| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is mmpL3 [H]
Identifier: 169628380
GI number: 169628380
Start: 1291513
End: 1293726
Strand: Direct
Name: mmpL3 [H]
Synonym: MAB_1287
Alternate gene names: 169628380
Gene position: 1291513-1293726 (Clockwise)
Preceding gene: 169628375
Following gene: 169628381
Centisome position: 25.49
GC content: 63.28
Gene sequence:
>2214_bases ATGATGCTCGAACGTTTGGCTCGATCGGTGATCGCGGCGCCCCGCCTCGTTCTCGGGATGGCGCTGCTCATCGCGATCGC GGCGGCCCTCTTCGGCGTTCCGGTGACCAAGCATCTGGCCGCCGGTGGTCAGCAAGACCCGAACTCCGAATCTGCCTATG TGACCAAGGCTCTCCGAGACAAGTTTGATATCAGCGACCAGTCTCTGGTCTTCATGCTCACCAGCGAACAAGGCGTCAAG AGCCCGCAGATGCGTGCCGTCGCAGCAGATCTGGAGCGCCAGCTCAAAGACTCCGGCGTGGTCATCAACCTGACCTCGGC CTGGACGGCGCCGCCACAGGTAGCCGAGGAACTGCTGGGCGCCGATGGCAAGGCCGGATTGATCGTCGCCGGGCTGACCG GGGGCGAGAACGACGCGCAGAAGCACGCGGCAAAGCTCATCAAGTCTCTCGCGGTGGACCGTGACGGGGTAGCGGTCAAG GCCGGCGGTGTCGCCACGCTCTACAACCAGATCGTCACCCAGTCCGAGAAGGACCTGCTGGTTATGGAGTCGATCGCGAT TCCGATCAGCTTTGTGGTGTTGGTATGGATATTCGGCGGCCTCTACGCGGCCCTGTTGCCTCTCGTAGTCGGAGTGTTTT CCATCGTCGGCGCCATGTCGATATTGCGCGGGCTGACGTATGTCACCGATGTGTCCGTGTTCGCGCTGAACCTTGCGGTG GCAATGGGATTGGCGCTGGCGATCGACTACTCCCTGCTGATCATCAGTCGCTATCGCGAGGAGGTGAATGCGGGCAAACC GCGCGATGAAGCGCTGGTCCTGACCATGACCACGGCCGGACGGACCGTGCTGTTCTCGGCGCTGACGGTTGCGCTGGCCC TGGTAGCGCTGATCCTGTTCCCGATGTACTTCCTCAAATCGTTCGGATACGCCGGTGTAGCCGTCGTCTTCGTTGGCGCC ATCGCCGCGCTGGTCATCGTCCCGGCGGTAGTCACCCTGCTGGGCGACCGGATCGACGCCCTGGACGTGCGCCGCCTGAT CCGCAGGGTCCTGGGAAGGCCGGAACCCGTCGCCAAGGACGTCACGCAAAGCTTCTGGTACCGGACCACCAAAAGGGTTA TGGCGCGCGCTGTTCCGATTGCCATCATCATCGTCAGCGCATTGGTGGTGCTGGGCCTGCCGTTCCTCGACGGCAAGTTC GGATTCCCGGATGACCGGGTCTTGCCCGCCTCGGCCTCGGCGCATCAAGTCGGCAACGAGATGCGCCGCAACTTCAACAA CAACAGCTCCACCAACTTGTCCGTCATCGCCGAGGGCGTCGGTTCGGTGCCGCCGAGGGAGATCGACGAGTACGCCGCGG ACCTGTCGAATATCGAGGACGTCAAGGAGGTGGCCGCACCCACCGGTGCGTTCATCCGGGGCATGAAGGTGGGCCCGTCG GCAAGTGCAACCGGAATCAAGAATGACACAGCACTTTTCACGGTTCAGACCGCCGCCAAGCCGTACACGGAGGCCGCCGA GCGCCAGCTCGATGCCATCCACGCACTGCCGGGCCCGGCCGATGTCTTGGTCAGGATCGGCGGGGGAGCCCAGTTGGATC GTGACGCCGTCGACGGCATTGTGCACAAGCTGCCCCTGGTGCTGGCCATCATCGCCGTCGTCACCTTTGTGCTGCTATTT CTGCTAACGGGTTCGGTGGTACTGCCTATCAAAGCGTTGGTCCTCAACGTGCTGTCGTTGACGGCCACCTTCGGCGCGCT GATCTGGATCTTCCAGGAGGGACACCTGGGCGGGTTCGGCACCGAGGTCACCGGCACCATCGTCGCCACCATGCCGATGC TGTTGTTCTGCATAGCTTTTGGGCTATCAATGGACTATGAGGTGTTTCTCATCTCGCGCATCCGCGAGTACTGGATGGCC TCCGGGCGCACCCGGGCCGACAACGACGAGGCGGTGGCGCTCGGTGTGGCCCGCACCGGCCGGGTGGTCACCGCCGCGGC GCTGATCATGGCGATCGCCTTCGCGGCACTGATGGCTGCGCAGGTGTCCTTCATGCGGATGTTCGGTACCGGACTGACCA TCGCGATCCTGGTGGACGCCACCATCATCCGGATGCTGCTGGTGCCGTCGTTCATGCGGCTGCTGGGACGGTTCAACTGG TGGGCGCCCAAGCCGTTGGTCACGCTGCATGAACGGATCGGATTCAGTGACTAG
Upstream 100 bases:
>100_bases ATTTCTCTCACCACCTAAGCGGCGCATCCGCCTCAACCACCCTTGACCGTCTAACTTATCGCTGATAACTTAACGCCGTT ATTCTCCGGCGGAAGGCGCG
Downstream 100 bases:
>100_bases GCGGCAGCGCGCGTCCCGCGGCTCGGGCGATCGACTGCGCGACGAAATAATCGACGCCGCAATCGCTCTTGTTTTGGAGA CCAAGGAATTGCGTGCACCG
Product: MmpL family membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 737; Mature: 737
Protein sequence:
>737_residues MMLERLARSVIAAPRLVLGMALLIAIAAALFGVPVTKHLAAGGQQDPNSESAYVTKALRDKFDISDQSLVFMLTSEQGVK SPQMRAVAADLERQLKDSGVVINLTSAWTAPPQVAEELLGADGKAGLIVAGLTGGENDAQKHAAKLIKSLAVDRDGVAVK AGGVATLYNQIVTQSEKDLLVMESIAIPISFVVLVWIFGGLYAALLPLVVGVFSIVGAMSILRGLTYVTDVSVFALNLAV AMGLALAIDYSLLIISRYREEVNAGKPRDEALVLTMTTAGRTVLFSALTVALALVALILFPMYFLKSFGYAGVAVVFVGA IAALVIVPAVVTLLGDRIDALDVRRLIRRVLGRPEPVAKDVTQSFWYRTTKRVMARAVPIAIIIVSALVVLGLPFLDGKF GFPDDRVLPASASAHQVGNEMRRNFNNNSSTNLSVIAEGVGSVPPREIDEYAADLSNIEDVKEVAAPTGAFIRGMKVGPS ASATGIKNDTALFTVQTAAKPYTEAAERQLDAIHALPGPADVLVRIGGGAQLDRDAVDGIVHKLPLVLAIIAVVTFVLLF LLTGSVVLPIKALVLNVLSLTATFGALIWIFQEGHLGGFGTEVTGTIVATMPMLLFCIAFGLSMDYEVFLISRIREYWMA SGRTRADNDEAVALGVARTGRVVTAAALIMAIAFAALMAAQVSFMRMFGTGLTIAILVDATIIRMLLVPSFMRLLGRFNW WAPKPLVTLHERIGFSD
Sequences:
>Translated_737_residues MMLERLARSVIAAPRLVLGMALLIAIAAALFGVPVTKHLAAGGQQDPNSESAYVTKALRDKFDISDQSLVFMLTSEQGVK SPQMRAVAADLERQLKDSGVVINLTSAWTAPPQVAEELLGADGKAGLIVAGLTGGENDAQKHAAKLIKSLAVDRDGVAVK AGGVATLYNQIVTQSEKDLLVMESIAIPISFVVLVWIFGGLYAALLPLVVGVFSIVGAMSILRGLTYVTDVSVFALNLAV AMGLALAIDYSLLIISRYREEVNAGKPRDEALVLTMTTAGRTVLFSALTVALALVALILFPMYFLKSFGYAGVAVVFVGA IAALVIVPAVVTLLGDRIDALDVRRLIRRVLGRPEPVAKDVTQSFWYRTTKRVMARAVPIAIIIVSALVVLGLPFLDGKF GFPDDRVLPASASAHQVGNEMRRNFNNNSSTNLSVIAEGVGSVPPREIDEYAADLSNIEDVKEVAAPTGAFIRGMKVGPS ASATGIKNDTALFTVQTAAKPYTEAAERQLDAIHALPGPADVLVRIGGGAQLDRDAVDGIVHKLPLVLAIIAVVTFVLLF LLTGSVVLPIKALVLNVLSLTATFGALIWIFQEGHLGGFGTEVTGTIVATMPMLLFCIAFGLSMDYEVFLISRIREYWMA SGRTRADNDEAVALGVARTGRVVTAAALIMAIAFAALMAAQVSFMRMFGTGLTIAILVDATIIRMLLVPSFMRLLGRFNW WAPKPLVTLHERIGFSD >Mature_737_residues MMLERLARSVIAAPRLVLGMALLIAIAAALFGVPVTKHLAAGGQQDPNSESAYVTKALRDKFDISDQSLVFMLTSEQGVK SPQMRAVAADLERQLKDSGVVINLTSAWTAPPQVAEELLGADGKAGLIVAGLTGGENDAQKHAAKLIKSLAVDRDGVAVK AGGVATLYNQIVTQSEKDLLVMESIAIPISFVVLVWIFGGLYAALLPLVVGVFSIVGAMSILRGLTYVTDVSVFALNLAV AMGLALAIDYSLLIISRYREEVNAGKPRDEALVLTMTTAGRTVLFSALTVALALVALILFPMYFLKSFGYAGVAVVFVGA IAALVIVPAVVTLLGDRIDALDVRRLIRRVLGRPEPVAKDVTQSFWYRTTKRVMARAVPIAIIIVSALVVLGLPFLDGKF GFPDDRVLPASASAHQVGNEMRRNFNNNSSTNLSVIAEGVGSVPPREIDEYAADLSNIEDVKEVAAPTGAFIRGMKVGPS ASATGIKNDTALFTVQTAAKPYTEAAERQLDAIHALPGPADVLVRIGGGAQLDRDAVDGIVHKLPLVLAIIAVVTFVLLF LLTGSVVLPIKALVLNVLSLTATFGALIWIFQEGHLGGFGTEVTGTIVATMPMLLFCIAFGLSMDYEVFLISRIREYWMA SGRTRADNDEAVALGVARTGRVVTAAALIMAIAFAALMAAQVSFMRMFGTGLTIAILVDATIIRMLLVPSFMRLLGRFNW WAPKPLVTLHERIGFSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004869 - InterPro: IPR000731 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 78448; Mature: 78448
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLERLARSVIAAPRLVLGMALLIAIAAALFGVPVTKHLAAGGQQDPNSESAYVTKALRD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHH KFDISDQSLVFMLTSEQGVKSPQMRAVAADLERQLKDSGVVINLTSAWTAPPQVAEELLG HCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHC ADGKAGLIVAGLTGGENDAQKHAAKLIKSLAVDRDGVAVKAGGVATLYNQIVTQSEKDLL CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCCH VMESIAIPISFVVLVWIFGGLYAALLPLVVGVFSIVGAMSILRGLTYVTDVSVFALNLAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMGLALAIDYSLLIISRYREEVNAGKPRDEALVLTMTTAGRTVLFSALTVALALVALILF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH PMYFLKSFGYAGVAVVFVGAIAALVIVPAVVTLLGDRIDALDVRRLIRRVLGRPEPVAKD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHH VTQSFWYRTTKRVMARAVPIAIIIVSALVVLGLPFLDGKFGFPDDRVLPASASAHQVGNE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH MRRNFNNNSSTNLSVIAEGVGSVPPREIDEYAADLSNIEDVKEVAAPTGAFIRGMKVGPS HHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC ASATGIKNDTALFTVQTAAKPYTEAAERQLDAIHALPGPADVLVRIGGGAQLDRDAVDGI CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCHHHHHHH VHKLPLVLAIIAVVTFVLLFLLTGSVVLPIKALVLNVLSLTATFGALIWIFQEGHLGGFG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC TEVTGTIVATMPMLLFCIAFGLSMDYEVFLISRIREYWMASGRTRADNDEAVALGVARTG CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHCC RVVTAAALIMAIAFAALMAAQVSFMRMFGTGLTIAILVDATIIRMLLVPSFMRLLGRFNW HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC WAPKPLVTLHERIGFSD CCCCHHHHHHHHCCCCC >Mature Secondary Structure MMLERLARSVIAAPRLVLGMALLIAIAAALFGVPVTKHLAAGGQQDPNSESAYVTKALRD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHH KFDISDQSLVFMLTSEQGVKSPQMRAVAADLERQLKDSGVVINLTSAWTAPPQVAEELLG HCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHC ADGKAGLIVAGLTGGENDAQKHAAKLIKSLAVDRDGVAVKAGGVATLYNQIVTQSEKDLL CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCCH VMESIAIPISFVVLVWIFGGLYAALLPLVVGVFSIVGAMSILRGLTYVTDVSVFALNLAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMGLALAIDYSLLIISRYREEVNAGKPRDEALVLTMTTAGRTVLFSALTVALALVALILF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH PMYFLKSFGYAGVAVVFVGAIAALVIVPAVVTLLGDRIDALDVRRLIRRVLGRPEPVAKD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHH VTQSFWYRTTKRVMARAVPIAIIIVSALVVLGLPFLDGKFGFPDDRVLPASASAHQVGNE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH MRRNFNNNSSTNLSVIAEGVGSVPPREIDEYAADLSNIEDVKEVAAPTGAFIRGMKVGPS HHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC ASATGIKNDTALFTVQTAAKPYTEAAERQLDAIHALPGPADVLVRIGGGAQLDRDAVDGI CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCHHHHHHH VHKLPLVLAIIAVVTFVLLFLLTGSVVLPIKALVLNVLSLTATFGALIWIFQEGHLGGFG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC TEVTGTIVATMPMLLFCIAFGLSMDYEVFLISRIREYWMASGRTRADNDEAVALGVARTG CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHCC RVVTAAALIMAIAFAALMAAQVSFMRMFGTGLTIAILVDATIIRMLLVPSFMRLLGRFNW HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC WAPKPLVTLHERIGFSD CCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]