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The map label for this gene is 169628621

Identifier: 169628621

GI number: 169628621

Start: 1550391

End: 1551611

Strand: Direct

Name: 169628621

Synonym: MAB_1530

Alternate gene names: NA

Gene position: 1550391-1551611 (Clockwise)

Preceding gene: 169628618

Following gene: 169628624

Centisome position: 30.6

GC content: 61.83

Gene sequence:

>1221_bases
ATGACCCAGGGTCGTCCACGCCTGCACGCTGGCGCGCGTCGGCGGTGGGTTGCCACGCTTGCTCTGCCCGTTGTGGCAAT
GGCTGTGCTGGCTGGATGCGCCGGTGCCACCACGCAGGAACCCCCGAAAGTCATTGATAAGGCAACGCCTTACGCCGATC
TGCTGGTACCCAAGCTGGCGATGTCGGTTAAGGATGGAGCCGTAGGTGTGGCGGTTGACGCGCCGGTGACGGTGACGGCA
GGCGAAGGTGTGCTCGGCAGCGTCACCATGGTGAATTCCGATGGCAAAGAGATCGCCGGCGAGATCGGTCCCGATGGCGT
CACCTGGACCACCACCGAACCGCTCGGTTACGACAAGCAGTACACGATCAATGCCGATGCCCGTGGTCTAGGCGGTGTGG
CGCGGGCCAATGCGACATTCCGAACCCAGTCGCCCGACAACATGACGATGCCGTACGTGATGCCCGGTGATGGCGAGGTT
GTCGGCGTCGGTCAAACGGTAGCCATTCGGTTCGATGAAAACATTCCGAACCGTGCGGCGGCCGAGAAGGCCATCAAGAT
CACCACCAACCCGCCGGTGGAGGGCGCGTTCTACTGGCTGAACAACCGAGAGGTGCGCTGGCGCCCCGAGTCGTTCTGGG
ACTCCGGTACATCCGTGGACGTCAAGGTCAATACCTATGGCGTGAACCTGGGCGACGGTGTCTTCGGCCAGGACAATGTG
GCGTCCCACTTCACCATCGGCGACGCGGTGATCAGCCGCGTGGACGACACCAACAAGATCCTCAACATCGAGCGCAACGG
CGAGATCATCAAGACCATGCCCACCTCGATGGGTAAGGACAAGGCGCCCACCAACAACGGCACCTACATCATCGGTGAGC
GGTTCAAGGATCTGATCATGGATTCGTCGACCTACGGTGTCGCGGTCAACTCGCCCGACGGCTACCGCACCAAGGTGCAG
TACGCCACCCAGATGTCGTACAGCGGTATTTACGTGCACGCGGCACCGTGGTCCGTAGGCGCGCAAGGGCGCACCAACAC
CAGCCACGGCTGCTTGAACGTCAGCACGGCCAACGCAAAATGGTTCTACGAGAACACTAAACGCGGCGATGTGGTGATCG
TCTCCAACACAGTGGGTCCGGTGCTTCCGGGTACCGAGGGTTTGGGCGACTGGAACATCCCTTGGGCGCAGTGGAAGGCG
GGAAACGCCCGCCAGCAATAA

Upstream 100 bases:

>100_bases
TGGCGATAGGCCCGTCGCGTTGGTTGAGGTCGTCGTGCGTCATCGCGAACCCGTACAATCGTGGCTGATTTCGTGCATCA
AAATTCAAAGGGAGCAAAGC

Downstream 100 bases:

>100_bases
AGCGGCACACAGACAGCGAAGAAGCCCCCGGCACTTTCACGTGCGCGGGGGCTTCTCCATCTGTGGGGCCTACCCCTCGA
TGACCTTCTGGTCGAGGACC

Product: lipoprotein LppS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MTQGRPRLHAGARRRWVATLALPVVAMAVLAGCAGATTQEPPKVIDKATPYADLLVPKLAMSVKDGAVGVAVDAPVTVTA
GEGVLGSVTMVNSDGKEIAGEIGPDGVTWTTTEPLGYDKQYTINADARGLGGVARANATFRTQSPDNMTMPYVMPGDGEV
VGVGQTVAIRFDENIPNRAAAEKAIKITTNPPVEGAFYWLNNREVRWRPESFWDSGTSVDVKVNTYGVNLGDGVFGQDNV
ASHFTIGDAVISRVDDTNKILNIERNGEIIKTMPTSMGKDKAPTNNGTYIIGERFKDLIMDSSTYGVAVNSPDGYRTKVQ
YATQMSYSGIYVHAAPWSVGAQGRTNTSHGCLNVSTANAKWFYENTKRGDVVIVSNTVGPVLPGTEGLGDWNIPWAQWKA
GNARQQ

Sequences:

>Translated_406_residues
MTQGRPRLHAGARRRWVATLALPVVAMAVLAGCAGATTQEPPKVIDKATPYADLLVPKLAMSVKDGAVGVAVDAPVTVTA
GEGVLGSVTMVNSDGKEIAGEIGPDGVTWTTTEPLGYDKQYTINADARGLGGVARANATFRTQSPDNMTMPYVMPGDGEV
VGVGQTVAIRFDENIPNRAAAEKAIKITTNPPVEGAFYWLNNREVRWRPESFWDSGTSVDVKVNTYGVNLGDGVFGQDNV
ASHFTIGDAVISRVDDTNKILNIERNGEIIKTMPTSMGKDKAPTNNGTYIIGERFKDLIMDSSTYGVAVNSPDGYRTKVQ
YATQMSYSGIYVHAAPWSVGAQGRTNTSHGCLNVSTANAKWFYENTKRGDVVIVSNTVGPVLPGTEGLGDWNIPWAQWKA
GNARQQ
>Mature_405_residues
TQGRPRLHAGARRRWVATLALPVVAMAVLAGCAGATTQEPPKVIDKATPYADLLVPKLAMSVKDGAVGVAVDAPVTVTAG
EGVLGSVTMVNSDGKEIAGEIGPDGVTWTTTEPLGYDKQYTINADARGLGGVARANATFRTQSPDNMTMPYVMPGDGEVV
GVGQTVAIRFDENIPNRAAAEKAIKITTNPPVEGAFYWLNNREVRWRPESFWDSGTSVDVKVNTYGVNLGDGVFGQDNVA
SHFTIGDAVISRVDDTNKILNIERNGEIIKTMPTSMGKDKAPTNNGTYIIGERFKDLIMDSSTYGVAVNSPDGYRTKVQY
ATQMSYSGIYVHAAPWSVGAQGRTNTSHGCLNVSTANAKWFYENTKRGDVVIVSNTVGPVLPGTEGLGDWNIPWAQWKAG
NARQQ

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 43428; Mature: 43297

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQGRPRLHAGARRRWVATLALPVVAMAVLAGCAGATTQEPPKVIDKATPYADLLVPKLA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHH
MSVKDGAVGVAVDAPVTVTAGEGVLGSVTMVNSDGKEIAGEIGPDGVTWTTTEPLGYDKQ
HEECCCCEEEEECCCEEEEECCCCEEEEEEECCCCHHHHHCCCCCCEEEEECCCCCCCCE
YTINADARGLGGVARANATFRTQSPDNMTMPYVMPGDGEVVGVGQTVAIRFDENIPNRAA
EEECCCCCCCCCEEECCCEEEECCCCCCCCCEEECCCCCEEECCCEEEEEECCCCCCCHH
AEKAIKITTNPPVEGAFYWLNNREVRWRPESFWDSGTSVDVKVNTYGVNLGDGVFGQDNV
CCCEEEEECCCCCCEEEEEECCCEEEECCHHHCCCCCEEEEEEEEEEEECCCCCCCCCCC
ASHFTIGDAVISRVDDTNKILNIERNGEIIKTMPTSMGKDKAPTNNGTYIIGERFKDLIM
CCEEEEHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEECCHHHHHHH
DSSTYGVAVNSPDGYRTKVQYATQMSYSGIYVHAAPWSVGAQGRTNTSHGCLNVSTANAK
CCCCCEEEEECCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCE
WFYENTKRGDVVIVSNTVGPVLPGTEGLGDWNIPWAQWKAGNARQQ
EEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC
>Mature Secondary Structure 
TQGRPRLHAGARRRWVATLALPVVAMAVLAGCAGATTQEPPKVIDKATPYADLLVPKLA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHH
MSVKDGAVGVAVDAPVTVTAGEGVLGSVTMVNSDGKEIAGEIGPDGVTWTTTEPLGYDKQ
HEECCCCEEEEECCCEEEEECCCCEEEEEEECCCCHHHHHCCCCCCEEEEECCCCCCCCE
YTINADARGLGGVARANATFRTQSPDNMTMPYVMPGDGEVVGVGQTVAIRFDENIPNRAA
EEECCCCCCCCCEEECCCEEEECCCCCCCCCEEECCCCCEEECCCEEEEEECCCCCCCHH
AEKAIKITTNPPVEGAFYWLNNREVRWRPESFWDSGTSVDVKVNTYGVNLGDGVFGQDNV
CCCEEEEECCCCCCEEEEEECCCEEEECCHHHCCCCCEEEEEEEEEEEECCCCCCCCCCC
ASHFTIGDAVISRVDDTNKILNIERNGEIIKTMPTSMGKDKAPTNNGTYIIGERFKDLIM
CCEEEEHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEECCHHHHHHH
DSSTYGVAVNSPDGYRTKVQYATQMSYSGIYVHAAPWSVGAQGRTNTSHGCLNVSTANAK
CCCCCEEEEECCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCE
WFYENTKRGDVVIVSNTVGPVLPGTEGLGDWNIPWAQWKAGNARQQ
EEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]