| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628459
Identifier: 169628459
GI number: 169628459
Start: 1365829
End: 1366779
Strand: Direct
Name: 169628459
Synonym: MAB_1368
Alternate gene names: NA
Gene position: 1365829-1366779 (Clockwise)
Preceding gene: 169628456
Following gene: 169628460
Centisome position: 26.95
GC content: 66.35
Gene sequence:
>951_bases ATGACCGCAGCACCGGATGTCGCCGTCCACTGGGAACTTGGCTCCGATCGGCCCCGCGAGGACCATGGCTTCTTCGGGCC CGATTCGCCGACGTGGAAGGTGTGGACCAGCCCCACAGCACTCATCGGATTCCAGCGCTCGGTGGTGCTGGAACATTTCG AACCGCACCTGGCCGCCGCGGTGGCCGACGCGGCCGGCATCTATCGGGATCCGCGTGGACGGATGGACGGGACCCTCGCC TACTTCCTGATCGTCGCGACAGCCGATTCGCGTACCGCCGTCGAGGCCTCCGAACACCTCCAAAAGGTGCACGCACGGTC CAAGGGCATCGATCCGGTCACCGGAACTCGCTACAGCGCCAACGATCCGGCATCTCAGCTGTGGATTCACGTCACCGGTT GGCATTCTGTGCTCAAGTGCTACGAGGTATTCGGCCCGGGACCGCTGAGCCGGGCCGAGGAGGACCGTTACTGGTCCGAG TGTGTGATCGCCGCCGAATTGCAGACCGTCAATCCCGCCGAGGTACCACGATCACGCGACGAGGTCCGTCAGTACTTCGC ACGGATGCGGCCCGCCTTGTGCACGTCCGAACGGGCCCAGCGGGCCATGCACTATCTGTTGCGCACCCCGCGGTCGGGCA GCAGCAATATGCAGTTCTGGGCGATCAGCCGACTGCTGGCACCCGCCACTATCGCGACGCTGCCGCGCTGGATGCGTGAG CTGGGGCAATTCGATCAGCCGGGCATTGTCGACGCCGCCTACCGCCCGCTGGTGTCCGCCGGTATGCGTATCGCAGGCAT TCCGGCGGTGGAGACCACGATTCTGCGGCGCAGCCTTCCGATGACGCGCACCGCACTGCGCGATTTCCACAAGGCCAAGG CGCCGCTGCGGCCCGTCACCGTCACGCCGGCCGAGGCCAAGGAGCGGTACGGGAGGCGAGCCACCGCATAG
Upstream 100 bases:
>100_bases AGAAATGGGCGGGTGGCTATCTCGCGCGGAAGGGCCTCGACATTGGCTGACTTACGGTCAGTATCTAGACGTAAACATAA TCAATTGATAGCGTTACAAC
Downstream 100 bases:
>100_bases GGCGGCGCCTACGCTGACTATCTGTGACAGCACCCGCGTACCGTCCACGCCGCACCACGCTGGCTGTGCCCGGCAGCAGC CAGAAGATGATCGACAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MTAAPDVAVHWELGSDRPREDHGFFGPDSPTWKVWTSPTALIGFQRSVVLEHFEPHLAAAVADAAGIYRDPRGRMDGTLA YFLIVATADSRTAVEASEHLQKVHARSKGIDPVTGTRYSANDPASQLWIHVTGWHSVLKCYEVFGPGPLSRAEEDRYWSE CVIAAELQTVNPAEVPRSRDEVRQYFARMRPALCTSERAQRAMHYLLRTPRSGSSNMQFWAISRLLAPATIATLPRWMRE LGQFDQPGIVDAAYRPLVSAGMRIAGIPAVETTILRRSLPMTRTALRDFHKAKAPLRPVTVTPAEAKERYGRRATA
Sequences:
>Translated_316_residues MTAAPDVAVHWELGSDRPREDHGFFGPDSPTWKVWTSPTALIGFQRSVVLEHFEPHLAAAVADAAGIYRDPRGRMDGTLA YFLIVATADSRTAVEASEHLQKVHARSKGIDPVTGTRYSANDPASQLWIHVTGWHSVLKCYEVFGPGPLSRAEEDRYWSE CVIAAELQTVNPAEVPRSRDEVRQYFARMRPALCTSERAQRAMHYLLRTPRSGSSNMQFWAISRLLAPATIATLPRWMRE LGQFDQPGIVDAAYRPLVSAGMRIAGIPAVETTILRRSLPMTRTALRDFHKAKAPLRPVTVTPAEAKERYGRRATA >Mature_315_residues TAAPDVAVHWELGSDRPREDHGFFGPDSPTWKVWTSPTALIGFQRSVVLEHFEPHLAAAVADAAGIYRDPRGRMDGTLAY FLIVATADSRTAVEASEHLQKVHARSKGIDPVTGTRYSANDPASQLWIHVTGWHSVLKCYEVFGPGPLSRAEEDRYWSEC VIAAELQTVNPAEVPRSRDEVRQYFARMRPALCTSERAQRAMHYLLRTPRSGSSNMQFWAISRLLAPATIATLPRWMREL GQFDQPGIVDAAYRPLVSAGMRIAGIPAVETTILRRSLPMTRTALRDFHKAKAPLRPVTVTPAEAKERYGRRATA
Specific function: Unknown
COG id: COG3662
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35226; Mature: 35095
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAPDVAVHWELGSDRPREDHGFFGPDSPTWKVWTSPTALIGFQRSVVLEHFEPHLAAA CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH VADAAGIYRDPRGRMDGTLAYFLIVATADSRTAVEASEHLQKVHARSKGIDPVTGTRYSA HHHHHHHCCCCCCCCCHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC NDPASQLWIHVTGWHSVLKCYEVFGPGPLSRAEEDRYWSECVIAAELQTVNPAEVPRSRD CCCCCEEEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCHH EVRQYFARMRPALCTSERAQRAMHYLLRTPRSGSSNMQFWAISRLLAPATIATLPRWMRE HHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGQFDQPGIVDAAYRPLVSAGMRIAGIPAVETTILRRSLPMTRTALRDFHKAKAPLRPVT HCCCCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEE VTPAEAKERYGRRATA ECCHHHHHHCCCCCCC >Mature Secondary Structure TAAPDVAVHWELGSDRPREDHGFFGPDSPTWKVWTSPTALIGFQRSVVLEHFEPHLAAA CCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH VADAAGIYRDPRGRMDGTLAYFLIVATADSRTAVEASEHLQKVHARSKGIDPVTGTRYSA HHHHHHHCCCCCCCCCHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC NDPASQLWIHVTGWHSVLKCYEVFGPGPLSRAEEDRYWSECVIAAELQTVNPAEVPRSRD CCCCCEEEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCHH EVRQYFARMRPALCTSERAQRAMHYLLRTPRSGSSNMQFWAISRLLAPATIATLPRWMRE HHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGQFDQPGIVDAAYRPLVSAGMRIAGIPAVETTILRRSLPMTRTALRDFHKAKAPLRPVT HCCCCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEE VTPAEAKERYGRRATA ECCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA