| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628740
Identifier: 169628740
GI number: 169628740
Start: 1679278
End: 1680828
Strand: Reverse
Name: 169628740
Synonym: MAB_1650c
Alternate gene names: NA
Gene position: 1680828-1679278 (Counterclockwise)
Preceding gene: 169628747
Following gene: 169628739
Centisome position: 33.17
GC content: 69.63
Gene sequence:
>1551_bases ATGACCGGGTTGCACACGAAATGCCTGTTCCTGGTGCTTGCACTATTCACACTGTTCAGCGGTACCCCGGTCGCGCTGGC CGACTCCGCGAGCGCCGGCGCCGACGTGCAGGTCGCGCAAAGTCTCGGCGAGCGAGAGCTCACCGTCGTCGCCCGTCGGG TCACCAGCATCCCCGGCCCGCTATATGTCGACGTCATCACCCATCAGGGCGCCCCCGCGGGCCCGCTCCGCGTACAGCTC GTGCCCACCGGTGCCGATACCGACGAACACGAACCCGCACCGGGCGTGCCGACATCGACAGAAATGGTTGTCCTCGGTGA CAAACCGGGGCCGTACAGCACGACGCTCGACGTTGACCGCCCCGGCCCGGCCGACCTCACCATCAGCGATGGTGTGCACA TCTCCAGGATCCCCCTGGTTCTCACGGGGCAGGCGATGTCGCCGCCGGAGCGGGTGGCCTATGTGGGCCTGGCCACGACC GGGCTGCTGTTGGTGATCTCGCTGGTGGTGGCCACCCGGGTGCGTCGCGGAGTGTGGATCGCGCTGCCCGTCACGGCCAC GGTGGCGGCTCTCGCGGTGGCCATCACCGGCGCCGTGCTGTCCACGTCGGCGCCACCGCCGCCGGAGCCTGGCCCGCAAC GCGACCCGACCGTCGACAATGCCGCCAATCCGTACCGGCTCGACCGTCCCGCAGTCACCGACTACTCACGGCCGTCGGCG ATGCTCGTGGCCGAACAACCCGAACTGGACCCGGGACACGCGACCGACATCTACTTCTCGCTCATCGACACCGCCACCGG GCTGCCCGCCGATGACCTGGTGATCCACGACAGCGCGCTGATCCACCTGCTCGTGGTGGCCCCCGACGGGCAGCTGTCCC ATCTGCATCCGATACGGGTTGCGCCGGGCCGCTATTCGGTGCCGCTGTCGGCGGCGATAGCGGGCCGTTACGCCGTCTCG GCCGAATTCGTGCGCCGTGGTGGCGGCGTGCAGACGGTGCGTCTGCCGGGCGCGCTCACGGTGCGCGGCGGCAGACCCGC GACGCCCGCGCCCTTCGACGGGCCGGGCATGCGCATGATGAACGGACTGCACGTGCACGTCAGCGCGGCCGGTCTGCGGG CCGGCCGGCCGACGACGCTGTCCGCGACCATCGGATCCGAGCCGGTGCTGCAACCGTGGCTGGGCATGCTCGGTCATCTG GTGGTCGCCGGCCCGATTCCACGTATGGCTTCCGCCACCGACCTCGGCACGGCGGTGCAGGATTCGGCGATCTGGGCGCA CGCACATTCCATGGGCGGGCACGGCGCAACCGGGATGCCGGGCATGGAGCACAGCGCCAATCACCAGTCCGCGCAAGATG ATCCGATGCCGCCCATGGTAGGCGTTCCCCCGCTCAACGGGGACAGCCCGCCCGATGAGACGGTCGCCGCCTTCGGCCCC GACGTCCCTTTCACCTTTACCTTCCCCAAGCCGGGCCGATACCTCGCCTGGATTCAGGCCCAGCGCGACTATCGGGTGCT GACCATCCCGGTGCGGCTGGACATCTCATGA
Upstream 100 bases:
>100_bases TCCCACCAACTCAGGATGCCGATCACGCTGTCGCTGTTCACGCGGCCAGTTTAGGCGGACCGCGTCGCGCCCCTGTCGGC GCAGGGCAGACTGGACTCCG
Downstream 100 bases:
>100_bases CCCGCCGCGTATGGGCCGGTCTCGCGATTATCGTCGCCGCGGTGCTGGCACTGACCTGGATCGCCTGGCCCAGCCCGCGC AAGGCCGTCACCCTGTACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MTGLHTKCLFLVLALFTLFSGTPVALADSASAGADVQVAQSLGERELTVVARRVTSIPGPLYVDVITHQGAPAGPLRVQL VPTGADTDEHEPAPGVPTSTEMVVLGDKPGPYSTTLDVDRPGPADLTISDGVHISRIPLVLTGQAMSPPERVAYVGLATT GLLLVISLVVATRVRRGVWIALPVTATVAALAVAITGAVLSTSAPPPPEPGPQRDPTVDNAANPYRLDRPAVTDYSRPSA MLVAEQPELDPGHATDIYFSLIDTATGLPADDLVIHDSALIHLLVVAPDGQLSHLHPIRVAPGRYSVPLSAAIAGRYAVS AEFVRRGGGVQTVRLPGALTVRGGRPATPAPFDGPGMRMMNGLHVHVSAAGLRAGRPTTLSATIGSEPVLQPWLGMLGHL VVAGPIPRMASATDLGTAVQDSAIWAHAHSMGGHGATGMPGMEHSANHQSAQDDPMPPMVGVPPLNGDSPPDETVAAFGP DVPFTFTFPKPGRYLAWIQAQRDYRVLTIPVRLDIS
Sequences:
