| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628996
Identifier: 169628996
GI number: 169628996
Start: 1905669
End: 1906898
Strand: Reverse
Name: 169628996
Synonym: MAB_1908c
Alternate gene names: NA
Gene position: 1906898-1905669 (Counterclockwise)
Preceding gene: 169628997
Following gene: 169628989
Centisome position: 37.63
GC content: 68.7
Gene sequence:
>1230_bases ATGATCACCTGGCGTGCGTCTGCGTTGATATCGGCGCTGGCGGCATGCACCGGTGCCGCGTTGGCACTCGCGGTGATGAC GGGACGCTGGCAGCTGGTGGTGTTCGCGGCACCGTTCGTCGGTGCGCTCGCCGGGGCGTCGCGGCGACCGCCGGCGGCCC GCGCGTGGGTCACCGATGAGCCAGAACCCTTGCGGTGCCTGGAATCAGAGACCATAACCGTTGCCGTGTCGGTGGAATCT ACCGGACCCGCCGTGGTGTGTGGACTACGCCCGGCACTCGTCGAGGGGCTGCGGATCGACGCGGACAGGCCCGCGGCGCC CAACCAACTGACCATGCGGACATCAGCCCAGCGGTGGGGCCGGTACCGCGTTCCGGTTGAGGTTCGGTCGGTGTCGGCCT CCGGTCTATGGGCCGGTACCGCGCTGACGCTGCCTGCCAGCGAGCTGCGCGTGTATCCCTTGGCCGATCCGCAAGACGTC GCACTGCCCCCAGCCGATCTGCCCGACCGGATCGGCACGCGTTTGACGCGCCACCACGGCCCGGGCGTCGAGTACGCGGA CATCCGCGAGTACGTACCGGGCGACTCGCTGCGCACCGTCAATTGGCGGGTGAGTGCGCAACGGGGACGCTTACATGTCA CCGACCGGCTCACCGATCGAGCCGCCGATGTTGTCGTACTCATCGACACGTACCCGCAGCCGTCCGGCCCGGCGACCACC GCGACCGAGCGATCGGCACGGGGAGCGGCCCAGCTGGTGCAGTCGGTGTTGCAGCGGGGTGACCGTGCGGGGGTCGTCGT GCTGGGCAGTTCCGCGCGCTGGCTCGCCCCGAACATCGGCCGCCATCAGTTCTATCGGCTGCTTGACGCCACTCTCGATG CCGGAGAATGGCATTCGCACAGCGCAAGTGCCCTTGCCCCACGTGCCGCCGTGCCACCCAACGCGATCGTGGTCGCGTTT TCCACCCTTCTGAACGCCGACTTTGGCCTGGCACTGACCGACCTGCGGCGCCGCGGGCATCCCGTTGTGGTGGTCGATGT GCTCGATCGCCTGCCATTCCGCGAGGAACCCGATCCCATCGTGGCCCGGTGGTGGCGGCTGGAACGCTCGCGGATGTACC GCAATATCGCCGTCACGGGGGTCGACGTTGTCGGCTGGAGCCATGACTCCGGGCTCAATCATGCGATGCACCTGATGCCA CGCCGTCCCCGGCGAGGACGACGGCGGTGA
Upstream 100 bases:
>100_bases ACCGGATCAGTCTGCGCCCCGAGATGTGGGTGCGCCGCATCACCGGCGCACACGTGGTCGACGAGCTGTTGCACCGTCTG CCGGTGCCTCGGGCTTCCGG
Downstream 100 bases:
>100_bases ACACACGTGCGATGTTGGCCGGTGTCTTCGGGCTCGTCATGGTGCTCGCGACCGTCGGCGGGTTCCCGGTCTCGGTATGC GCGGCGGTCCTTGTGATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MITWRASALISALAACTGAALALAVMTGRWQLVVFAAPFVGALAGASRRPPAARAWVTDEPEPLRCLESETITVAVSVES TGPAVVCGLRPALVEGLRIDADRPAAPNQLTMRTSAQRWGRYRVPVEVRSVSASGLWAGTALTLPASELRVYPLADPQDV ALPPADLPDRIGTRLTRHHGPGVEYADIREYVPGDSLRTVNWRVSAQRGRLHVTDRLTDRAADVVVLIDTYPQPSGPATT ATERSARGAAQLVQSVLQRGDRAGVVVLGSSARWLAPNIGRHQFYRLLDATLDAGEWHSHSASALAPRAAVPPNAIVVAF STLLNADFGLALTDLRRRGHPVVVVDVLDRLPFREEPDPIVARWWRLERSRMYRNIAVTGVDVVGWSHDSGLNHAMHLMP RRPRRGRRR
Sequences:
>Translated_409_residues MITWRASALISALAACTGAALALAVMTGRWQLVVFAAPFVGALAGASRRPPAARAWVTDEPEPLRCLESETITVAVSVES TGPAVVCGLRPALVEGLRIDADRPAAPNQLTMRTSAQRWGRYRVPVEVRSVSASGLWAGTALTLPASELRVYPLADPQDV ALPPADLPDRIGTRLTRHHGPGVEYADIREYVPGDSLRTVNWRVSAQRGRLHVTDRLTDRAADVVVLIDTYPQPSGPATT ATERSARGAAQLVQSVLQRGDRAGVVVLGSSARWLAPNIGRHQFYRLLDATLDAGEWHSHSASALAPRAAVPPNAIVVAF STLLNADFGLALTDLRRRGHPVVVVDVLDRLPFREEPDPIVARWWRLERSRMYRNIAVTGVDVVGWSHDSGLNHAMHLMP RRPRRGRRR >Mature_409_residues MITWRASALISALAACTGAALALAVMTGRWQLVVFAAPFVGALAGASRRPPAARAWVTDEPEPLRCLESETITVAVSVES TGPAVVCGLRPALVEGLRIDADRPAAPNQLTMRTSAQRWGRYRVPVEVRSVSASGLWAGTALTLPASELRVYPLADPQDV ALPPADLPDRIGTRLTRHHGPGVEYADIREYVPGDSLRTVNWRVSAQRGRLHVTDRLTDRAADVVVLIDTYPQPSGPATT ATERSARGAAQLVQSVLQRGDRAGVVVLGSSARWLAPNIGRHQFYRLLDATLDAGEWHSHSASALAPRAAVPPNAIVVAF STLLNADFGLALTDLRRRGHPVVVVDVLDRLPFREEPDPIVARWWRLERSRMYRNIAVTGVDVVGWSHDSGLNHAMHLMP RRPRRGRRR
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44556; Mature: 44556
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITWRASALISALAACTGAALALAVMTGRWQLVVFAAPFVGALAGASRRPPAARAWVTDE CCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHCCCCCCCCCCCCCCCCC PEPLRCLESETITVAVSVESTGPAVVCGLRPALVEGLRIDADRPAAPNQLTMRTSAQRWG CCHHHHCCCCEEEEEEEECCCCCEEEECCCHHHHCCEEECCCCCCCCCCEEEEHHHHHCC RYRVPVEVRSVSASGLWAGTALTLPASELRVYPLADPQDVALPPADLPDRIGTRLTRHHG EEECCEEEEEECCCCEEECEEEECCHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCC PGVEYADIREYVPGDSLRTVNWRVSAQRGRLHVTDRLTDRAADVVVLIDTYPQPSGPATT CCCCHHHHHHHCCCCCEEEEEEEEECCCCEEEEEHHHHCCCCCEEEEEECCCCCCCCCCC ATERSARGAAQLVQSVLQRGDRAGVVVLGSSARWLAPNIGRHQFYRLLDATLDAGEWHSH CHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC SASALAPRAAVPPNAIVVAFSTLLNADFGLALTDLRRRGHPVVVVDVLDRLPFREEPDPI CCHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEHHHHCCCCCCCCHH VARWWRLERSRMYRNIAVTGVDVVGWSHDSGLNHAMHLMPRRPRRGRRR HHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCCHHHHHCCCCCCCCCCC >Mature Secondary Structure MITWRASALISALAACTGAALALAVMTGRWQLVVFAAPFVGALAGASRRPPAARAWVTDE CCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHCCCCCCCCCCCCCCCCC PEPLRCLESETITVAVSVESTGPAVVCGLRPALVEGLRIDADRPAAPNQLTMRTSAQRWG CCHHHHCCCCEEEEEEEECCCCCEEEECCCHHHHCCEEECCCCCCCCCCEEEEHHHHHCC RYRVPVEVRSVSASGLWAGTALTLPASELRVYPLADPQDVALPPADLPDRIGTRLTRHHG EEECCEEEEEECCCCEEECEEEECCHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCC PGVEYADIREYVPGDSLRTVNWRVSAQRGRLHVTDRLTDRAADVVVLIDTYPQPSGPATT CCCCHHHHHHHCCCCCEEEEEEEEECCCCEEEEEHHHHCCCCCEEEEEECCCCCCCCCCC ATERSARGAAQLVQSVLQRGDRAGVVVLGSSARWLAPNIGRHQFYRLLDATLDAGEWHSH CHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC SASALAPRAAVPPNAIVVAFSTLLNADFGLALTDLRRRGHPVVVVDVLDRLPFREEPDPI CCHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEHHHHCCCCCCCCHH VARWWRLERSRMYRNIAVTGVDVVGWSHDSGLNHAMHLMPRRPRRGRRR HHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCCHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA