| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is mcrA [C]
Identifier: 169628657
GI number: 169628657
Start: 1597890
End: 1598441
Strand: Direct
Name: mcrA [C]
Synonym: MAB_1567
Alternate gene names: 169628657
Gene position: 1597890-1598441 (Clockwise)
Preceding gene: 169628653
Following gene: 169628658
Centisome position: 31.53
GC content: 66.12
Gene sequence:
>552_bases ATGCCTCCGCAGCAGTCCAACGACGCCGGTTCCCTTTGGGGCCGGCGTCGCGTGTTATTGCTGAACTCCACGTATGAGCC ACTGACCGCGTTACCGATGCGTCGAGCGGTGATCATGCTGCTGTGCGGTAAGGCCGATGTGGTGCACGACGACCCCGCTG CCCCCATCATTCACTCCGCCACGACGTCGGTGGCGGTCCCTTCGGTGATCAGGCTGCGGACCTTCGTGCGGGTGCCGTAC CGGGCACGGGTGCCGATGACGCGCGCCGCGCTGATGCATCGCGACCGATTCCGGTGCGCCTACTGCGGCGGACGGGCCGA CACGATCGATCACGTGATTCCACGTAGCAAGGGCGGGGCGCACTCGTGGGAGAACTGCGTGGCGTGTTGTTCGTCCTGCA ACCATCGCAAGGCCGACCGGCTGTTGGCGGAGCTGGGCTGGTCGCTGCACACCACCCCGATGCCGCCCAAGGGGCAACAT TGGCGGCTGTTGTCGTCGGTCAAGGAACTGGACCCGGCATGGGTGCGATATCTAGGGGAGGGCGCGGCATGA
Upstream 100 bases:
>100_bases GCACCGGCATAACAGTGCCAGCGCTGGGCCGACCCAAAATGGGACGGCCCGAATACTGCACAGCGTTCCGGGAGTGCCTG AGAGCAGGATTCCTGGGGCG
Downstream 100 bases:
>100_bases CTTCCAGGTGCGGTCGGCTACGGTTTGCATCGTGAGCTTCCTCAACAGCCCCACGTATATCGGGATGCCGGTCTGGGTAG CCCTGATCACCCCGGTCGCC
Product: HNH endonuclease precursor
Products: NA
Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; HNH Endonuclease Domain-Containing Protein; Restriction Endonuclease; HNH Endonuclease Domain Protein; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MPPQQSNDAGSLWGRRRVLLLNSTYEPLTALPMRRAVIMLLCGKADVVHDDPAAPIIHSATTSVAVPSVIRLRTFVRVPY RARVPMTRAALMHRDRFRCAYCGGRADTIDHVIPRSKGGAHSWENCVACCSSCNHRKADRLLAELGWSLHTTPMPPKGQH WRLLSSVKELDPAWVRYLGEGAA
Sequences:
>Translated_183_residues MPPQQSNDAGSLWGRRRVLLLNSTYEPLTALPMRRAVIMLLCGKADVVHDDPAAPIIHSATTSVAVPSVIRLRTFVRVPY RARVPMTRAALMHRDRFRCAYCGGRADTIDHVIPRSKGGAHSWENCVACCSSCNHRKADRLLAELGWSLHTTPMPPKGQH WRLLSSVKELDPAWVRYLGEGAA >Mature_182_residues PPQQSNDAGSLWGRRRVLLLNSTYEPLTALPMRRAVIMLLCGKADVVHDDPAAPIIHSATTSVAVPSVIRLRTFVRVPYR ARVPMTRAALMHRDRFRCAYCGGRADTIDHVIPRSKGGAHSWENCVACCSSCNHRKADRLLAELGWSLHTTPMPPKGQHW RLLSSVKELDPAWVRYLGEGAA
Specific function: Restriction Of 5-Methyl And 5-Hydroxymethylcytosines At The Specific DNA Sequence C(Me)Cgg. [C]
COG id: COG1403
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.21.- [C]
Molecular weight: Translated: 20344; Mature: 20213
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPQQSNDAGSLWGRRRVLLLNSTYEPLTALPMRRAVIMLLCGKADVVHDDPAAPIIHSA CCCCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCC TTSVAVPSVIRLRTFVRVPYRARVPMTRAALMHRDRFRCAYCGGRADTIDHVIPRSKGGA HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHCCCCCCCC HSWENCVACCSSCNHRKADRLLAELGWSLHTTPMPPKGQHWRLLSSVKELDPAWVRYLGE CCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCC GAA CCC >Mature Secondary Structure PPQQSNDAGSLWGRRRVLLLNSTYEPLTALPMRRAVIMLLCGKADVVHDDPAAPIIHSA CCCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCC TTSVAVPSVIRLRTFVRVPYRARVPMTRAALMHRDRFRCAYCGGRADTIDHVIPRSKGGA HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHCCCCCCCC HSWENCVACCSSCNHRKADRLLAELGWSLHTTPMPPKGQHWRLLSSVKELDPAWVRYLGE CCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCC GAA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on ester bonds [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA