| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628640
Identifier: 169628640
GI number: 169628640
Start: 1574004
End: 1574657
Strand: Direct
Name: 169628640
Synonym: MAB_1550
Alternate gene names: NA
Gene position: 1574004-1574657 (Clockwise)
Preceding gene: 169628633
Following gene: 169628642
Centisome position: 31.06
GC content: 65.9
Gene sequence:
>654_bases GTGCGTGTCTGGAGCATGTTGGCTCTGATCTTCCTGGTCGCGGGTTGCGGAGCACAGCGCGAGCAGGCGCCGCGCACGTC GACGTCCACCAGCACCACCACGTCGCAGGCCGCGCCGGGCCCGCAGGCCTCGGTGGAATCGGTTACCCGCTGGATCGAGG CGGGCGATCCCGTCGACGCCGAAAAATATCGGACGATCGATCAAGGTGGCACGCCGGGCCGGCTAGCCGAAGGTGACGTG GCGTTCCGTGCGCCCCGCGAGCTCGGTCCTCGAGTCGTCGGCGGCTGCATCACCCAGGTGAAGTATCAGGACCCGTTGTC TTGCCTGCCGGGTCTTCGCAATGCGCAGCCCCGGCCGCCGGGTTTGCCCGGCCAGTGGATCGGAGGCTGGGTGAGCTTCG ACGGCGCCACGGTCACCGTCGGCAGCCTTCACGGTGACCCCGGGCCGTTCATCCAAGGGGTTGGCCTTCCGCTTGAGTAT GGCAAGCGTCTGAAATTCGGTGACTACCAATGCAGATCGGACCGGATGGGTCTGTATTGCGTCAACTACCCACATCGCTC GGCCATCCGGATGAGCGAGGAGCTTGAGGTGTACGGGTGCGCTCAACGGGCGACTCCGCCGCACGGTATCGGTATGCAGT ACGACTGCGGATGA
Upstream 100 bases:
>100_bases CCAGTTCCGCAGCGAGGCGGGCGTTTACAGATTTCACGGTCACGCTCTGAGTCACGCCGAGGGACCCTACCCAATATCGG GGACAAGCTAGGCTCACCGG
Downstream 100 bases:
>100_bases GTGTGATCAGCCGGCCGGTTTCGGCTTCAGCAGGGCTGCCGAGAAGCGATACAGGGCAAGTAGCGAGATGAAGCCAAACA TGAAAAGGATGACGCTGCCG
Product: lipoprotein LppI
Products: NA
Alternate protein names: LppI Protein
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MRVWSMLALIFLVAGCGAQREQAPRTSTSTSTTTSQAAPGPQASVESVTRWIEAGDPVDAEKYRTIDQGGTPGRLAEGDV AFRAPRELGPRVVGGCITQVKYQDPLSCLPGLRNAQPRPPGLPGQWIGGWVSFDGATVTVGSLHGDPGPFIQGVGLPLEY GKRLKFGDYQCRSDRMGLYCVNYPHRSAIRMSEELEVYGCAQRATPPHGIGMQYDCG
Sequences:
>Translated_217_residues MRVWSMLALIFLVAGCGAQREQAPRTSTSTSTTTSQAAPGPQASVESVTRWIEAGDPVDAEKYRTIDQGGTPGRLAEGDV AFRAPRELGPRVVGGCITQVKYQDPLSCLPGLRNAQPRPPGLPGQWIGGWVSFDGATVTVGSLHGDPGPFIQGVGLPLEY GKRLKFGDYQCRSDRMGLYCVNYPHRSAIRMSEELEVYGCAQRATPPHGIGMQYDCG >Mature_217_residues MRVWSMLALIFLVAGCGAQREQAPRTSTSTSTTTSQAAPGPQASVESVTRWIEAGDPVDAEKYRTIDQGGTPGRLAEGDV AFRAPRELGPRVVGGCITQVKYQDPLSCLPGLRNAQPRPPGLPGQWIGGWVSFDGATVTVGSLHGDPGPFIQGVGLPLEY GKRLKFGDYQCRSDRMGLYCVNYPHRSAIRMSEELEVYGCAQRATPPHGIGMQYDCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23342; Mature: 23342
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVWSMLALIFLVAGCGAQREQAPRTSTSTSTTTSQAAPGPQASVESVTRWIEAGDPVDA CHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCH EKYRTIDQGGTPGRLAEGDVAFRAPRELGPRVVGGCITQVKYQDPLSCLPGLRNAQPRPP HHHHHCCCCCCCCCCCCCCEEEECHHHHCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCC GLPGQWIGGWVSFDGATVTVGSLHGDPGPFIQGVGLPLEYGKRLKFGDYQCRSDRMGLYC CCCCCCCCEEEEECCCEEEEECCCCCCCCCEECCCCCHHHCCCCCCCCCEECCCCCCEEE VNYPHRSAIRMSEELEVYGCAQRATPPHGIGMQYDCG ECCCCHHHHHHHHHHHEEECCCCCCCCCCCCCEECCC >Mature Secondary Structure MRVWSMLALIFLVAGCGAQREQAPRTSTSTSTTTSQAAPGPQASVESVTRWIEAGDPVDA CHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCH EKYRTIDQGGTPGRLAEGDVAFRAPRELGPRVVGGCITQVKYQDPLSCLPGLRNAQPRPP HHHHHCCCCCCCCCCCCCCEEEECHHHHCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCC GLPGQWIGGWVSFDGATVTVGSLHGDPGPFIQGVGLPLEYGKRLKFGDYQCRSDRMGLYC CCCCCCCCEEEEECCCEEEEECCCCCCCCCEECCCCCHHHCCCCCCCCCEECCCCCCEEE VNYPHRSAIRMSEELEVYGCAQRATPPHGIGMQYDCG ECCCCHHHHHHHHHHHEEECCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA