Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169629033

Identifier: 169629033

GI number: 169629033

Start: 1945136

End: 1945366

Strand: Direct

Name: 169629033

Synonym: MAB_1946

Alternate gene names: NA

Gene position: 1945136-1945366 (Clockwise)

Preceding gene: 169629027

Following gene: 169629034

Centisome position: 38.39

GC content: 64.07

Gene sequence:

>231_bases
GTGAGCGAGCGCACAGTGGTCTGCGTCATCAAGCCGGGCAGCCGCAAGGGTCCGGCGGTAGAGGTTGCCGACGATGGCGC
ACTGACGCTGTTCGTGCGCGAGCCGGCCATCGACGGCAAGGCCAACAAGGCAGCGATCGCGTTGCTGGCGGAGTACCTGG
ATGTTCCGAAATCGACGGTACGGCTGGTTGCCGGGCAGACCAGCAGACTGAAGCGATTCTCGGTCGGATAA

Upstream 100 bases:

>100_bases
AACAAAGACGACTCTTCATGGCTTACCACAGCTGCGTGTCAGCCGGGTCAATCCTGTCACTGAGTGGAACGACGCGCCTG
CCCGGGTCCAAGATCGAGGA

Downstream 100 bases:

>100_bases
CAGCACGTTCTCAGAATTAGCTGGCACCATGAGCCCATGGCATGGATCGACGCCTTCCGCGGCAAGCGAGAGGGGCAGAC
CAAACAGGGCACGAACGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MSERTVVCVIKPGSRKGPAVEVADDGALTLFVREPAIDGKANKAAIALLAEYLDVPKSTVRLVAGQTSRLKRFSVG

Sequences:

>Translated_76_residues
MSERTVVCVIKPGSRKGPAVEVADDGALTLFVREPAIDGKANKAAIALLAEYLDVPKSTVRLVAGQTSRLKRFSVG
>Mature_75_residues
SERTVVCVIKPGSRKGPAVEVADDGALTLFVREPAIDGKANKAAIALLAEYLDVPKSTVRLVAGQTSRLKRFSVG

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003746 [H]

Pfam domain/function: PF02594 DUF167 [H]

EC number: NA

Molecular weight: Translated: 8039; Mature: 7908

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERTVVCVIKPGSRKGPAVEVADDGALTLFVREPAIDGKANKAAIALLAEYLDVPKSTV
CCCCEEEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHE
RLVAGQTSRLKRFSVG
EEECCCCCCCEEECCC
>Mature Secondary Structure 
SERTVVCVIKPGSRKGPAVEVADDGALTLFVREPAIDGKANKAAIALLAEYLDVPKSTV
CCCEEEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHE
RLVAGQTSRLKRFSVG
EEECCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA