| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169628373
Identifier: 169628373
GI number: 169628373
Start: 1285321
End: 1286613
Strand: Reverse
Name: 169628373
Synonym: MAB_1280c
Alternate gene names: NA
Gene position: 1286613-1285321 (Counterclockwise)
Preceding gene: 169628374
Following gene: 169628369
Centisome position: 25.39
GC content: 66.43
Gene sequence:
>1293_bases GTGGGGAAGAAGCAGATCCAGAAGGAACACTGGGAAGGCCACGACCACCAGTCGATCTACAACGCCGCCCAGGCTTTCCA GACCGGCAACCCGCAGGCAGCACAGGAATCGATCAACAGCATCGCCGAGCAACTGGGCGACATCATGCACACGCTCGGCG GCAAGGTGCAGGGCATTCTGGTCGAGGACTGGCGCGGGGCAGCCGCGAAATCCCTACAGGCCAACATGTCCGAGTATTTC CGAGCCTCGGAGAGGGGCATCATCAGCATTCGGCACGTGGCCGACAGAATGCCCCCTCTTGCCGACGCGATGAGCGCCGC CAAGCGGAGCATCGAGCCGCCGATGTCCGACGCCCAGATCTCGCAGCTCAAGAAGTCCGGATCGTCGGACGCCGACATAC AGCAGCGGAAAAACCAAGAGCAGTTCTTTGCACGCCTTCAGATGGTCGGCCTGTTCAGCGAACCAGTGGTGCGCGAAGGT GACAACGTCACCGATGTTCGTCCCCCGCAAGGCAATAACCCTGGAAACATCACGCTTCAGCAACCCGCCAACGGATCCGA ATCCGGCACCGGCGGCGGTGGCGGAGGCGGCCAAAACGGCGGCGGCTCAGGCGGCGGTCAGGGCTCGGGCGATCTGAGCA AGCTCACCGACGGACTCGCCGACAAGAACACCAAGCCCGCCTTCAGCGATGGCTCGGGCAATCAAAGCGGACAAGGCCAG GGCGCAGGTGCCGGTAGCGGCAGTGGTGCGGGCGGCGGCAGCCCCCAAAGTGGTTCCGGCGGTTCGGGCAGCGGTCTGGG CAACGCCCTCAGCGGTCTTGGTGGCAGCTCAGATAAGACCGGCTCCGGTCTGCCGTTGGGTAGCACCACCGCGGCCGGTT ACAGCTCGCCCTCCAGCTCAGGTTCAGGCGCCGGTACCCTCAGCGGCCCAGGCGCATTGCGCGGCGGCGCGGGCGTTCCC GGCCTCGGCGGCGGAGCGGGAACAAACCCCACCGGCATCGGTGGCGCCGGAGTCCGCGGCGGCGCAATGGGCATGGGCGG CATGGGCATGGCCCCAATGGGCGGTGCGCACGGGCGCGGCGGCCACGGCGAAGAGGACGACGAACACCAGACCCCGGAGT TCCTGATCAACTGGGACAACGGCAACGAGCTGTTCGGCGATCTGCCCAAGGCATCCCCCGGCGTCATCGGCGACTGGAGC GAGCACGAACGCGCCGAAAAGCAGCGCCGCGAGTCGGAGAAGCGCCGCTACAAGTCCATGGGCTGGAACGTCGACTTCGG CGACGACGACTAG
Upstream 100 bases:
>100_bases AACCGAGCAGCACTACGACCAATGCCCGCTGGCCCTGCAAATCATGAAGCAGATCGAGCCGAAAATACCTTAGAGCCAAT AGTTTTCAGGAGGAGAAGAC
Downstream 100 bases:
>100_bases GAGCCAGCCTGCGCCTTGGCCACCGCCTCCCGGGCGACGGCCACATCGAGCTTGCGCATCTGCATCATGGCCTGCATGGC GGCATTCCCCGTCACTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MGKKQIQKEHWEGHDHQSIYNAAQAFQTGNPQAAQESINSIAEQLGDIMHTLGGKVQGILVEDWRGAAAKSLQANMSEYF RASERGIISIRHVADRMPPLADAMSAAKRSIEPPMSDAQISQLKKSGSSDADIQQRKNQEQFFARLQMVGLFSEPVVREG DNVTDVRPPQGNNPGNITLQQPANGSESGTGGGGGGGQNGGGSGGGQGSGDLSKLTDGLADKNTKPAFSDGSGNQSGQGQ GAGAGSGSGAGGGSPQSGSGGSGSGLGNALSGLGGSSDKTGSGLPLGSTTAAGYSSPSSSGSGAGTLSGPGALRGGAGVP GLGGGAGTNPTGIGGAGVRGGAMGMGGMGMAPMGGAHGRGGHGEEDDEHQTPEFLINWDNGNELFGDLPKASPGVIGDWS EHERAEKQRRESEKRRYKSMGWNVDFGDDD
Sequences:
>Translated_430_residues MGKKQIQKEHWEGHDHQSIYNAAQAFQTGNPQAAQESINSIAEQLGDIMHTLGGKVQGILVEDWRGAAAKSLQANMSEYF RASERGIISIRHVADRMPPLADAMSAAKRSIEPPMSDAQISQLKKSGSSDADIQQRKNQEQFFARLQMVGLFSEPVVREG DNVTDVRPPQGNNPGNITLQQPANGSESGTGGGGGGGQNGGGSGGGQGSGDLSKLTDGLADKNTKPAFSDGSGNQSGQGQ GAGAGSGSGAGGGSPQSGSGGSGSGLGNALSGLGGSSDKTGSGLPLGSTTAAGYSSPSSSGSGAGTLSGPGALRGGAGVP GLGGGAGTNPTGIGGAGVRGGAMGMGGMGMAPMGGAHGRGGHGEEDDEHQTPEFLINWDNGNELFGDLPKASPGVIGDWS EHERAEKQRRESEKRRYKSMGWNVDFGDDD >Mature_429_residues GKKQIQKEHWEGHDHQSIYNAAQAFQTGNPQAAQESINSIAEQLGDIMHTLGGKVQGILVEDWRGAAAKSLQANMSEYFR ASERGIISIRHVADRMPPLADAMSAAKRSIEPPMSDAQISQLKKSGSSDADIQQRKNQEQFFARLQMVGLFSEPVVREGD NVTDVRPPQGNNPGNITLQQPANGSESGTGGGGGGGQNGGGSGGGQGSGDLSKLTDGLADKNTKPAFSDGSGNQSGQGQG AGAGSGSGAGGGSPQSGSGGSGSGLGNALSGLGGSSDKTGSGLPLGSTTAAGYSSPSSSGSGAGTLSGPGALRGGAGVPG LGGGAGTNPTGIGGAGVRGGAMGMGGMGMAPMGGAHGRGGHGEEDDEHQTPEFLINWDNGNELFGDLPKASPGVIGDWSE HERAEKQRRESEKRRYKSMGWNVDFGDDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43228; Mature: 43097
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKQIQKEHWEGHDHQSIYNAAQAFQTGNPQAAQESINSIAEQLGDIMHTLGGKVQGIL CCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE VEDWRGAAAKSLQANMSEYFRASERGIISIRHVADRMPPLADAMSAAKRSIEPPMSDAQI EECCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHH SQLKKSGSSDADIQQRKNQEQFFARLQMVGLFSEPVVREGDNVTDVRPPQGNNPGNITLQ HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCEEEE QPANGSESGTGGGGGGGQNGGGSGGGQGSGDLSKLTDGLADKNTKPAFSDGSGNQSGQGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC GAGAGSGSGAGGGSPQSGSGGSGSGLGNALSGLGGSSDKTGSGLPLGSTTAAGYSSPSSS CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSGAGTLSGPGALRGGAGVPGLGGGAGTNPTGIGGAGVRGGAMGMGGMGMAPMGGAHGRG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GHGEEDDEHQTPEFLINWDNGNELFGDLPKASPGVIGDWSEHERAEKQRRESEKRRYKSM CCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GWNVDFGDDD CCCCCCCCCC >Mature Secondary Structure GKKQIQKEHWEGHDHQSIYNAAQAFQTGNPQAAQESINSIAEQLGDIMHTLGGKVQGIL CHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE VEDWRGAAAKSLQANMSEYFRASERGIISIRHVADRMPPLADAMSAAKRSIEPPMSDAQI EECCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHH SQLKKSGSSDADIQQRKNQEQFFARLQMVGLFSEPVVREGDNVTDVRPPQGNNPGNITLQ HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCEEEE QPANGSESGTGGGGGGGQNGGGSGGGQGSGDLSKLTDGLADKNTKPAFSDGSGNQSGQGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC GAGAGSGSGAGGGSPQSGSGGSGSGLGNALSGLGGSSDKTGSGLPLGSTTAAGYSSPSSS CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSGAGTLSGPGALRGGAGVPGLGGGAGTNPTGIGGAGVRGGAMGMGGMGMAPMGGAHGRG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GHGEEDDEHQTPEFLINWDNGNELFGDLPKASPGVIGDWSEHERAEKQRRESEKRRYKSM CCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GWNVDFGDDD CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA