| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628796
Identifier: 169628796
GI number: 169628796
Start: 1733588
End: 1735603
Strand: Reverse
Name: 169628796
Synonym: MAB_1706c
Alternate gene names: NA
Gene position: 1735603-1733588 (Counterclockwise)
Preceding gene: 169628799
Following gene: 169628795
Centisome position: 34.25
GC content: 68.11
Gene sequence:
>2016_bases ATGCGTCTGCTGCGTGCCCTCGCGGGCCTGCTCGGAGTCCTCATCGCGGTCTGTGCCCCGACGCTGCTGCTGGCACCGGT GGCGAGCGCCGATCCGCCGTTCCGGATACCGGGCTATGTCACCGACCGGGCCGGGGCGCTGAAAAACCCGGCGAAGGTGC GCGCCGCCGTCGACCAGCTCTACGACCAGCAGCACGTCCGGCTCTGGGTGGTATACGTCAAGGACTTCGAGGGCACCGAC CCAACGGCGTGGGCGGACAAGACCATCAAGGCCAGCAACCTGGGAGACCGTGACGCCCTGCTGGCGGTGGCGACCGAGGA GCGCAGCTACGCGTTCCAGGTGGCCTCGGGTATCAAGAACGTCAGCGACTCGGAGATCGAGAATCTGCGGACCAACACGA TCGAACCCGCGCTACGCACGTCGGACTGGGACGGCGCCGCCATCAAGACCGCCACCGGGCTGGAATCAGCCGCCTCCTCA TCGGCCTCCATTCCCTGGAAGCCGGTCCTGGGTGCACTGGCCTTTGGCGCCGTGTTGGTCGGCGCGTTCATGCTGTTCTC CTGGTTCCGCACCCGCTCGCGCCGGCGGGCGGAAATCGAAGCGGCCAAGGGCATCGACCCCTCGGACGCCGAGGCGCTGG CGAAGCAGCCGGTCACCGCGCTGGACGGCTTGTCCAAATCCATTGTGGTGAACGTCGACAACGCGGTGCGTACCAGCGAG GCCGAACTCGCGCTGGCCGTCGAGGAATTTGGCACCGAATCCACCGCGCCCTTTCAGCAGGCCGTCGATTCGGCAAAAAA GGCACTGGCCCAAGCATTCTCGGTGCGCAAGCAGCTCGATGACGCGATCCCGGAAACACCGCTGGAACAGCGGCGGCTGC TGATCGACGTCATCACCACGGCCGCCCGCGCCGATCGCACCCTGGAGGACCAGTCCAGCGCCTTCGACGCGTTACGGAAC TTGGTGATCAACGCGCCCGCCAAGCTGGATACCCTCACGCAACAGGTGGTGGCCGTCACCGCCCGGCTACCGGAGTCCGA ACGGATTCTCGGCCAGCTGCGCACCGAATTCGATGCCGCGGCATTGGCATCCATCGGTGACAACGTCGCCGAGGCCACCG AGCGTGTCCGCTTTGCCGATTCCCGCATCACGCACGGGCGCGAACTGGCGGCCCGCGCCCTGGAGGGCCAGCAGATGAGC CTCGTGGATGCCATCCGTGGTGCCGAATCGGCGCTGACGCAGGCCAACGCCCTGCTGGACGCGATCGACAACGCCGCCAA CAACATCCGCCACGCCATCGACTCGCTGGCCGCGTCCATCGCCGACACGAAATCCGATATCGCGCAGGCCGAAGAATTCC AGAAACAAGGCAGGCTGCCGTCCTCGGAGGAGTTGACCAAGGCGCACGACGCCGCCGTGGCGGCCGTCGCCGACGCCGAG CGCATCGGCGCGACCGACCCGCTGACCGCGTTCACTCACCTCGCTGCCGCCGACGCACAGCTGGACAAACTCTTGGCGGC GGCACAGGAAGAAAGGGCGGCCGCGGAACGGCGTGCCCGCGTGCTCGATCAAGCGCTCGTGGCCGCGCGCCAGCGACTGG ACGCGGTCAACCAGTACATCGGCCTGCACCGCGGCGCCGTGGGCGCCAGGACGCGCTGGAATCTGGATGAGGCACAGCGC CGGCTGGCCGCTGCCGAGCAGAGCCGGGCCTCCAATCCGTCCGATGCGATCCTCTTCGCCAACGGCGCCGCCGAACTGGC GACCCAGGCCCAATACTCGGCACAGCAGGAGGTGCAGAGCGCTCAGCGGTATTACGGCAACGGATACGGCGGGTACAGCG TGGCCGGCGACGTGGCCGGCAATGTCGCCGGCGCGGTGATCGGCGGAATCCTGCGCGGCATGCTCAGCGGTGGAGCGGGC CACCACAGCTCCTGGTCAGGTTCCGGGTCGTCGTCCTACGGCGGATCCTCCCGATCCTCCGGATCGAGCTTCCGCGGCGG CGGGGGCCGCTTCTAA
Upstream 100 bases:
>100_bases CGTTCACGGTCGGAATCGGTGTAGGCATCCTTTTTACGCATCGTAGGCACAGTCTGCCAGGGCGGGTCGAAGCGTCTTGC GAGGCACTAGATTGACGACC
Downstream 100 bases:
>100_bases CTGGCCGCATCCATCCGGCGCGGCCCTGGTACTTGACCTGCGCCGCCTACCGATGTGCAATATATTGCATGCCGGTACCG CCCTCGGAGGGCATCGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 671; Mature: 671
Protein sequence:
>671_residues MRLLRALAGLLGVLIAVCAPTLLLAPVASADPPFRIPGYVTDRAGALKNPAKVRAAVDQLYDQQHVRLWVVYVKDFEGTD PTAWADKTIKASNLGDRDALLAVATEERSYAFQVASGIKNVSDSEIENLRTNTIEPALRTSDWDGAAIKTATGLESAASS SASIPWKPVLGALAFGAVLVGAFMLFSWFRTRSRRRAEIEAAKGIDPSDAEALAKQPVTALDGLSKSIVVNVDNAVRTSE AELALAVEEFGTESTAPFQQAVDSAKKALAQAFSVRKQLDDAIPETPLEQRRLLIDVITTAARADRTLEDQSSAFDALRN LVINAPAKLDTLTQQVVAVTARLPESERILGQLRTEFDAAALASIGDNVAEATERVRFADSRITHGRELAARALEGQQMS LVDAIRGAESALTQANALLDAIDNAANNIRHAIDSLAASIADTKSDIAQAEEFQKQGRLPSSEELTKAHDAAVAAVADAE RIGATDPLTAFTHLAAADAQLDKLLAAAQEERAAAERRARVLDQALVAARQRLDAVNQYIGLHRGAVGARTRWNLDEAQR RLAAAEQSRASNPSDAILFANGAAELATQAQYSAQQEVQSAQRYYGNGYGGYSVAGDVAGNVAGAVIGGILRGMLSGGAG HHSSWSGSGSSSYGGSSRSSGSSFRGGGGRF
Sequences:
>Translated_671_residues MRLLRALAGLLGVLIAVCAPTLLLAPVASADPPFRIPGYVTDRAGALKNPAKVRAAVDQLYDQQHVRLWVVYVKDFEGTD PTAWADKTIKASNLGDRDALLAVATEERSYAFQVASGIKNVSDSEIENLRTNTIEPALRTSDWDGAAIKTATGLESAASS SASIPWKPVLGALAFGAVLVGAFMLFSWFRTRSRRRAEIEAAKGIDPSDAEALAKQPVTALDGLSKSIVVNVDNAVRTSE AELALAVEEFGTESTAPFQQAVDSAKKALAQAFSVRKQLDDAIPETPLEQRRLLIDVITTAARADRTLEDQSSAFDALRN LVINAPAKLDTLTQQVVAVTARLPESERILGQLRTEFDAAALASIGDNVAEATERVRFADSRITHGRELAARALEGQQMS LVDAIRGAESALTQANALLDAIDNAANNIRHAIDSLAASIADTKSDIAQAEEFQKQGRLPSSEELTKAHDAAVAAVADAE RIGATDPLTAFTHLAAADAQLDKLLAAAQEERAAAERRARVLDQALVAARQRLDAVNQYIGLHRGAVGARTRWNLDEAQR RLAAAEQSRASNPSDAILFANGAAELATQAQYSAQQEVQSAQRYYGNGYGGYSVAGDVAGNVAGAVIGGILRGMLSGGAG HHSSWSGSGSSSYGGSSRSSGSSFRGGGGRF >Mature_671_residues MRLLRALAGLLGVLIAVCAPTLLLAPVASADPPFRIPGYVTDRAGALKNPAKVRAAVDQLYDQQHVRLWVVYVKDFEGTD PTAWADKTIKASNLGDRDALLAVATEERSYAFQVASGIKNVSDSEIENLRTNTIEPALRTSDWDGAAIKTATGLESAASS SASIPWKPVLGALAFGAVLVGAFMLFSWFRTRSRRRAEIEAAKGIDPSDAEALAKQPVTALDGLSKSIVVNVDNAVRTSE AELALAVEEFGTESTAPFQQAVDSAKKALAQAFSVRKQLDDAIPETPLEQRRLLIDVITTAARADRTLEDQSSAFDALRN LVINAPAKLDTLTQQVVAVTARLPESERILGQLRTEFDAAALASIGDNVAEATERVRFADSRITHGRELAARALEGQQMS LVDAIRGAESALTQANALLDAIDNAANNIRHAIDSLAASIADTKSDIAQAEEFQKQGRLPSSEELTKAHDAAVAAVADAE RIGATDPLTAFTHLAAADAQLDKLLAAAQEERAAAERRARVLDQALVAARQRLDAVNQYIGLHRGAVGARTRWNLDEAQR RLAAAEQSRASNPSDAILFANGAAELATQAQYSAQQEVQSAQRYYGNGYGGYSVAGDVAGNVAGAVIGGILRGMLSGGAG HHSSWSGSGSSSYGGSSRSSGSSFRGGGGRF
Specific function: May play a role in septum formation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 70847; Mature: 70847
