene: 169629062

Centisome position: 38.92

GC content: 68.41

Gene sequence:

>1146_bases
GTGAGTGTCGGGCGTCTTCTTCGAAATCACTCGGATCGACTGACGCCCTCTCCGCTCCGGCGCGCCATGCTTGCGGTCAC
TGCTGCGGCCCTGGTCGGCGGGGTATTTACGGGCGCGCAGACCGCGACCGCGGACCCCAACAACGACGCCGTCAAAAAGC
TCAACGAGCTGTCTCGTCAGGCCGAGGCAACATCCGAAGCAGCTAACACGGCGAAGATCGACTTGGATGCCAAGCTGGCC
GCTCAGCGCGACGCCGAGAAGACGGTTCTCGCCGATGAGGCCGTCGCGAAGGCCGCACGCATGGCGGTGTCCACCTACCA
GGTAGACGTCAACAAGGCGATGGTCGCCGCCTACATGGGCGGTACCACCAGTGGCTACGGTGCCGTGCTGACGTCCAACT
CCCCCCAGAACCTGATCGATCAGCTATCGGTACAGCGCACGGTCGGAGGTGAGATGCGCAGCCGGATGGACAGCTACCGC
GCTGCCCAGACCTCAGCCGACGAAGCCGAGCAGCGGTCCCGGGACGCCGCCGAGGCGGCGCGGGTGGCCGCCGAGCAGGC
CAAGAATGTGCGCGCGTCGCTGCAGGCGAAGCAGAGCCAGCTGCAGGTACAGATCGCCGTCGTCAAGTCGCAGTACAACA
CCCTGAGCCCCGGTCAGCGTGCCCAGTTGGCCGCACCGGCGCCGGTGCCCCCGCCGCCCGCGGCGGAGCCGGGCGAGGCC
GGCGACGCACCCGAGCCGCTGATGCAAGCCGCGGCCGCGGCACCGGCCCCGGAGGCCGCCATCGGCGGTGGCGGATCGCC
GGCCGGCGCGGGTGCTGTCGCAGCGGCGCTGACCCGGATCGGCGCACCCTACTCGTGGGGTGGTTCCGGCCCCAACGCCT
TCGACTGTTCGGGCCTGGTCATGTGGGCCTACGGCCAGCAGGGTGTGTCGCTGCCGCACTCCAGCCAGGCGCTGGCGCGT
GGCGGTACTCCCGTCTCGCTGAGTGAATTGCAGCCGGGCGACGTCATCAACTTTTACGGAGACGCCTCGCACACAGGTAT
CTATGTCGGCAACGGCATGATGGTGCACGCCTCCACCTACGGTGTTCCGGTGGCGGTCGTGCCGATCACATCATCCGGCC
CGATCTACAACGCACGCCGCTACTGA

Upstream 100 bases:

>100_bases
CACACTGCGGTGGACAACGCCGATGCCATTTCGTAACCTATCTGAGACCTATCGGCGCCGTGCTTCGCGGCGATCACATT
GCAGTAAAGGGATGTAGTCA

Downstream 100 bases:

>100_bases
GTCGCTGCGCGCCGCTTCTCGCGGTGGTCTTCGTGACGCTGTGCGGGGGGTGCGCGACACGGCCCGCCGCACCGGCCACT
CGGGCCGGCGATGCACGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MSVGRLLRNHSDRLTPSPLRRAMLAVTAAALVGGVFTGAQTATADPNNDAVKKLNELSRQAEATSEAANTAKIDLDAKLA
AQRDAEKTVLADEAVAKAARMAVSTYQVDVNKAMVAAYMGGTTSGYGAVLTSNSPQNLIDQLSVQRTVGGEMRSRMDSYR
AAQTSADEAEQRSRDAAEAARVAAEQAKNVRASLQAKQSQLQVQIAVVKSQYNTLSPGQRAQLAAPAPVPPPPAAEPGEA
GDAPEPLMQAAAAAPAPEAAIGGGGSPAGAGAVAAALTRIGAPYSWGGSGPNAFDCSGLVMWAYGQQGVSLPHSSQALAR
GGTPVSLSELQPGDVINFYGDASHTGIYVGNGMMVHASTYGVPVAVVPITSSGPIYNARRY

Sequences:

>Translated_381_residues
MSVGRLLRNHSDRLTPSPLRRAMLAVTAAALVGGVFTGAQTATADPNNDAVKKLNELSRQAEATSEAANTAKIDLDAKLA
AQRDAEKTVLADEAVAKAARMAVSTYQVDVNKAMVAAYMGGTTSGYGAVLTSNSPQNLIDQLSVQRTVGGEMRSRMDSYR
AAQTSADEAEQRSRDAAEAARVAAEQAKNVRASLQAKQSQLQVQIAVVKSQYNTLSPGQRAQLAAPAPVPPPPAAEPGEA
GDAPEPLMQAAAAAPAPEAAIGGGGSPAGAGAVAAALTRIGAPYSWGGSGPNAFDCSGLVMWAYGQQGVSLPHSSQALAR
GGTPVSLSELQPGDVINFYGDASHTGIYVGNGMMVHASTYGVPVAVVPITSSGPIYNARRY
>Mature_380_residues
SVGRLLRNHSDRLTPSPLRRAMLAVTAAALVGGVFTGAQTATADPNNDAVKKLNELSRQAEATSEAANTAKIDLDAKLAA
QRDAEKTVLADEAVAKAARMAVSTYQVDVNKAMVAAYMGGTTSGYGAVLTSNSPQNLIDQLSVQRTVGGEMRSRMDSYRA
AQTSADEAEQRSRDAAEAARVAAEQAKNVRASLQAKQSQLQVQIAVVKSQYNTLSPGQRAQLAAPAPVPPPPAAEPGEAG
DAPEPLMQAAAAAPAPEAAIGGGGSPAGAGAVAAALTRIGAPYSWGGSGPNAFDCSGLVMWAYGQQGVSLPHSSQALARG
GTPVSLSELQPGDVINFYGDASHTGIYVGNGMMVHASTYGVPVAVVPITSSGPIYNARRY

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787944, Length=118, Percent_Identity=37.2881355932203, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1788501, Length=104, Percent_Identity=38.4615384615385, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 39025; Mature: 38894

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVGRLLRNHSDRLTPSPLRRAMLAVTAAALVGGVFTGAQTATADPNNDAVKKLNELSRQ
CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
AEATSEAANTAKIDLDAKLAAQRDAEKTVLADEAVAKAARMAVSTYQVDVNKAMVAAYMG
HHHHHHHCCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHC
GTTSGYGAVLTSNSPQNLIDQLSVQRTVGGEMRSRMDSYRAAQTSADEAEQRSRDAAEAA
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RVAAEQAKNVRASLQAKQSQLQVQIAVVKSQYNTLSPGQRAQLAAPAPVPPPPAAEPGEA
HHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GDAPEPLMQAAAAAPAPEAAIGGGGSPAGAGAVAAALTRIGAPYSWGGSGPNAFDCSGLV
CCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE
MWAYGQQGVSLPHSSQALARGGTPVSLSELQPGDVINFYGDASHTGIYVGNGMMVHASTY
EEEECCCCCCCCCCCHHHHCCCCCEEHHCCCCCCEEEECCCCCCCEEEECCCEEEEEECC
GVPVAVVPITSSGPIYNARRY
CCEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SVGRLLRNHSDRLTPSPLRRAMLAVTAAALVGGVFTGAQTATADPNNDAVKKLNELSRQ
CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
AEATSEAANTAKIDLDAKLAAQRDAEKTVLADEAVAKAARMAVSTYQVDVNKAMVAAYMG
HHHHHHHCCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHC
GTTSGYGAVLTSNSPQNLIDQLSVQRTVGGEMRSRMDSYRAAQTSADEAEQRSRDAAEAA
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RVAAEQAKNVRASLQAKQSQLQVQIAVVKSQYNTLSPGQRAQLAAPAPVPPPPAAEPGEA
HHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GDAPEPLMQAAAAAPAPEAAIGGGGSPAGAGAVAAALTRIGAPYSWGGSGPNAFDCSGLV
CCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE
MWAYGQQGVSLPHSSQALARGGTPVSLSELQPGDVINFYGDASHTGIYVGNGMMVHASTY
EEEECCCCCCCCCCCHHHHCCCCCEEHHCCCCCCEEEECCCCCCCEEEECCCEEEEEECC
GVPVAVVPITSSGPIYNARRY
CCEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]