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The map label for this gene is mmgC [H]

Identifier: 169628281

GI number: 169628281

Start: 1200921

End: 1202069

Strand: Reverse

Name: mmgC [H]

Synonym: MAB_1188c

Alternate gene names: 169628281

Gene position: 1202069-1200921 (Counterclockwise)

Preceding gene: 169628282

Following gene: 169628280

Centisome position: 23.72

GC content: 64.66

Gene sequence:

>1149_bases
ATGTTCAATCTCACCGAAGAACAGCGTGAAATCTGGAATACGGCAAGGGAGTTCGCCGATATCCACATCGCGCCGCACGC
GCTGGACTGGGACCGTGACAAGTACTTCCCGGTCGAGATTTTTCCCAAGGCAGCGGCGCTGGGCATGGGCGGTATCTACG
TCAACCCCGATGTCGGTGGCTCCGGGCTCACCCGCTTGGACGCGTCGTTGATCTTCGAGGCCATGGCCACCGGGTGCTCG
GCCGTCTCGGCTTTCATCTCCATCCACAACATGGCCGCCTGGATGATCGACGAATTCGGCGACGAGGAGCAGCGCCGACG
CTGGTTGCCCTCGATGTGCACGATGGAGACGATCGGGGCGTACTGCCTCACCGAGCCCGAATGCGGCAGTGACGCGGCTG
CCTTGCGGACCAGCGCGATTCGCCAGGGTGACGAGTACGTGCTCAACGGCGTCAAGCAGTTCATCTCCGGCGCCGGGGCC
GCAGACCTCTACGTGGTGATGGCCCGTACGGGTGGCCCCGGACCACGGGGCATCTCCACCATCGTGGTGCCCAAGGGCAC
TCCCGGCCTGTCCTTCGGCGCTCCCGAACGCAAGATGGGTTGGCACGCCCAACCCACCGCACAGGTCGTCTTCGAGGATG
TCCGGGTGCCGGTGGCCAACCGCATCGGCGAGGAGGGCATCGGATTCACCATCGCGATGCGCGGCCTCAATGGCGGCCGG
CTCAATATCGCGTCCTGCTCACTGGGCGGGGCCCGCTCGGCACTGGAAAAGGTCATCGAGTACCTGCGCACCCGTAAGGC
GTTCGGTGAGGAGTTGATCAAGTTCCAGGCGCTGCAGTTCCGGCTCGCGGACATGGCCACCGAGCTGGAGGCCGCCCGCA
CCATGGTGTGGCGTGCGGCGGCCGCGGTGACCGAGGGCGATCCGCGCGCGGCCGAACTGTGTGCCATGGCCAAACGCATC
GCCACTGACGTAGGTTTCACGGTGGCCAACGAGGCGCTGCAGCTGCACGGCGGCTACGGCTACCTGGCCGAGTACGGCAT
CGAGAAGATCGTGCGTGACCTACGGGTACACCAAATCCTGGAAGGAACCAACGAGATCATGCGAGTCATCGTGTCCCGCA
AGTTGATAGAACAGGGGCTTCCGGCGTGA

Upstream 100 bases:

>100_bases
CGGTTCTACACCAAGACCAAGACGGTGACGCAACGCTGGCCGTCGGGTATCAAGGAGGGCGCCTCCTTCGTGATCCCGAC
CATGGATTGAGCGAACATCC

Downstream 100 bases:

>100_bases
CGGATCAGATCGAAACCCGGGTCGAGAAGGGGGTCGGCCTGCTGACGCTGAACCGTCCCAAGGCCATCAACTCGCTCACC
TACGACATGATCGCGGCGAT

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MFNLTEEQREIWNTAREFADIHIAPHALDWDRDKYFPVEIFPKAAALGMGGIYVNPDVGGSGLTRLDASLIFEAMATGCS
AVSAFISIHNMAAWMIDEFGDEEQRRRWLPSMCTMETIGAYCLTEPECGSDAAALRTSAIRQGDEYVLNGVKQFISGAGA
ADLYVVMARTGGPGPRGISTIVVPKGTPGLSFGAPERKMGWHAQPTAQVVFEDVRVPVANRIGEEGIGFTIAMRGLNGGR
LNIASCSLGGARSALEKVIEYLRTRKAFGEELIKFQALQFRLADMATELEAARTMVWRAAAAVTEGDPRAAELCAMAKRI
ATDVGFTVANEALQLHGGYGYLAEYGIEKIVRDLRVHQILEGTNEIMRVIVSRKLIEQGLPA

Sequences:

>Translated_382_residues
MFNLTEEQREIWNTAREFADIHIAPHALDWDRDKYFPVEIFPKAAALGMGGIYVNPDVGGSGLTRLDASLIFEAMATGCS
AVSAFISIHNMAAWMIDEFGDEEQRRRWLPSMCTMETIGAYCLTEPECGSDAAALRTSAIRQGDEYVLNGVKQFISGAGA
ADLYVVMARTGGPGPRGISTIVVPKGTPGLSFGAPERKMGWHAQPTAQVVFEDVRVPVANRIGEEGIGFTIAMRGLNGGR
LNIASCSLGGARSALEKVIEYLRTRKAFGEELIKFQALQFRLADMATELEAARTMVWRAAAAVTEGDPRAAELCAMAKRI
ATDVGFTVANEALQLHGGYGYLAEYGIEKIVRDLRVHQILEGTNEIMRVIVSRKLIEQGLPA
>Mature_382_residues
MFNLTEEQREIWNTAREFADIHIAPHALDWDRDKYFPVEIFPKAAALGMGGIYVNPDVGGSGLTRLDASLIFEAMATGCS
AVSAFISIHNMAAWMIDEFGDEEQRRRWLPSMCTMETIGAYCLTEPECGSDAAALRTSAIRQGDEYVLNGVKQFISGAGA
ADLYVVMARTGGPGPRGISTIVVPKGTPGLSFGAPERKMGWHAQPTAQVVFEDVRVPVANRIGEEGIGFTIAMRGLNGGR
LNIASCSLGGARSALEKVIEYLRTRKAFGEELIKFQALQFRLADMATELEAARTMVWRAAAAVTEGDPRAAELCAMAKRI
ATDVGFTVANEALQLHGGYGYLAEYGIEKIVRDLRVHQILEGTNEIMRVIVSRKLIEQGLPA

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI7656849, Length=375, Percent_Identity=61.0666666666667, Blast_Score=489, Evalue=1e-138,
Organism=Homo sapiens, GI4557233, Length=375, Percent_Identity=38.6666666666667, Blast_Score=260, Evalue=2e-69,
Organism=Homo sapiens, GI187960098, Length=381, Percent_Identity=37.007874015748, Blast_Score=259, Evalue=4e-69,
Organism=Homo sapiens, GI4557231, Length=381, Percent_Identity=37.007874015748, Blast_Score=258, Evalue=4e-69,
Organism=Homo sapiens, GI4501859, Length=374, Percent_Identity=36.3636363636364, Blast_Score=242, Evalue=5e-64,
Organism=Homo sapiens, GI226958412, Length=376, Percent_Identity=34.3085106382979, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI4557235, Length=335, Percent_Identity=35.8208955223881, Blast_Score=212, Evalue=6e-55,
Organism=Homo sapiens, GI4501857, Length=369, Percent_Identity=34.1463414634146, Blast_Score=211, Evalue=8e-55,
Organism=Homo sapiens, GI76496475, Length=335, Percent_Identity=35.8208955223881, Blast_Score=211, Evalue=9e-55,
Organism=Homo sapiens, GI226958414, Length=339, Percent_Identity=33.9233038348083, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI21361497, Length=350, Percent_Identity=34, Blast_Score=198, Evalue=8e-51,
Organism=Homo sapiens, GI4503943, Length=377, Percent_Identity=28.3819628647215, Blast_Score=131, Evalue=9e-31,
Organism=Homo sapiens, GI7669494, Length=349, Percent_Identity=28.6532951289398, Blast_Score=121, Evalue=9e-28,
Organism=Homo sapiens, GI211971008, Length=401, Percent_Identity=27.930174563591, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI48976061, Length=401, Percent_Identity=27.930174563591, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI38505218, Length=338, Percent_Identity=29.2899408284024, Blast_Score=115, Evalue=8e-26,
Organism=Escherichia coli, GI87081958, Length=386, Percent_Identity=30.3108808290155, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1786223, Length=381, Percent_Identity=27.0341207349081, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI87082384, Length=270, Percent_Identity=28.8888888888889, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI87081702, Length=272, Percent_Identity=26.1029411764706, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17533517, Length=377, Percent_Identity=49.3368700265252, Blast_Score=404, Evalue=1e-113,
Organism=Caenorhabditis elegans, GI17569725, Length=379, Percent_Identity=36.1477572559367, Blast_Score=259, Evalue=2e-69,
Organism=Caenorhabditis elegans, GI17534899, Length=381, Percent_Identity=36.745406824147, Blast_Score=258, Evalue=3e-69,
Organism=Caenorhabditis elegans, GI17570075, Length=384, Percent_Identity=35.4166666666667, Blast_Score=235, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI17508101, Length=373, Percent_Identity=35.1206434316354, Blast_Score=224, Evalue=6e-59,
Organism=Caenorhabditis elegans, GI17506239, Length=377, Percent_Identity=34.2175066312997, Blast_Score=220, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI71985184, Length=381, Percent_Identity=30.1837270341207, Blast_Score=204, Evalue=9e-53,
Organism=Caenorhabditis elegans, GI17538396, Length=379, Percent_Identity=31.3984168865435, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI71990804, Length=277, Percent_Identity=37.5451263537906, Blast_Score=184, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI17505929, Length=356, Percent_Identity=32.8651685393258, Blast_Score=177, Evalue=8e-45,
Organism=Caenorhabditis elegans, GI17551932, Length=373, Percent_Identity=30.5630026809651, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI71982178, Length=275, Percent_Identity=32.7272727272727, Blast_Score=164, Evalue=8e-41,
Organism=Caenorhabditis elegans, GI32563615, Length=230, Percent_Identity=36.0869565217391, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI71985192, Length=315, Percent_Identity=29.5238095238095, Blast_Score=153, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17534353, Length=375, Percent_Identity=27.2, Blast_Score=139, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17562446, Length=316, Percent_Identity=30.6962025316456, Blast_Score=130, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI17531909, Length=240, Percent_Identity=30.8333333333333, Blast_Score=100, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI86563381, Length=333, Percent_Identity=26.1261261261261, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI86563383, Length=333, Percent_Identity=26.1261261261261, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21356377, Length=377, Percent_Identity=34.2175066312997, Blast_Score=248, Evalue=7e-66,
Organism=Drosophila melanogaster, GI24660351, Length=380, Percent_Identity=35.5263157894737, Blast_Score=245, Evalue=5e-65,
Organism=Drosophila melanogaster, GI24646207, Length=376, Percent_Identity=37.5, Blast_Score=243, Evalue=2e-64,
Organism=Drosophila melanogaster, GI24666513, Length=372, Percent_Identity=34.6774193548387, Blast_Score=221, Evalue=8e-58,
Organism=Drosophila melanogaster, GI21355753, Length=384, Percent_Identity=32.8125, Blast_Score=210, Evalue=1e-54,
Organism=Drosophila melanogaster, GI281363737, Length=385, Percent_Identity=31.6883116883117, Blast_Score=201, Evalue=8e-52,
Organism=Drosophila melanogaster, GI19920834, Length=378, Percent_Identity=29.3650793650794, Blast_Score=136, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41548; Mature: 41548

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNLTEEQREIWNTAREFADIHIAPHALDWDRDKYFPVEIFPKAAALGMGGIYVNPDVGG
CCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEECCCHHHHCCCCEEECCCCCC
SGLTRLDASLIFEAMATGCSAVSAFISIHNMAAWMIDEFGDEEQRRRWLPSMCTMETIGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHCH
YCLTEPECGSDAAALRTSAIRQGDEYVLNGVKQFISGAGAADLYVVMARTGGPGPRGIST
HCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEE
IVVPKGTPGLSFGAPERKMGWHAQPTAQVVFEDVRVPVANRIGEEGIGFTIAMRGLNGGR
EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCCCCE
LNIASCSLGGARSALEKVIEYLRTRKAFGEELIKFQALQFRLADMATELEAARTMVWRAA
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVTEGDPRAAELCAMAKRIATDVGFTVANEALQLHGGYGYLAEYGIEKIVRDLRVHQIL
HHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
EGTNEIMRVIVSRKLIEQGLPA
HHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFNLTEEQREIWNTAREFADIHIAPHALDWDRDKYFPVEIFPKAAALGMGGIYVNPDVGG
CCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEECCCHHHHCCCCEEECCCCCC
SGLTRLDASLIFEAMATGCSAVSAFISIHNMAAWMIDEFGDEEQRRRWLPSMCTMETIGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHCH
YCLTEPECGSDAAALRTSAIRQGDEYVLNGVKQFISGAGAADLYVVMARTGGPGPRGIST
HCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEE
IVVPKGTPGLSFGAPERKMGWHAQPTAQVVFEDVRVPVANRIGEEGIGFTIAMRGLNGGR
EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCCCCE
LNIASCSLGGARSALEKVIEYLRTRKAFGEELIKFQALQFRLADMATELEAARTMVWRAA
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVTEGDPRAAELCAMAKRIATDVGFTVANEALQLHGGYGYLAEYGIEKIVRDLRVHQIL
HHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
EGTNEIMRVIVSRKLIEQGLPA
HHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]