| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629045
Identifier: 169629045
GI number: 169629045
Start: 1955957
End: 1956499
Strand: Reverse
Name: 169629045
Synonym: MAB_1958c
Alternate gene names: NA
Gene position: 1956499-1955957 (Counterclockwise)
Preceding gene: 169629047
Following gene: 169629042
Centisome position: 38.61
GC content: 64.27
Gene sequence:
>543_bases ATGGCTGAACCAGGTTATTCGACGGTGCCCTACCCTGGTTTACCGCCCATGCCGCCACCGGTCGACTACCCCGAACGCAA GCGCAAGGTACCCGGCTGGCTCGCGCCCGCCGCGGTGGTGGCCGCCCTGCTGATACTGGCGCTGGTCTTGGGATTTCTGA CCAAGAATTCGGGCGTGTCCCAGCGGCCGAGCGAGGCGAAGATCGAACAGACCATCCAGGCCTACCTGGACGCGATGGCC AGACTCGACACCGTCACGCTGGCCCGCAATGCCGGCTGTGGCCTGTATGACGCCGTCCGCGACAAGGACACCGACGACAC GATCGTGCGCGCCAACGCCCAGCAGTTTGTGGCGACATTCGGCACGGCCACGGTCAAGTCGATCGACAAGATCGTCTACT TCTCCCAGTACCAGCTCAAGGTGCTGTTCACCGCCACCAGCCAGAAGCGCAAGGACGCCCCGCAGGGTCAGGCGGAGCTG CTGCTCAACGAGGGCAAGATCTACGTCTGCTCCGCCTACATGCGCGGAGCCAACGCGTACTGA
Upstream 100 bases:
>100_bases CCCAAAAGCTTACCTAACGTAACTGTTCGGGCGGTTGTCTCCGATTGCTAGCCTGGTTTGTTGGGGAGTGAGATCGGGGA CACGATTTTCAGGAGAATTA
Downstream 100 bases:
>100_bases TCAGTCGGTATCGATCAGTTGAAGGAGTCGCCGCACGCGCACGAGCCGGTGGCGTTCGGGTTGTCGATGGTGAAGCCCTG CTTCTCGATGGTGTCCACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MAEPGYSTVPYPGLPPMPPPVDYPERKRKVPGWLAPAAVVAALLILALVLGFLTKNSGVSQRPSEAKIEQTIQAYLDAMA RLDTVTLARNAGCGLYDAVRDKDTDDTIVRANAQQFVATFGTATVKSIDKIVYFSQYQLKVLFTATSQKRKDAPQGQAEL LLNEGKIYVCSAYMRGANAY
Sequences:
>Translated_180_residues MAEPGYSTVPYPGLPPMPPPVDYPERKRKVPGWLAPAAVVAALLILALVLGFLTKNSGVSQRPSEAKIEQTIQAYLDAMA RLDTVTLARNAGCGLYDAVRDKDTDDTIVRANAQQFVATFGTATVKSIDKIVYFSQYQLKVLFTATSQKRKDAPQGQAEL LLNEGKIYVCSAYMRGANAY >Mature_179_residues AEPGYSTVPYPGLPPMPPPVDYPERKRKVPGWLAPAAVVAALLILALVLGFLTKNSGVSQRPSEAKIEQTIQAYLDAMAR LDTVTLARNAGCGLYDAVRDKDTDDTIVRANAQQFVATFGTATVKSIDKIVYFSQYQLKVLFTATSQKRKDAPQGQAELL LNEGKIYVCSAYMRGANAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19605; Mature: 19474
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPGYSTVPYPGLPPMPPPVDYPERKRKVPGWLAPAAVVAALLILALVLGFLTKNSGVS CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC QRPSEAKIEQTIQAYLDAMARLDTVTLARNAGCGLYDAVRDKDTDDTIVRANAQQFVATF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEECCCHHHHHHHH GTATVKSIDKIVYFSQYQLKVLFTATSQKRKDAPQGQAELLLNEGKIYVCSAYMRGANAY HHHHHHHHHHHHHCCCEEEEEEEEECCHHHCCCCCCHHHEEEECCCEEEEEEECCCCCCC >Mature Secondary Structure AEPGYSTVPYPGLPPMPPPVDYPERKRKVPGWLAPAAVVAALLILALVLGFLTKNSGVS CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC QRPSEAKIEQTIQAYLDAMARLDTVTLARNAGCGLYDAVRDKDTDDTIVRANAQQFVATF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEECCCHHHHHHHH GTATVKSIDKIVYFSQYQLKVLFTATSQKRKDAPQGQAELLLNEGKIYVCSAYMRGANAY HHHHHHHHHHHHHCCCEEEEEEEEECCHHHCCCCCCHHHEEEECCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]