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLRALAGLLGVLIAVCAPTLLLAPVASADPPFRIPGYVTDRAGALKNPAKVRAAVDQL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH YDQQHVRLWVVYVKDFEGTDPTAWADKTIKASNLGDRDALLAVATEERSYAFQVASGIKN HCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCC VSDSEIENLRTNTIEPALRTSDWDGAAIKTATGLESAASSSASIPWKPVLGALAFGAVLV CCHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHH GAFMLFSWFRTRSRRRAEIEAAKGIDPSDAEALAKQPVTALDGLSKSIVVNVDNAVRTSE HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHCCCCEEEEECCCHHHCCC AELALAVEEFGTESTAPFQQAVDSAKKALAQAFSVRKQLDDAIPETPLEQRRLLIDVITT HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AARADRTLEDQSSAFDALRNLVINAPAKLDTLTQQVVAVTARLPESERILGQLRTEFDAA HHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ALASIGDNVAEATERVRFADSRITHGRELAARALEGQQMSLVDAIRGAESALTQANALLD HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AIDNAANNIRHAIDSLAASIADTKSDIAQAEEFQKQGRLPSSEELTKAHDAAVAAVADAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RIGATDPLTAFTHLAAADAQLDKLLAAAQEERAAAERRARVLDQALVAARQRLDAVNQYI HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLHRGAVGARTRWNLDEAQRRLAAAEQSRASNPSDAILFANGAAELATQAQYSAQQEVQS HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH AQRYYGNGYGGYSVAGDVAGNVAGAVIGGILRGMLSGGAGHHSSWSGSGSSSYGGSSRSS HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GSSFRGGGGRF CCCCCCCCCCC >Mature Secondary Structure MRLLRALAGLLGVLIAVCAPTLLLAPVASADPPFRIPGYVTDRAGALKNPAKVRAAVDQL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH YDQQHVRLWVVYVKDFEGTDPTAWADKTIKASNLGDRDALLAVATEERSYAFQVASGIKN HCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCC VSDSEIENLRTNTIEPALRTSDWDGAAIKTATGLESAASSSASIPWKPVLGALAFGAVLV CCHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHH GAFMLFSWFRTRSRRRAEIEAAKGIDPSDAEALAKQPVTALDGLSKSIVVNVDNAVRTSE HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHCCCCEEEEECCCHHHCCC AELALAVEEFGTESTAPFQQAVDSAKKALAQAFSVRKQLDDAIPETPLEQRRLLIDVITT HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AARADRTLEDQSSAFDALRNLVINAPAKLDTLTQQVVAVTARLPESERILGQLRTEFDAA HHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ALASIGDNVAEATERVRFADSRITHGRELAARALEGQQMSLVDAIRGAESALTQANALLD HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AIDNAANNIRHAIDSLAASIADTKSDIAQAEEFQKQGRLPSSEELTKAHDAAVAAVADAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RIGATDPLTAFTHLAAADAQLDKLLAAAQEERAAAERRARVLDQALVAARQRLDAVNQYI HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLHRGAVGARTRWNLDEAQRRLAAAEQSRASNPSDAILFANGAAELATQAQYSAQQEVQS HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH AQRYYGNGYGGYSVAGDVAGNVAGAVIGGILRGMLSGGAGHHSSWSGSGSSSYGGSSRSS HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GSSFRGGGGRF CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]