BacMap

Definition	Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession	NC_010397
Length	5,067,172

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The map label for this gene is yqjQ [H]

Identifier: 169628617

GI number: 169628617

Start: 1546156

End: 1547013

Strand: Direct

Name: yqjQ [H]

Synonym: MAB_1526

Alternate gene names: 169628617

Gene position: 1546156-1547013 (Clockwise)

Preceding gene: 169628613

Following gene: 169628618

Centisome position: 30.51

GC content: 65.97

Gene sequence:

>858_bases
GTGAGTCGTTATCCGAAGATCGAGCTGGCCGGTGCGGTGGTCGTCATCACCGGCGGAGCCAGAGGAATCGGCGCGGCGAC
CGCGCGCCTCTTCGCCGATAGGGGTGCTGACGTGTGGATCGGCGACGTCGACGACGTGGTCGCCAAGGAGACTGCGAACG
GCATCCCCAATGCACACTCCGGAGCCCTCGACGTCACCAAACCCGAGTCCTGGGCCGGGTTCCTTGACCAGGTGCGCGCT
GAATCCGGGCCGGTGGACATCTTGATCAACAACGCCGGCGTCATGCCACTGGGCGGATTCATCGAAGAAAACGAGCGCAC
CACCGACTTGATTCTCGACGTGAACGTGCGTGGCCCGCTCAACGGTGCACGGGCGGTGTTACCGCAGATGGTGGCCCGTG
GGCGCGGGCACGTCGTCAACGTGGCCTCGATGGCCGGCAAGCTGGCCGTGCCCGGAATGGTCACCTACAACGCGTCCAAG
TTCGGCGCCGTGGGGCTGTCGGTGGCGCTGCGCAAGGAGTACGGAAATACCGGTGTCAGTGTCAGCTGCGTGCTGCCGAG
CGCGGTCCGGACCGAATTGGCCTCGGGTGCGCCGCTGGGCAAGGGCATGCCCACCGTTGATCCCGAGGATGTGGCCGCCG
CCATCGTGCGCAGCGTGGACACTCGCCGCGCTCAGATTTCGGTGCCGGGCTGGCTCGCCTTCGGATGGGGTTTGGTGGAC
CTGTTTGTGCCGGAACCGGTGGAGCGGCTGGCTCGGCGGCTGATCGATGACCGTCGCGCCCTGACGTCACTGGACCTGAA
CGCGCGCGGTGCCTACATCGAACGCATTGAACGGCAGAGCAAGGAGCATCAGAAGTGA

Upstream 100 bases:

>100_bases
GCTGGACGACATAAGCGGCGATCCTACCGACCTTGACACCCCTCAAGAATGACATATCATTCCGAAACTGACACGCCATT
CCGTTTTCCTGGAGGTAGAT

Downstream 100 bases:

>100_bases
GCGATACGCGCGATCCCAGGGTCATCGTCGTCGGCGCGGGCATGGCGGGAATCGCCGTGGGGCACAAGCTCAAAGAGGCA
GGTTTCAACGATTTCACCAT

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSRYPKIELAGAVVVITGGARGIGAATARLFADRGADVWIGDVDDVVAKETANGIPNAHSGALDVTKPESWAGFLDQVRA
ESGPVDILINNAGVMPLGGFIEENERTTDLILDVNVRGPLNGARAVLPQMVARGRGHVVNVASMAGKLAVPGMVTYNASK
FGAVGLSVALRKEYGNTGVSVSCVLPSAVRTELASGAPLGKGMPTVDPEDVAAAIVRSVDTRRAQISVPGWLAFGWGLVD
LFVPEPVERLARRLIDDRRALTSLDLNARGAYIERIERQSKEHQK

Sequences:

>Translated_285_residues
MSRYPKIELAGAVVVITGGARGIGAATARLFADRGADVWIGDVDDVVAKETANGIPNAHSGALDVTKPESWAGFLDQVRA
ESGPVDILINNAGVMPLGGFIEENERTTDLILDVNVRGPLNGARAVLPQMVARGRGHVVNVASMAGKLAVPGMVTYNASK
FGAVGLSVALRKEYGNTGVSVSCVLPSAVRTELASGAPLGKGMPTVDPEDVAAAIVRSVDTRRAQISVPGWLAFGWGLVD
LFVPEPVERLARRLIDDRRALTSLDLNARGAYIERIERQSKEHQK
>Mature_284_residues
SRYPKIELAGAVVVITGGARGIGAATARLFADRGADVWIGDVDDVVAKETANGIPNAHSGALDVTKPESWAGFLDQVRAE
SGPVDILINNAGVMPLGGFIEENERTTDLILDVNVRGPLNGARAVLPQMVARGRGHVVNVASMAGKLAVPGMVTYNASKF
GAVGLSVALRKEYGNTGVSVSCVLPSAVRTELASGAPLGKGMPTVDPEDVAAAIVRSVDTRRAQISVPGWLAFGWGLVDL
FVPEPVERLARRLIDDRRALTSLDLNARGAYIERIERQSKEHQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI210032110, Length=253, Percent_Identity=30.4347826086957, Blast_Score=124, Evalue=8e-29,
Organism=Homo sapiens, GI142976729, Length=233, Percent_Identity=32.1888412017167, Blast_Score=122, Evalue=3e-28,
Organism=Homo sapiens, GI40807363, Length=240, Percent_Identity=30, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI210032112, Length=249, Percent_Identity=27.3092369477912, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI20149619, Length=207, Percent_Identity=28.0193236714976, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI32483357, Length=192, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI25282469, Length=257, Percent_Identity=28.0155642023346, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI109715829, Length=234, Percent_Identity=27.7777777777778, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI5031737, Length=192, Percent_Identity=35.4166666666667, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI33667109, Length=192, Percent_Identity=35.4166666666667, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI310128830, Length=259, Percent_Identity=26.6409266409266, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI310115468, Length=259, Percent_Identity=26.6409266409266, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI15277342, Length=234, Percent_Identity=29.0598290598291, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI157739938, Length=264, Percent_Identity=28.030303030303, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI66933014, Length=186, Percent_Identity=31.7204301075269, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI4503817, Length=232, Percent_Identity=28.448275862069, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=32.967032967033, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI40254992, Length=216, Percent_Identity=30.5555555555556, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI7706318, Length=213, Percent_Identity=27.2300469483568, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI31543615, Length=228, Percent_Identity=28.0701754385965, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI32455239, Length=258, Percent_Identity=29.0697674418605, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI5031765, Length=258, Percent_Identity=29.0697674418605, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI22507405, Length=196, Percent_Identity=33.6734693877551, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI40548397, Length=200, Percent_Identity=31.5, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI214010158, Length=200, Percent_Identity=31.5, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI214010156, Length=200, Percent_Identity=31.5, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI22758144, Length=200, Percent_Identity=31.5, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI302344755, Length=103, Percent_Identity=38.8349514563107, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI186928839, Length=214, Percent_Identity=32.7102803738318, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI166795268, Length=218, Percent_Identity=30.2752293577982, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI19743808, Length=190, Percent_Identity=33.1578947368421, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI150247226, Length=204, Percent_Identity=31.8627450980392, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI7705925, Length=194, Percent_Identity=29.8969072164948, Blast_Score=65, Evalue=1e-10,
Organism=Escherichia coli, GI87082100, Length=220, Percent_Identity=33.6363636363636, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1787335, Length=188, Percent_Identity=29.7872340425532, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1790717, Length=244, Percent_Identity=28.6885245901639, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI2367175, Length=225, Percent_Identity=31.1111111111111, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI2367365, Length=189, Percent_Identity=32.8042328042328, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1789208, Length=193, Percent_Identity=29.0155440414508, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1787820, Length=218, Percent_Identity=30.2752293577982, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1786812, Length=187, Percent_Identity=28.8770053475936, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1788459, Length=187, Percent_Identity=29.4117647058824, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786701, Length=185, Percent_Identity=30.8108108108108, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI87082160, Length=194, Percent_Identity=23.7113402061856, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17508895, Length=247, Percent_Identity=31.5789473684211, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI193203117, Length=233, Percent_Identity=30.9012875536481, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI193203115, Length=229, Percent_Identity=31.0043668122271, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17564282, Length=237, Percent_Identity=31.2236286919831, Blast_Score=101, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17567345, Length=232, Percent_Identity=28.8793103448276, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17555706, Length=218, Percent_Identity=28.4403669724771, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI25147288, Length=207, Percent_Identity=29.951690821256, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17561402, Length=193, Percent_Identity=25.9067357512953, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI212646214, Length=194, Percent_Identity=30.9278350515464, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI115534660, Length=186, Percent_Identity=32.7956989247312, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=194, Percent_Identity=29.8969072164948, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=188, Percent_Identity=29.2553191489362, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17538182, Length=200, Percent_Identity=31, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17560676, Length=192, Percent_Identity=27.6041666666667, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI25152911, Length=199, Percent_Identity=31.1557788944724, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17557668, Length=192, Percent_Identity=28.125, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17562908, Length=210, Percent_Identity=29.0476190476191, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17568967, Length=197, Percent_Identity=27.9187817258883, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=201, Percent_Identity=34.8258706467662, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6322861, Length=191, Percent_Identity=32.9842931937173, Blast_Score=87, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6323458, Length=253, Percent_Identity=26.4822134387352, Blast_Score=70, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6320089, Length=253, Percent_Identity=22.9249011857708, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221510726, Length=251, Percent_Identity=30.2788844621514, Blast_Score=108, Evalue=3e-24,
Organism=Drosophila melanogaster, GI281364892, Length=240, Percent_Identity=27.0833333333333, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI21355631, Length=247, Percent_Identity=30.3643724696356, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24581726, Length=238, Percent_Identity=31.0924369747899, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21358495, Length=204, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24640492, Length=218, Percent_Identity=29.8165137614679, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24649181, Length=253, Percent_Identity=29.2490118577075, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI21355319, Length=192, Percent_Identity=32.2916666666667, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24639444, Length=225, Percent_Identity=30.2222222222222, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24644339, Length=193, Percent_Identity=30.5699481865285, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI21357041, Length=186, Percent_Identity=29.5698924731183, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI23397609, Length=189, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28571526, Length=187, Percent_Identity=30.4812834224599, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21356301, Length=235, Percent_Identity=28.936170212766, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI18859837, Length=197, Percent_Identity=28.9340101522843, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24641388, Length=227, Percent_Identity=30.8370044052863, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI116007236, Length=227, Percent_Identity=31.2775330396476, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21357673, Length=206, Percent_Identity=29.126213592233, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI22024069, Length=207, Percent_Identity=31.4009661835749, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007234, Length=228, Percent_Identity=29.3859649122807, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24648693, Length=227, Percent_Identity=28.1938325991189, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI21355889, Length=227, Percent_Identity=28.1938325991189, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24643142, Length=187, Percent_Identity=28.8770053475936, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI281364494, Length=230, Percent_Identity=26.5217391304348, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 30110; Mature: 29979

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRYPKIELAGAVVVITGGARGIGAATARLFADRGADVWIGDVDDVVAKETANGIPNAHS
CCCCCCEEECCEEEEEECCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCCC
GALDVTKPESWAGFLDQVRAESGPVDILINNAGVMPLGGFIEENERTTDLILDVNVRGPL
CCEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEECCCCCCEEEEEEEECCCCC
NGARAVLPQMVARGRGHVVNVASMAGKLAVPGMVTYNASKFGAVGLSVALRKEYGNTGVS
CHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCEEEECCCCCCHHHHHEEEEHHCCCCCCE
VSCVLPSAVRTELASGAPLGKGMPTVDPEDVAAAIVRSVDTRRAQISVPGWLAFGWGLVD
EEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHH
LFVPEPVERLARRLIDDRRALTSLDLNARGAYIERIERQSKEHQK
HCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRYPKIELAGAVVVITGGARGIGAATARLFADRGADVWIGDVDDVVAKETANGIPNAHS
CCCCCEEECCEEEEEECCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCCC
GALDVTKPESWAGFLDQVRAESGPVDILINNAGVMPLGGFIEENERTTDLILDVNVRGPL
CCEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEECCCCCCEEEEEEEECCCCC
NGARAVLPQMVARGRGHVVNVASMAGKLAVPGMVTYNASKFGAVGLSVALRKEYGNTGVS
CHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCEEEECCCCCCHHHHHEEEEHHCCCCCCE
VSCVLPSAVRTELASGAPLGKGMPTVDPEDVAAAIVRSVDTRRAQISVPGWLAFGWGLVD
EEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHH
LFVPEPVERLARRLIDDRRALTSLDLNARGAYIERIERQSKEHQK
HCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]