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The map label for this gene is qcrC [H]

Identifier: 169629055

GI number: 169629055

Start: 1966341

End: 1967228

Strand: Reverse

Name: qcrC [H]

Synonym: MAB_1968c

Alternate gene names: 169629055

Gene position: 1967228-1966341 (Counterclockwise)

Preceding gene: 169629056

Following gene: 169629054

Centisome position: 38.82

GC content: 67.23

Gene sequence:

>888_bases
ATGCCCGACGGCCCAAAGACCCAGCCCAGCCCGGTGAAGGGAGCACAACAGGTGAGCGTGGAGCCCGTAAAGGACACAGC
CGCCAAGAATCGCGCACGCCGCAAGTTCCGCCGTCGCGTCTCAGCAGGTTTGCTGCTGCTGATCGCGCTGGTGGTTGCCG
GCGGCTTGGCCTCTACCTTCACGCCCACCCCGCAGGTCGCGGTGGCCGACGAGGACAAGTCGGCTCTGCTGCGCACCGGT
AAGCAGTTGTACGAGACCTCGTGCATCACCTGCCACGGCGCAAACCTCCAGGGTGTGCCGGACCGCGGGCCCAGCCTGAT
CGGCGTGGGCGAGGCCGCGGTGTACTTCCAGGTCTCCACCGGACGTATGCCGGCCATGCGTAATGAGGCTCAGGCCCAGC
GCAAGGACCCGATCTTCGACGAGGAACAGACCGACGCCCTGGGCGCCTACATCCAGGCCAACGGCGGCGGCCCCCAGGTG
ATCCGCGACCGCGACGGCGCAGTGGCCCAGGAGTCGTTGCGCGGCAACAACATCGCCCGTGGTGGTGACCTGTTCCGTCT
CAACTGCGCGTCATGCCACAACTTCACCGGCCGCGGTGGCGCACTCTCGTCGGGCAAGTTCGCCCCCGAGCTCGACCCCG
CCACCGAGCAGCAGATTTACACCGCGATGCTGACCGGACCGCAGAACATGCCCAAGTTCTCGGATCGCCAGCTCACCGTT
GATGAGAAGAAGGACATCATCGCCTACGTCCGCGCCTCGTCCGAGACCCCGGACCCGGGCGGTTACGGCCTGGGCGGCTT
CGGACCGACGTCCGAGGGCATGGCCATGTGGATCATCGGCATCGTCGCCGCCATCGCCGCGGCACTGTGGATTGGAGCAC
GCGCGTGA

Upstream 100 bases:

>100_bases
TCCGGCCCAGGCGACCTCCGCGATCGTCGTGTCCTACTACTGGCACTTCGTCGACATCGTGTGGATCGCGTTGTTCGCCA
CCATCTACTTTGTCCGCTAA

Downstream 100 bases:

>100_bases
GCGTGAGTGACGCTGACAAGCCAGAGATCCCGAGCGACGAGCAGCTCGCGGCCATGAGCCGTGACGAGCTGGTCAAGCTC
GGCACCAACCTCGACGGCGT

Product: ubiquinol-cytochrome c reductase cytochrome c subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MPDGPKTQPSPVKGAQQVSVEPVKDTAAKNRARRKFRRRVSAGLLLLIALVVAGGLASTFTPTPQVAVADEDKSALLRTG
KQLYETSCITCHGANLQGVPDRGPSLIGVGEAAVYFQVSTGRMPAMRNEAQAQRKDPIFDEEQTDALGAYIQANGGGPQV
IRDRDGAVAQESLRGNNIARGGDLFRLNCASCHNFTGRGGALSSGKFAPELDPATEQQIYTAMLTGPQNMPKFSDRQLTV
DEKKDIIAYVRASSETPDPGGYGLGGFGPTSEGMAMWIIGIVAAIAAALWIGARA

Sequences:

>Translated_295_residues
MPDGPKTQPSPVKGAQQVSVEPVKDTAAKNRARRKFRRRVSAGLLLLIALVVAGGLASTFTPTPQVAVADEDKSALLRTG
KQLYETSCITCHGANLQGVPDRGPSLIGVGEAAVYFQVSTGRMPAMRNEAQAQRKDPIFDEEQTDALGAYIQANGGGPQV
IRDRDGAVAQESLRGNNIARGGDLFRLNCASCHNFTGRGGALSSGKFAPELDPATEQQIYTAMLTGPQNMPKFSDRQLTV
DEKKDIIAYVRASSETPDPGGYGLGGFGPTSEGMAMWIIGIVAAIAAALWIGARA
>Mature_294_residues
PDGPKTQPSPVKGAQQVSVEPVKDTAAKNRARRKFRRRVSAGLLLLIALVVAGGLASTFTPTPQVAVADEDKSALLRTGK
QLYETSCITCHGANLQGVPDRGPSLIGVGEAAVYFQVSTGRMPAMRNEAQAQRKDPIFDEEQTDALGAYIQANGGGPQVI
RDRDGAVAQESLRGNNIARGGDLFRLNCASCHNFTGRGGALSSGKFAPELDPATEQQIYTAMLTGPQNMPKFSDRQLTVD
EKKDIIAYVRASSETPDPGGYGLGGFGPTSEGMAMWIIGIVAAIAAALWIGARA

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR009152 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 31143; Mature: 31011

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDGPKTQPSPVKGAQQVSVEPVKDTAAKNRARRKFRRRVSAGLLLLIALVVAGGLASTF
CCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCC
TPTPQVAVADEDKSALLRTGKQLYETSCITCHGANLQGVPDRGPSLIGVGEAAVYFQVST
CCCCCEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEECCEEEEEEEEC
GRMPAMRNEAQAQRKDPIFDEEQTDALGAYIQANGGGPQVIRDRDGAVAQESLRGNNIAR
CCCCCHHHHHHHHHCCCCCCCCCHHHCEEEEEECCCCCCEEECCCCCHHHHHHCCCCCCC
GGDLFRLNCASCHNFTGRGGALSSGKFAPELDPATEQQIYTAMLTGPQNMPKFSDRQLTV
CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEC
DEKKDIIAYVRASSETPDPGGYGLGGFGPTSEGMAMWIIGIVAAIAAALWIGARA
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PDGPKTQPSPVKGAQQVSVEPVKDTAAKNRARRKFRRRVSAGLLLLIALVVAGGLASTF
CCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCC
TPTPQVAVADEDKSALLRTGKQLYETSCITCHGANLQGVPDRGPSLIGVGEAAVYFQVST
CCCCCEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEECCEEEEEEEEC
GRMPAMRNEAQAQRKDPIFDEEQTDALGAYIQANGGGPQVIRDRDGAVAQESLRGNNIAR
CCCCCHHHHHHHHHCCCCCCCCCHHHCEEEEEECCCCCCEEECCCCCHHHHHHCCCCCCC
GGDLFRLNCASCHNFTGRGGALSSGKFAPELDPATEQQIYTAMLTGPQNMPKFSDRQLTV
CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEC
DEKKDIIAYVRASSETPDPGGYGLGGFGPTSEGMAMWIIGIVAAIAAALWIGARA
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]