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The map label for this gene is 169629012

Identifier: 169629012

GI number: 169629012

Start: 1925721

End: 1926170

Strand: Direct

Name: 169629012

Synonym: MAB_1924

Alternate gene names: NA

Gene position: 1925721-1926170 (Clockwise)

Preceding gene: 169629010

Following gene: 169629013

Centisome position: 38.0

GC content: 64.0

Gene sequence:

>450_bases
ATGAGTCAAGATGGTGTGGGTGTCGACTTGGAGACCTCGCTGGGCTACCTGCTCAAAGAGACGTCGAGCGCTTTGCGCAC
GGCCATGGAGGAGGTGTTGCGGCCGCTCGGGATGAGCATCACGCATTACTCGTGCCTGGAGCTGTTGGCGCAACGCCCGG
GGCTTTCGAACTCCGAGCTCGCACGAGGGGCATTCGTGACACGGCAGACGATGAATGTGCTGCTGCAGAACCTGGAACGA
GACGGCTACGTGACCAGGCCCGCAGAAGCGCCCGTCGGCAAGGTGCTTCCCGTCCGGCTCACGTCGCGGGGCAGGCGCAG
CCTGCAGAAGGCGAGTGCCGCGGTCCGCTCCGTAGAACTCAGAATGCTGGCCGGCATGACCACGACCGAACAGTCGGACG
CCTTCCGGCTGTTGCGGCTCATGATTCATGCCCTGCGAGACGGTGCCTAG

Upstream 100 bases:

>100_bases
CTTGAAGTGAGATGAAATCTGGACCGGTGACCGGCATGGGAACGCTCCTTTTATTCATGTCAGCTTACTGACATGAATAA
ATGTATGTCAGAATTCTGAC

Downstream 100 bases:

>100_bases
TCCACCCGGGGTGTCCGACCTCCTGAACTACAGCACTGTAATTTTCAGCACGCTTCTCATGGTTTCTTAACGTTCAGGCC
ATGACCGTCCAACCAATGCT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSQDGVGVDLETSLGYLLKETSSALRTAMEEVLRPLGMSITHYSCLELLAQRPGLSNSELARGAFVTRQTMNVLLQNLER
DGYVTRPAEAPVGKVLPVRLTSRGRRSLQKASAAVRSVELRMLAGMTTTEQSDAFRLLRLMIHALRDGA

Sequences:

>Translated_149_residues
MSQDGVGVDLETSLGYLLKETSSALRTAMEEVLRPLGMSITHYSCLELLAQRPGLSNSELARGAFVTRQTMNVLLQNLER
DGYVTRPAEAPVGKVLPVRLTSRGRRSLQKASAAVRSVELRMLAGMTTTEQSDAFRLLRLMIHALRDGA
>Mature_148_residues
SQDGVGVDLETSLGYLLKETSSALRTAMEEVLRPLGMSITHYSCLELLAQRPGLSNSELARGAFVTRQTMNVLLQNLERD
GYVTRPAEAPVGKVLPVRLTSRGRRSLQKASAAVRSVELRMLAGMTTTEQSDAFRLLRLMIHALRDGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16344; Mature: 16213

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDGVGVDLETSLGYLLKETSSALRTAMEEVLRPLGMSITHYSCLELLAQRPGLSNSEL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHH
ARGAFVTRQTMNVLLQNLERDGYVTRPAEAPVGKVLPVRLTSRGRRSLQKASAAVRSVEL
HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
RMLAGMTTTEQSDAFRLLRLMIHALRDGA
HHHHCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQDGVGVDLETSLGYLLKETSSALRTAMEEVLRPLGMSITHYSCLELLAQRPGLSNSEL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHH
ARGAFVTRQTMNVLLQNLERDGYVTRPAEAPVGKVLPVRLTSRGRRSLQKASAAVRSVEL
HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
RMLAGMTTTEQSDAFRLLRLMIHALRDGA
HHHHCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]