>Translated_516_residues MTGLHTKCLFLVLALFTLFSGTPVALADSASAGADVQVAQSLGERELTVVARRVTSIPGPLYVDVITHQGAPAGPLRVQL VPTGADTDEHEPAPGVPTSTEMVVLGDKPGPYSTTLDVDRPGPADLTISDGVHISRIPLVLTGQAMSPPERVAYVGLATT GLLLVISLVVATRVRRGVWIALPVTATVAALAVAITGAVLSTSAPPPPEPGPQRDPTVDNAANPYRLDRPAVTDYSRPSA MLVAEQPELDPGHATDIYFSLIDTATGLPADDLVIHDSALIHLLVVAPDGQLSHLHPIRVAPGRYSVPLSAAIAGRYAVS AEFVRRGGGVQTVRLPGALTVRGGRPATPAPFDGPGMRMMNGLHVHVSAAGLRAGRPTTLSATIGSEPVLQPWLGMLGHL VVAGPIPRMASATDLGTAVQDSAIWAHAHSMGGHGATGMPGMEHSANHQSAQDDPMPPMVGVPPLNGDSPPDETVAAFGP DVPFTFTFPKPGRYLAWIQAQRDYRVLTIPVRLDIS >Mature_515_residues TGLHTKCLFLVLALFTLFSGTPVALADSASAGADVQVAQSLGERELTVVARRVTSIPGPLYVDVITHQGAPAGPLRVQLV PTGADTDEHEPAPGVPTSTEMVVLGDKPGPYSTTLDVDRPGPADLTISDGVHISRIPLVLTGQAMSPPERVAYVGLATTG LLLVISLVVATRVRRGVWIALPVTATVAALAVAITGAVLSTSAPPPPEPGPQRDPTVDNAANPYRLDRPAVTDYSRPSAM LVAEQPELDPGHATDIYFSLIDTATGLPADDLVIHDSALIHLLVVAPDGQLSHLHPIRVAPGRYSVPLSAAIAGRYAVSA EFVRRGGGVQTVRLPGALTVRGGRPATPAPFDGPGMRMMNGLHVHVSAAGLRAGRPTTLSATIGSEPVLQPWLGMLGHLV VAGPIPRMASATDLGTAVQDSAIWAHAHSMGGHGATGMPGMEHSANHQSAQDDPMPPMVGVPPLNGDSPPDETVAAFGPD VPFTFTFPKPGRYLAWIQAQRDYRVLTIPVRLDIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53717; Mature: 53586
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLHTKCLFLVLALFTLFSGTPVALADSASAGADVQVAQSLGERELTVVARRVTSIPGP CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCC LYVDVITHQGAPAGPLRVQLVPTGADTDEHEPAPGVPTSTEMVVLGDKPGPYSTTLDVDR EEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCC PGPADLTISDGVHISRIPLVLTGQAMSPPERVAYVGLATTGLLLVISLVVATRVRRGVWI CCCCCEEECCCEEEEECCEEEECCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHCCEEE ALPVTATVAALAVAITGAVLSTSAPPPPEPGPQRDPTVDNAANPYRLDRPAVTDYSRPSA EEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCE MLVAEQPELDPGHATDIYFSLIDTATGLPADDLVIHDSALIHLLVVAPDGQLSHLHPIRV EEEECCCCCCCCCCHHHHEEEHHHHCCCCCCCEEEECCEEEEEEEECCCCCCCCCCCEEE APGRYSVPLSAAIAGRYAVSAEFVRRGGGVQTVRLPGALTVRGGRPATPAPFDGPGMRMM CCCCCCCCHHHHHHCCHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCCCCCCCCHHHH NGLHVHVSAAGLRAGRPTTLSATIGSEPVLQPWLGMLGHLVVAGPIPRMASATDLGTAVQ CCEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCCHHH DSAIWAHAHSMGGHGATGMPGMEHSANHQSAQDDPMPPMVGVPPLNGDSPPDETVAAFGP CCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHCCC DVPFTFTFPKPGRYLAWIQAQRDYRVLTIPVRLDIS CCCEEEECCCCCCEEEEEEECCCCEEEEEEEEEECC >Mature Secondary Structure TGLHTKCLFLVLALFTLFSGTPVALADSASAGADVQVAQSLGERELTVVARRVTSIPGP CCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCC LYVDVITHQGAPAGPLRVQLVPTGADTDEHEPAPGVPTSTEMVVLGDKPGPYSTTLDVDR EEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCC PGPADLTISDGVHISRIPLVLTGQAMSPPERVAYVGLATTGLLLVISLVVATRVRRGVWI CCCCCEEECCCEEEEECCEEEECCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHCCEEE ALPVTATVAALAVAITGAVLSTSAPPPPEPGPQRDPTVDNAANPYRLDRPAVTDYSRPSA EEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCE MLVAEQPELDPGHATDIYFSLIDTATGLPADDLVIHDSALIHLLVVAPDGQLSHLHPIRV EEEECCCCCCCCCCHHHHEEEHHHHCCCCCCCEEEECCEEEEEEEECCCCCCCCCCCEEE APGRYSVPLSAAIAGRYAVSAEFVRRGGGVQTVRLPGALTVRGGRPATPAPFDGPGMRMM CCCCCCCCHHHHHHCCHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCCCCCCCCHHHH NGLHVHVSAAGLRAGRPTTLSATIGSEPVLQPWLGMLGHLVVAGPIPRMASATDLGTAVQ CCEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCCHHH DSAIWAHAHSMGGHGATGMPGMEHSANHQSAQDDPMPPMVGVPPLNGDSPPDETVAAFGP CCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHCCC DVPFTFTFPKPGRYLAWIQAQRDYRVLTIPVRLDIS CCCEEEECCCCCCEEEEEEECCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA