| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628719
Identifier: 169628719
GI number: 169628719
Start: 1658833
End: 1660158
Strand: Reverse
Name: 169628719
Synonym: MAB_1629c
Alternate gene names: NA
Gene position: 1660158-1658833 (Counterclockwise)
Preceding gene: 169628720
Following gene: 169628718
Centisome position: 32.76
GC content: 67.35
Gene sequence:
>1326_bases ATGACGGGCGATCGGACGACGACCGTTCTGGCCCATGGGCTGGGCGGCTCGGCCGATCTTCCGATCCCGTACACCTACGC ACTGATCGGCGCGGCGTGGGCGCTCACGTTCACCTTTGCGGTAGTGGCGCTGGCATGGAGGAAGCCCCGATTCGACACGA ACCGAACGGGGCGACCACTGCCCTGCTGGGTTACCGCGATTGTCGACGCACCTGCCGCGCGCGGGGCGGTCACCGCAGTC GTACTGGCCGCGACCGCATGGATCACCGTCGCCGCAGTGCTCGGCCCACAGGACGGCAGGAACGCATTGCCGGGAGTCTT CTATGTTCTGCTCTGGGTGGGCGTGGTGGCGGCGTCGCTGCTGTGCGGGCCGGTATGGCGGGTGTTGTCACCCGTGCGTG CCGCGTACCGTCTGCTGCCGCTGGCGCGGCGGCCGCCCCCCGTGGCATACCCGCGACGCTGGGGCTATTGGCCCGCTGCC GCAGGACTGTACCTGTTCGTCTGGCTGGAGCTAGCCAGCGCTGATCCAGGATCTCTTGGCGCGGTGAAGATCTGGCTGCT GGGGTATCTATGCGTCACCATGGCGGGCGCACTGGCCTGCGGCACACGCTGGTGCGCGCAGGCCGATCCGTTCGAGGTGT ACAGCATGGTGGCCTCGCGGCTGTCGCCCTTGCGGCGCAACACCGATGGCCTTATCGCGTACGGCAATCCGTTCGATCAT CTACCGTCGCTGCCGATACGGCCGGGCATGGTGGCGGTGCTCGCGGTGTTGCTCGGTTCCACCGCGTTCGACAGTTTCTC GGCGATGCCGGAGTGGCGCGGACTCGTCGATGCGCTTGCCCAAGGATCGACGGTGGCATCGGTGGCCATCCGCACCGCCG GGCTGACGGTCTTCGTGATCGTGGTCGCGACAACGTTCTGCCTCGCGGCGCGCGCCACCGGCGGCGTGGACCGCGCCACC CGACGGAATCTGCCAGGGCTGTTGGCGCACTCCTTGATCCCCATCGTGATCGGCTACATATTCGCGCACTATCTGACCTA TCTGGTGGAGCGCGGACAGCAGACCGTGCTGCGGCTCGCGGATCCGCTCGGGCGCGGGTGGCTGGCCGATGTCGATGTCT CGTATGCCCTGTCCATGCACCCATCCGTGCTGGCGACACTCAAGGTGGGGTTCGTGTTGGCGGGCCACATCGCGGGGGTG GTCGCGGCGCATGACCAGGCGCTGAAGGTGCTGCCCAAGCAGCATCAGGTGACCGGGCAGCTGGCGATGATGCTGGTAAT GGTCGGTTACACCTTCACCGGGCTGTACCTGCTCTTCGGCGGCTGA
Upstream 100 bases:
>100_bases AGAGCGGCCAGACATTCCAGTTCACCGTGAATGTGCCCGGGAAGGTCGACGTGGAACTGCACAAACTGAAGAAGACCGTC GCCACCATCACCGTGCAGCC
Downstream 100 bases:
>100_bases CCACTCAAAAGTAATCCGAATCTAAGGTAATTCTAAGAAAATAAGGGATATCTAAGGGTAGGGTGCATCGGGACGAAAGG ATCAGCGATGACACCTCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MTGDRTTTVLAHGLGGSADLPIPYTYALIGAAWALTFTFAVVALAWRKPRFDTNRTGRPLPCWVTAIVDAPAARGAVTAV VLAATAWITVAAVLGPQDGRNALPGVFYVLLWVGVVAASLLCGPVWRVLSPVRAAYRLLPLARRPPPVAYPRRWGYWPAA AGLYLFVWLELASADPGSLGAVKIWLLGYLCVTMAGALACGTRWCAQADPFEVYSMVASRLSPLRRNTDGLIAYGNPFDH LPSLPIRPGMVAVLAVLLGSTAFDSFSAMPEWRGLVDALAQGSTVASVAIRTAGLTVFVIVVATTFCLAARATGGVDRAT RRNLPGLLAHSLIPIVIGYIFAHYLTYLVERGQQTVLRLADPLGRGWLADVDVSYALSMHPSVLATLKVGFVLAGHIAGV VAAHDQALKVLPKQHQVTGQLAMMLVMVGYTFTGLYLLFGG
Sequences:
>Translated_441_residues MTGDRTTTVLAHGLGGSADLPIPYTYALIGAAWALTFTFAVVALAWRKPRFDTNRTGRPLPCWVTAIVDAPAARGAVTAV VLAATAWITVAAVLGPQDGRNALPGVFYVLLWVGVVAASLLCGPVWRVLSPVRAAYRLLPLARRPPPVAYPRRWGYWPAA AGLYLFVWLELASADPGSLGAVKIWLLGYLCVTMAGALACGTRWCAQADPFEVYSMVASRLSPLRRNTDGLIAYGNPFDH LPSLPIRPGMVAVLAVLLGSTAFDSFSAMPEWRGLVDALAQGSTVASVAIRTAGLTVFVIVVATTFCLAARATGGVDRAT RRNLPGLLAHSLIPIVIGYIFAHYLTYLVERGQQTVLRLADPLGRGWLADVDVSYALSMHPSVLATLKVGFVLAGHIAGV VAAHDQALKVLPKQHQVTGQLAMMLVMVGYTFTGLYLLFGG >Mature_440_residues TGDRTTTVLAHGLGGSADLPIPYTYALIGAAWALTFTFAVVALAWRKPRFDTNRTGRPLPCWVTAIVDAPAARGAVTAVV LAATAWITVAAVLGPQDGRNALPGVFYVLLWVGVVAASLLCGPVWRVLSPVRAAYRLLPLARRPPPVAYPRRWGYWPAAA GLYLFVWLELASADPGSLGAVKIWLLGYLCVTMAGALACGTRWCAQADPFEVYSMVASRLSPLRRNTDGLIAYGNPFDHL PSLPIRPGMVAVLAVLLGSTAFDSFSAMPEWRGLVDALAQGSTVASVAIRTAGLTVFVIVVATTFCLAARATGGVDRATR RNLPGLLAHSLIPIVIGYIFAHYLTYLVERGQQTVLRLADPLGRGWLADVDVSYALSMHPSVLATLKVGFVLAGHIAGVV AAHDQALKVLPKQHQVTGQLAMMLVMVGYTFTGLYLLFGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46929; Mature: 46797
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGDRTTTVLAHGLGGSADLPIPYTYALIGAAWALTFTFAVVALAWRKPRFDTNRTGRPL CCCCCCHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PCWVTAIVDAPAARGAVTAVVLAATAWITVAAVLGPQDGRNALPGVFYVLLWVGVVAASL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LCGPVWRVLSPVRAAYRLLPLARRPPPVAYPRRWGYWPAAAGLYLFVWLELASADPGSLG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH AVKIWLLGYLCVTMAGALACGTRWCAQADPFEVYSMVASRLSPLRRNTDGLIAYGNPFDH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH LPSLPIRPGMVAVLAVLLGSTAFDSFSAMPEWRGLVDALAQGSTVASVAIRTAGLTVFVI CCCCCCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VVATTFCLAARATGGVDRATRRNLPGLLAHSLIPIVIGYIFAHYLTYLVERGQQTVLRLA HHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH DPLGRGWLADVDVSYALSMHPSVLATLKVGFVLAGHIAGVVAAHDQALKVLPKQHQVTGQ HHCCCCCEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LAMMLVMVGYTFTGLYLLFGG HHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure TGDRTTTVLAHGLGGSADLPIPYTYALIGAAWALTFTFAVVALAWRKPRFDTNRTGRPL CCCCCHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PCWVTAIVDAPAARGAVTAVVLAATAWITVAAVLGPQDGRNALPGVFYVLLWVGVVAASL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LCGPVWRVLSPVRAAYRLLPLARRPPPVAYPRRWGYWPAAAGLYLFVWLELASADPGSLG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH AVKIWLLGYLCVTMAGALACGTRWCAQADPFEVYSMVASRLSPLRRNTDGLIAYGNPFDH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH LPSLPIRPGMVAVLAVLLGSTAFDSFSAMPEWRGLVDALAQGSTVASVAIRTAGLTVFVI CCCCCCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VVATTFCLAARATGGVDRATRRNLPGLLAHSLIPIVIGYIFAHYLTYLVERGQQTVLRLA HHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH DPLGRGWLADVDVSYALSMHPSVLATLKVGFVLAGHIAGVVAAHDQALKVLPKQHQVTGQ HHCCCCCEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LAMMLVMVGYTFTGLYLLFGG HHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA